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Spg012049 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012049
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:1032473..1032990
RNA-Seq ExpressionSpg012049
SyntenySpg012049
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581475.1 hypothetical protein SDJN03_21477, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5189.08Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        +IPIK VAAMA FLPLIVA+A+ALEIRPSEHGLEFQSPPPAG+KSSPEMRSFF GTSSP P+  LPLPK MNSSEAPGWWTHRDGGNKR+RNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYK
        CGITGVTLLVGSTLFYIYK
Subjt:  CGITGVTLLVGSTLFYIYK

XP_022925668.1 uncharacterized protein LOC111433017 [Cucurbita moschata]2.1e-5087.5Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        +IPIK VAAM  FLPLIVA+A+ALEIRPSEHGLEFQSPPPAG+KSSPEMRSFF GTSSP P+  LPLPK MNSSEAPGWWTHRDGGNKR+RNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CGITGVTLLVGSTLFYIYK+
Subjt:  CGITGVTLLVGSTLFYIYKL

XP_022926736.1 uncharacterized protein LOC111433768 [Cucurbita moschata]6.8e-4988.33Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MI IK +AAMA +L  IVAIAAALEIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSEAPGWWTHRDGG+KRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CGITGVTLLVGSTL+YI+K+
Subjt:  CGITGVTLLVGSTLFYIYKL

XP_023003567.1 uncharacterized protein LOC111497130 [Cucurbita maxima]4.0e-4987.5Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MI IK +AAMA +L  IVAI AALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSEAPGWWTHRDGG+KRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CG+TGVTLLVGSTL+YI+K+
Subjt:  CGITGVTLLVGSTLFYIYKL

XP_023518243.1 uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]4.7e-5089.17Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MI IK +AAMA +L  IVAIAAALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSEAPGWWTHRDGG+KRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CGITGVTLLVGSTL+YI+K+
Subjt:  CGITGVTLLVGSTLFYIYKL

TrEMBL top hitse value%identityAlignment
A0A0A0KM65 Uncharacterized protein2.4e-4783.19Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MIPIK  AA+ AF  LI +IAA  EIRPSEHGLEFQSPPP GDKSSPEMRSFFGG +SPTPEVALP+PK +NSSE+PGWW H DGGNKRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYK
        CGITGVTLLVGSTLFYI+K
Subjt:  CGITGVTLLVGSTLFYIYK

A0A6J1CZN3 uncharacterized protein LOC1110157293.4e-4682.26Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAA----ALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLV
        MIPIK+ AAMA  LPLIVA+ A    ALEIRPSEHGLEFQSPPPAGDKSSPEM SFFGG SSPTP+ ALPLPK MNSSEAPGWWT RDGG+ RLRNALLV
Subjt:  MIPIKVVAAMAAFLPLIVAIAA----ALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLV

Query:  ATAACGITGVTLLVGSTLFYIYKL
        ATAA GITGVTLLVGS LFY+YK+
Subjt:  ATAACGITGVTLLVGSTLFYIYKL

A0A6J1EFQ9 uncharacterized protein LOC1114337683.3e-4988.33Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MI IK +AAMA +L  IVAIAAALEIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSEAPGWWTHRDGG+KRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CGITGVTLLVGSTL+YI+K+
Subjt:  CGITGVTLLVGSTLFYIYKL

A0A6J1EFW4 uncharacterized protein LOC1114330171.0e-5087.5Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        +IPIK VAAM  FLPLIVA+A+ALEIRPSEHGLEFQSPPPAG+KSSPEMRSFF GTSSP P+  LPLPK MNSSEAPGWWTHRDGGNKR+RNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CGITGVTLLVGSTLFYIYK+
Subjt:  CGITGVTLLVGSTLFYIYKL

A0A6J1KMY3 uncharacterized protein LOC1114971301.9e-4987.5Show/hide
Query:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA
        MI IK +AAMA +L  IVAI AALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSEAPGWWTHRDGG+KRLRNALLVATAA
Subjt:  MIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKL
        CG+TGVTLLVGSTL+YI+K+
Subjt:  CGITGVTLLVGSTLFYIYKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein4.0e-0737Show/hide
Query:  IAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSS-PTPEVALPLPKVMNSS-EAPGWWTHRDGGNKRLRN-ALLVATAACGITGVTLLVGSTLFY
        I  A E+RPS+HGLE+   P      S EM SFFG  SS     ++ P   ++ S+ ++P     +D  + R+ N  L+V +  CG++GV L+V S L Y
Subjt:  IAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSS-PTPEVALPLPKVMNSS-EAPGWWTHRDGGNKRLRN-ALLVATAACGITGVTLLVGSTLFY

AT4G21740.1 unknown protein9.2e-1240Show/hide
Query:  FLPLIVAIAAALEIRPSEHGLEFQ-SPPPAGDKSSP-EMRSFFGG--TSSPTPEVALPLPK--VMNSSEAPGWWTHRDGGNKR----LRNALLVATAACG
        FL +    + A E+RPS+HGL++Q S PP    S P +M+SFFG   +SSP P     LPK    +  +   WW  RDG   R    +R+  L A+  CG
Subjt:  FLPLIVAIAAALEIRPSEHGLEFQ-SPPPAGDKSSP-EMRSFFGG--TSSPTPEVALPLPK--VMNSSEAPGWWTHRDGGNKR----LRNALLVATAACG

Query:  ITGVTLLVGSTLFYIYKLLK
        ++GV LLV  TL Y ++  K
Subjt:  ITGVTLLVGSTLFYIYKLLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGATTCCGATCAAGGTAGTGGCGGCGATGGCCGCGTTCTTGCCATTGATCGTGGCGATCGCGGCGGCGCTGGAGATACGGCCGTCGGAGCACGGGCTGGAGTT
TCAGAGCCCTCCGCCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCGTTCTTCGGAGGAACGTCGTCGCCGACACCGGAAGTGGCATTGCCGTTGCCGAAGGTGATGA
ATTCGAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAAACAAACGACTAAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATAACAGGTGTCACTTTA
TTAGTGGGTTCTACGTTATTCTACATTTATAAGCTGTTGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACGATGATTCCGATCAAGGTAGTGGCGGCGATGGCCGCGTTCTTGCCATTGATCGTGGCGATCGCGGCGGCGCTGGAGATACGGCCGTCGGAGCACGGGCTGGAGTT
TCAGAGCCCTCCGCCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCGTTCTTCGGAGGAACGTCGTCGCCGACACCGGAAGTGGCATTGCCGTTGCCGAAGGTGATGA
ATTCGAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAAACAAACGACTAAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATAACAGGTGTCACTTTA
TTAGTGGGTTCTACGTTATTCTACATTTATAAGCTGTTGAAATAG
Protein sequenceShow/hide protein sequence
MTMIPIKVVAAMAAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKVMNSSEAPGWWTHRDGGNKRLRNALLVATAACGITGVTL
LVGSTLFYIYKLLK