CuGenDBv2

Gene ID	Spg012035
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	scaffold1:667045..668963
RNA-Seq Expression	Spg012035
Synteny	Spg012035
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052446.1 hypothetical protein E6C27_scaffold120G00430 [Cucumis melo var. makuwa]

1.6e-25

91.78

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST+LNPHSLTLLSGFLAVISVNVVI +YIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKAD PS+A+NKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

KAG6581507.1 hypothetical protein SDJN03_21509, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-26

93.33

Show/hide

Query:  LCSTQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        L STQLNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+DPSQANNKKEE
Subjt:  LCSTQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

3.2e-26

94.52

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        STQLNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDP FLAEAKASINQSTGKAD PSQA NKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

1.1e-26

94.52

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        STQLNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+DPSQANNKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

9.3e-26

91.78

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST LNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDPAF+AEAKASINQ+ GKA+DPSQANNKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.6e-26

94.52

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        STQLNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDP FLAEAKASINQSTGKAD PSQA NKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

7.7e-26

91.78

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST+LNPHSLTLLSGFLAVISVNVVI +YIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKAD PS+A+NKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

7.7e-26

91.78

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST+LNPHSLTLLSGFLAVISVNVVI +YIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKAD PS+A+NKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

5.3e-27

94.52

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        STQLNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDPAF+AEAKASINQS GKA+DPSQANNKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.5e-26

91.78

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST LNPHSLTLLSGFLAVISVNVVIA+YIIMAMKEPSSKHEPDPAF+AEAKASINQ+ GKA+DPSQANNKKEE
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

5.5e-16

63.01

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE
        ST L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD AFLAEAK S+N+ T  A        KK+E
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

3.5e-15

58.33

Show/hide

Query:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKE
        ST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEP+ KH+PD +F+AEAK S+ + T    +   A  K+E
Subjt:  STQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATGCCCATTTTCCCAAAAGCACCCTCTGTTCAACACAATTAAATCCACATTCTCTTACACTCTTGAGTGGATTTCTTGCCGTCATATCAGTCAACGTTGTCATTGC
TCTTTATATTATAATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTCTTGCTGAGGCAAAAGCTAGTATAAACCAGTCTACTGGGAAAGCAGATG
ACCCCTCGCAAGCTAATAATAAGAAGGAAGAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYAHFPKSTLCSTQLNPHSLTLLSGFLAVISVNVVIALYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADDPSQANNKKEE

Spg012035 (gene) of Sponge gourd (cylindrica) v1 genome