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Spg012059 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012059
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationscaffold1:2923236..2925917
RNA-Seq ExpressionSpg012059
SyntenySpg012059
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-4972.73Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE+++D+D+DD+         ++RA SG R GSGGGR++V RCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]1.6e-4875.35Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        MANS DQGWED++   ++DDDDNDN+     DN +RR   L+  R G GGGRSTVARCQADGCNADL+ A+ YHRRHKVCEFH++AAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QCSRFHA+SEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]4.3e-4976.76Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        MANS D  WED++  +++DDDDND ++    +N+RR  SG   GR G GGGRSTVARCQADGCNADL+ AR YHRRHKVCEFHAKAAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QCSRFHAVSEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]1.5e-4974.47Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE+++++D+D      D  ++RA+S  R GSGGGR++VARCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]3.5e-5178.57Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDND-----NDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        M NS DQ WED++ EE++D+DDN+      D+  +R AL+GGR GSGGGR TVARCQADGCNADLS AR YHRRHKVCEFHAKAAVVILAGLEQRFCQQC
Subjt:  MANSGDQGWEDILEEEEEDDDDND-----NDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        SRFHAVSEFD+TKRSCR+RLAGHNERRRK LP+FHGQSST
Subjt:  SRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein8.0e-4975.35Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        MANS DQGWED++   ++DDDDNDN+     DN +RR   L+  R G GGGRSTVARCQADGCNADL+ A+ YHRRHKVCEFH++AAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND-----DNNQRR--ALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QCSRFHA+SEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A1S3AZN8 squamosa promoter-binding protein 12.1e-4976.76Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        MANS D  WED++  +++DDDDND ++    +N+RR  SG   GR G GGGRSTVARCQADGCNADL+ AR YHRRHKVCEFHAKAAVVILAGLEQRFCQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDD----NNQRRALSG---GRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QCSRFHAVSEFD+TKRSCR RLAGHNERRRK LP+FHGQSST
Subjt:  QCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A6J1CK81 squamosa promoter-binding protein 11.6e-4176.22Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDN------DNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MA+ G    ED  EEEEE+D           ++   RRALSGGR G G GRSTVARCQADGCNADLS AR YHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDN------DNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSL-PEFH-GQSST
        CSRFHAVSEFDETKRSCR+RLAGHNERRRKSL  EFH GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSL-PEFH-GQSST

A0A6J1EFR3 Squamosa promoter-binding-like protein1.8e-4872.03Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M +SGDQGW + +EEEEE++++ D+DD+         ++RA SG R GSGGGR++V RCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSGDQGWEDILEEEEEDDDDNDNDDN--------NQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        QQCSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  QQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein7.2e-5074.47Show/hide
Query:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NSGDQGW D +EEEEE+++++D+D      D  ++RA+S  R GSGGGR++VARCQAD CN DL+ ARAYHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSGDQGWEDILEEEEEDDDDNDND------DNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST
        CSRFH+VSEFDETKRSCR+RLAGHNERRRK+LP+F GQSST
Subjt:  CSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 101.5e-2866.32Show/hide
Query:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        R+  GG +  G GG      RCQA+GC ADLS A+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

P93015 Squamosa promoter-binding-like protein 36.8e-2957.02Show/hide
Query:  GDQGWEDILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF
        G +   ++ EEEEE+++  D D   +  AL   + G     S V  CQ + C AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEF
Subjt:  GDQGWEDILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DETKRSCRKRLAGHNERRRKS
        DE KRSCR+RLAGHNERRRKS
Subjt:  DETKRSCRKRLAGHNERRRKS

Q0DAE8 Squamosa promoter-binding-like protein 101.5e-2866.32Show/hide
Query:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        R+  GG +  G GG      RCQA+GC ADLS A+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCRKRLA HN RRRK
Subjt:  RALSGGRY--GSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

Q0E3F8 Squamosa promoter-binding-like protein 55.2e-2972.94Show/hide
Query:  RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSS
        RCQA+GC ADLS+A+ YHRRHKVC+FHAKAA V+ AG +QRFCQQCSRFH ++EFDE KRSCRKRL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRKSLPEFHGQSS

Q38741 Squamosa promoter-binding protein 11.8e-2958.12Show/hide
Query:  EEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK
        +E+ E++DD   D    R     G+  SG   ST   CQ + C A++++A+ YHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFDE KRSCR+
Subjt:  EEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRK

Query:  RLAGHNERRRKSLPEFH
        RLAGHNERRRKS  + H
Subjt:  RLAGHNERRRKSLPEFH

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 81.8e-2964.36Show/hide
Query:  DDNNQRRALSGGRYGSGGGRSTVA--RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRR
        DD+   R     R G  G  ++++  RCQA+GCNADLS A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD  KRSCRKRLA HN RRR
Subjt:  DDNNQRRALSGGRYGSGGGRSTVA--RCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRR

Query:  K
        K
Subjt:  K

AT1G27360.1 squamosa promoter-like 111.0e-2770.73Show/hide
Query:  GGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK
        G    V RCQ DGC  DLSSA+ YHR+HKVCE H+K   V ++GLE+RFCQQCSRFHAVSEFDE KRSCRKRL+ HN RRRK
Subjt:  GGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRKRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 41.2e-2857.26Show/hide
Query:  ILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC
        ++EE+ E D D + +    R   S G    GG   ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFDE KRSC
Subjt:  ILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC

Query:  RKRLAGHNERRRKSLPE
        R+RLAGHNERRRKS  E
Subjt:  RKRLAGHNERRRKSLPE

AT1G53160.2 squamosa promoter binding protein-like 41.2e-2857.26Show/hide
Query:  ILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC
        ++EE+ E D D + +    R   S G    GG   ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFDE KRSC
Subjt:  ILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSC

Query:  RKRLAGHNERRRKSLPE
        R+RLAGHNERRRKS  E
Subjt:  RKRLAGHNERRRKSLPE

AT2G33810.1 squamosa promoter binding protein-like 34.8e-3057.02Show/hide
Query:  GDQGWEDILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF
        G +   ++ EEEEE+++  D D   +  AL   + G     S V  CQ + C AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEF
Subjt:  GDQGWEDILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DETKRSCRKRLAGHNERRRKS
        DE KRSCR+RLAGHNERRRKS
Subjt:  DETKRSCRKRLAGHNERRRKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCCGGAGATCAAGGTTGGGAGGACATACTGGAAGAAGAGGAAGAAGACGACGACGACAACGACAACGACGACAACAACCAAAGGAGGGCTTTAAGCGGTGG
TCGATATGGCAGCGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATTTGAGCAGCGCCAGGGCGTACCACCGCCGCCACAAGGTATGTG
AGTTCCATGCCAAGGCGGCGGTGGTGATTTTGGCCGGATTGGAACAACGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGAAGC
TGCCGGAAGCGCTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTACCGGAATTCCATGGACAATCCTCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCCGGAGATCAAGGTTGGGAGGACATACTGGAAGAAGAGGAAGAAGACGACGACGACAACGACAACGACGACAACAACCAAAGGAGGGCTTTAAGCGGTGG
TCGATATGGCAGCGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATTTGAGCAGCGCCAGGGCGTACCACCGCCGCCACAAGGTATGTG
AGTTCCATGCCAAGGCGGCGGTGGTGATTTTGGCCGGATTGGAACAACGCTTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGATGAGACAAAACGAAGC
TGCCGGAAGCGCTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTACCGGAATTCCATGGACAATCCTCCACTTGA
Protein sequenceShow/hide protein sequence
MANSGDQGWEDILEEEEEDDDDNDNDDNNQRRALSGGRYGSGGGRSTVARCQADGCNADLSSARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRS
CRKRLAGHNERRRKSLPEFHGQSST