; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012033 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012033
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold1:1316519..1318528
RNA-Seq ExpressionSpg012033
SyntenySpg012033
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]9.7e-9667.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSN+LRKLR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +GQC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YE++TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.9e-9668.61Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLRKLR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +GQC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]2.2e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLRKLR+V C+ ISDEG  +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]7.4e-9668.25Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YIT SSNQLRKLR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +GQC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]9.0e-10270.4Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M SN +IQS+  ARN LDLPA++ S ILLKLGAIEIL+SAQ VCSSWR+ICKDPLMWR IDMRN G+ +D+ H+L+IMCRHA+DRSCGQLIDINIEYFGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ
        D+LLQYIT SSNQLR+LR+  C  ISDEGL+EA  +LPLLEHLEI + SFDV TLK VG+C PLLK LKL ++       V + EA+AIAETMPKLRHLQ
Subjt:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ

Query:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS-TDGYEFTTE-INFW-YDSEDD
        I GNGLTN GLQAILDGCPDL+SLDLRQCF+L L GQL K CAE  K+LHLPHD  T+G+E T + I+F  +DSED+
Subjt:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS-TDGYEFTTE-INFW-YDSEDD

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like2.3e-9567.65Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M SNP+  S   ARN L+LPAD+TS ILLKLGAIEILSSAQ VCS WR+ICKDPLMWR +DM N+G++ D+ ++L+ MC  A+DRSCG+LIDINI+YFGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ
        ++LLQYIT SSNQLR+LRIV C SI+D GLSEA  KLPLLEHLEISLCSF  +TL+ VG+C  LLKSLKL+ Q CR      D +A+AIAE MP LR+LQ
Subjt:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQ

Query:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEINFWYDSE
        IFG+ LT+RGLQAILDGCPDL+SLDLRQCFNL L GQL   CAE IK L LPHD TD YEF  E + + D +
Subjt:  IFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEINFWYDSE

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.4e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI I IE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR+LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +GQC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.4e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI I IE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLR+LR+V C+ ISDEGL +A  KLPLLE LEIS  SFDV TL+ +GQC PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6J1ILH5 F-box protein SKIP19-like1.0e-9567.88Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        NS+P    +  ARN L+LPAD+TS ILLKLG ++IL++AQ VCSSWR+IC+DPLMWR +DMR  GD+ D+ ++L+ MCR A+DRSCGQLI INIE+FGTD
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLLQYIT SSNQLRKLR+V C+ ISDEG  +A  KLPLLE LEIS  SFDV TL+ +G C PLLKSLKLN+QF   RR   D  A+AIAE MP LRHLQI
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD
        FGN LTNRGL+AILDGCPDL+SLDLRQCFNL LAGQL  +C+E IK L LPHD TD YEF+TEI  +  D E+D
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEI-NFWYDSEDD

A0A6P3ZH66 F-box protein SKIP191.8e-9264.62Show/hide
Query:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT
        M S+P    +   RN L+LP D+TSTIL +LGAIEIL+SAQ VCSSWR ICKDPLMWR IDMRN GD + + ++L+ MCRHAID SCGQL+DINIE+FGT
Subjt:  MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGT

Query:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRR---VGDAEAVAIAETMPKLR
        D+LL+Y+T  S+ +R+LR++ C SISD GLSEAA KLPLLE LEIS  S     L+ +G C PLLKSLKLN   CRG R      D EAVAIA++MP+LR
Subjt:  DDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRR---VGDAEAVAIAETMPKLR

Query:  HLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEINFWYDSEDD
        HLQ+FGN LTN GLQAILDGCP L+SLDLRQCFN+ LAG L KRCAE IK L  P+DST+GYEF   I+  YD +DD
Subjt:  HLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEINFWYDSEDD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.8e-6048.26Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD
        P+++ + +  N  +LP DL S+ILL+L  +EIL +A+ VC SWRR+ KDPL+WR IDMRNL   + IY  ++  CRH +D S G L++ NI+   F T  
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD

Query:  LLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF
        LL Y+   S+ LR+LR V    I+  G+ EA  KLPLLE LE+  CS +    K +GQ  P LK+LKL   +        D +A+AIA+TMP L HLQ+ 
Subjt:  LLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF
         NGLTN GL AILDGCP L+ LDLRQCFN+ L G LE++C E IK    P+D  D Y +
Subjt:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF

Q9M0U7 Putative F-box protein At4g054751.1e-5746.77Show/hide
Query:  NLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSNQL
        N +DLP +LT++ILL+L   +IL +A+ +C +WRRICKDP MWR I++R+   +     + + MCRH +D S G L++INIE+F +D LL YI   S  L
Subjt:  NLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSNQL

Query:  RKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIFGN
        + L I     ++++G+     KLPLLE L I   S  +  LK +G   P LK+LKLN    +      +VG       D +A+AIAE+MPKLRHLQ+ GN
Subjt:  RKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIFGN

Query:  GLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEIN
        GLTN GL AILDGCP L+  LD+R+CFN+ L G LEKRC + IK L  PHDST  Y ++  ++
Subjt:  GLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEIN

Q9M0U9 F-box protein SKIP191.5e-7857.09Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        +S P       + N  +LP +LTS IL +LGAIEIL +AQ VC SWRR+CKDP MWR IDM NLGD  D+ +NL+IMCRHA+DRS G L+DI I YFGT 
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YI   S+ LR LR++ CS I+D+G  EA  KLP LE LE+S CSF V +L++VGQC   +K+LKLNK      ++  D +A+AIAETMPKLRHLQ+
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS
         GNGL++ GL AILD C +L+ LDLR+CFN+ L G L+KRC E++K++  P+DS
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS

Q9S9V8 Putative F-box/LRR-repeat protein 91.4e-5748.57Show/hide
Query:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMR---NLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIE
        +S+P  Q+ +    RN  +LP +LTS+ILL+LGAIEIL +AQ VC SWRR+C+DP MWR ID+R   NL +  ++++ ++ +C  A+D S G L++INI+
Subjt:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMR---NLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIE

Query:  YFGTDDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISL-CSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK
        Y      L YI   S+ LR+L +V C+ +   G+ EAA KLPLLE L+I+   S   + LK+VGQ  P L++LKLN   C G  +  D  A+AIAETMP 
Subjt:  YFGTDDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISL-CSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK

Query:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK
        LRHLQ+F NGL+  GL AIL+GCP LK+L L QC N+ + G + K
Subjt:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK

Q9S9V9 Putative F-box/LRR-repeat protein 231.6e-7253.94Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLL
        P +   ++ RN  +LP+ LTS+ILL+LGAIEIL +AQ VC  W R+CKDP MWR ID+ N  D     ++L+ MCRHA+DRS G LI+I I Y+GT+DL+
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLL

Query:  QYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVG-DAEAVAIAETMPKLRHLQIFG
         YI   S+ L+ L +V C  I+DEG+++A  K+PLLE+LE+S C F   +L+ +G+  P LK+LKLN+         G D  A AIAE+MP+LRHLQ+ G
Subjt:  QYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVG-DAEAVAIAETMPKLRHLQIFG

Query:  NGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTD
        NGLTN+GL AILDGCP L+ LDLRQCFN+ L G L+KRC E IK L  P+DS D
Subjt:  NGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein1.0e-7957.09Show/hide
Query:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD
        +S P       + N  +LP +LTS IL +LGAIEIL +AQ VC SWRR+CKDP MWR IDM NLGD  D+ +NL+IMCRHA+DRS G L+DI I YFGT 
Subjt:  NSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTD

Query:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI
        DLL YI   S+ LR LR++ CS I+D+G  EA  KLP LE LE+S CSF V +L++VGQC   +K+LKLNK      ++  D +A+AIAETMPKLRHLQ+
Subjt:  DLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQI

Query:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS
         GNGL++ GL AILD C +L+ LDLR+CFN+ L G L+KRC E++K++  P+DS
Subjt:  FGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDS

AT4G05470.1 RNI-like superfamily protein9.8e-5445.72Show/hide
Query:  RRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDI--MCRHAIDRSCGQLIDINI-EYFGTDDLLQYI
        +  RN +DLP +LT++ILL+L   +IL +AQ VC  WRRICKDP MWR I+ R+      + +N D   MCRH +D S G L++IN+ E+F +D LL YI
Subjt:  RRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDI--MCRHAIDRSCGQLIDINI-EYFGTDDLLQYI

Query:  TWSSNQLRKLRIVSC-SSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN----------KQFCRGRRRVG----DAEAVAIAET
        T     LR L +  C   ++  G+  A  K+PLLE LE++     +  LK +G   P LK+LKLN          K        +G    D +A+AIAE+
Subjt:  TWSSNQLRKLRIVSC-SSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN----------KQFCRGRRRVG----DAEAVAIAET

Query:  MPKLRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF
        MPKL HLQ+  N LTN GL AILDGCP L+ LD+R+CF + L G LEKRC E IK L  P DST  Y +
Subjt:  MPKLRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF

AT4G05475.1 RNI-like superfamily protein7.7e-5946.77Show/hide
Query:  NLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSNQL
        N +DLP +LT++ILL+L   +IL +A+ +C +WRRICKDP MWR I++R+   +     + + MCRH +D S G L++INIE+F +D LL YI   S  L
Subjt:  NLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWSSNQL

Query:  RKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIFGN
        + L I     ++++G+     KLPLLE L I   S  +  LK +G   P LK+LKLN    +      +VG       D +A+AIAE+MPKLRHLQ+ GN
Subjt:  RKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLN---KQFCRGRRRVG-------DAEAVAIAETMPKLRHLQIFGN

Query:  GLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEIN
        GLTN GL AILDGCP L+  LD+R+CFN+ L G LEKRC + IK L  PHDST  Y ++  ++
Subjt:  GLTNRGLQAILDGCPDLKS-LDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEIN

AT4G05490.1 RNI-like superfamily protein1.3e-6148.26Show/hide
Query:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD
        P+++ + +  N  +LP DL S+ILL+L  +EIL +A+ VC SWRR+ KDPL+WR IDMRNL   + IY  ++  CRH +D S G L++ NI+   F T  
Subjt:  PMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEY--FGTDD

Query:  LLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF
        LL Y+   S+ LR+LR V    I+  G+ EA  KLPLLE LE+  CS +    K +GQ  P LK+LKL   +        D +A+AIA+TMP L HLQ+ 
Subjt:  LLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIF

Query:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF
         NGLTN GL AILDGCP L+ LDLRQCFN+ L G LE++C E IK    P+D  D Y +
Subjt:  GNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEF

AT4G05497.1 RNI-like superfamily protein1.0e-5848.57Show/hide
Query:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMR---NLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIE
        +S+P  Q+ +    RN  +LP +LTS+ILL+LGAIEIL +AQ VC SWRR+C+DP MWR ID+R   NL +  ++++ ++ +C  A+D S G L++INI+
Subjt:  NSNPMIQSKRRA--RNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMR---NLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIE

Query:  YFGTDDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISL-CSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK
        Y      L YI   S+ LR+L +V C+ +   G+ EAA KLPLLE L+I+   S   + LK+VGQ  P L++LKLN   C G  +  D  A+AIAETMP 
Subjt:  YFGTDDLLQYITWSSNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISL-CSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPK

Query:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK
        LRHLQ+F NGL+  GL AIL+GCP LK+L L QC N+ + G + K
Subjt:  LRHLQIFGNGLTNRGLQAILDGCPDLKSLDLRQCFNLRLAGQLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGAACCCTATGATTCAGTCGAAAAGGCGAGCGAGGAATTTGCTTGATCTTCCTGCAGATTTAACGTCTACGATTCTGCTGAAGCTAGGCGCCATTGAAATCCT
CTCCAGCGCCCAATACGTCTGCTCTTCGTGGCGTAGGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCGCAATTTGGGTGATTTCCATGATATATATCACA
ATTTGGACATTATGTGCAGGCACGCCATTGACCGTAGTTGTGGCCAATTGATCGACATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCAGTACATCACTTGGAGT
TCAAATCAACTTAGAAAACTTCGAATCGTAAGTTGTTCTAGCATCTCAGATGAGGGATTGTCTGAAGCAGCTTTTAAACTTCCATTGTTGGAGCATCTTGAAATATCTCT
CTGTTCATTTGATGTGAGAACTTTGAAAATTGTTGGACAGTGTAGTCCTCTTTTGAAATCGCTGAAACTGAACAAACAGTTCTGCAGAGGACGACGGAGGGTAGGCGACG
CGGAGGCCGTTGCTATTGCTGAAACTATGCCCAAGTTACGACACCTTCAGATATTTGGCAATGGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGCTGTCCTGAT
TTAAAATCTCTCGACTTACGCCAGTGTTTCAACTTGAGATTGGCAGGACAGTTGGAAAAAAGATGTGCTGAAACGATCAAAATTTTGCATCTGCCTCACGATTCCACTGA
TGGCTATGAATTTACCACAGAAATTAATTTTTGGTATGATTCTGAAGATGATTTATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGAACCCTATGATTCAGTCGAAAAGGCGAGCGAGGAATTTGCTTGATCTTCCTGCAGATTTAACGTCTACGATTCTGCTGAAGCTAGGCGCCATTGAAATCCT
CTCCAGCGCCCAATACGTCTGCTCTTCGTGGCGTAGGATCTGCAAGGACCCTCTCATGTGGCGTGCCATCGATATGCGCAATTTGGGTGATTTCCATGATATATATCACA
ATTTGGACATTATGTGCAGGCACGCCATTGACCGTAGTTGTGGCCAATTGATCGACATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCAGTACATCACTTGGAGT
TCAAATCAACTTAGAAAACTTCGAATCGTAAGTTGTTCTAGCATCTCAGATGAGGGATTGTCTGAAGCAGCTTTTAAACTTCCATTGTTGGAGCATCTTGAAATATCTCT
CTGTTCATTTGATGTGAGAACTTTGAAAATTGTTGGACAGTGTAGTCCTCTTTTGAAATCGCTGAAACTGAACAAACAGTTCTGCAGAGGACGACGGAGGGTAGGCGACG
CGGAGGCCGTTGCTATTGCTGAAACTATGCCCAAGTTACGACACCTTCAGATATTTGGCAATGGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGCTGTCCTGAT
TTAAAATCTCTCGACTTACGCCAGTGTTTCAACTTGAGATTGGCAGGACAGTTGGAAAAAAGATGTGCTGAAACGATCAAAATTTTGCATCTGCCTCACGATTCCACTGA
TGGCTATGAATTTACCACAGAAATTAATTTTTGGTATGATTCTGAAGATGATTTATGGTGA
Protein sequenceShow/hide protein sequence
MNSNPMIQSKRRARNLLDLPADLTSTILLKLGAIEILSSAQYVCSSWRRICKDPLMWRAIDMRNLGDFHDIYHNLDIMCRHAIDRSCGQLIDINIEYFGTDDLLQYITWS
SNQLRKLRIVSCSSISDEGLSEAAFKLPLLEHLEISLCSFDVRTLKIVGQCSPLLKSLKLNKQFCRGRRRVGDAEAVAIAETMPKLRHLQIFGNGLTNRGLQAILDGCPD
LKSLDLRQCFNLRLAGQLEKRCAETIKILHLPHDSTDGYEFTTEINFWYDSEDDLW