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Spg012120 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012120
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionproton-dependent oligopeptide transport (POT) family protein
Genome locationscaffold1:15309527..15312337
RNA-Seq ExpressionSpg012120
SyntenySpg012120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
O80436 Protein NRT1/ PTR FAMILY 5.56.3e-0441.38Show/hide
Query:  GVVSYHGKRPRGSPITTIFKVFISSTSKMFRSSTSGDDVQLYDSSHPDAYKIPRTNAL
        G  SY   +P GSP+TT+F+VF++S SKM   + S +  QLY+ +  D    P T++L
Subjt:  GVVSYHGKRPRGSPITTIFKVFISSTSKMFRSSTSGDDVQLYDSSHPDAYKIPRTNAL
Arabidopsis top hitse value%identityAlignment
AT2G38100.1 proton-dependent oligopeptide transport (POT) family protein4.5e-0541.38Show/hide
Query:  GVVSYHGKRPRGSPITTIFKVFISSTSKMFRSSTSGDDVQLYDSSHPDAYKIPRTNAL
        G  SY   +P GSP+TT+F+VF++S SKM   + S +  QLY+ +  D    P T++L
Subjt:  GVVSYHGKRPRGSPITTIFKVFISSTSKMFRSSTSGDDVQLYDSSHPDAYKIPRTNAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGATGATCTACTTCGGCCTTCTTCTCGTGGCGTTGTTTCTTATCATGGTAAGAGGCCAAGAGGTAGCCCGATTACGACGATTTTCAAAGTCTTCATCTCTTC
CACTTCTAAAATGTTTCGTTCTTCAACTAGTGGTGATGATGTGCAACTCTATGACAGCTCTCATCCTGATGCTTACAAAATCCCTCGCACTAATGCCCTCGGGTCTCTCT
CTCTTATCTTTGTGGACGTGTTCACTGGCGACGAGAGACCGCCGTCGTTGGCTCCTCATGAATCGCCAAGAAGAAGAAAGCAAGAGGAAGAAGCCATACGTGCCAAGAAA
TGCGTTTCACCGTTGCCTTCCCGCCGACAGAAGGAGAAAGAGACATCGAGGGATTCCCGATTAAGCATTGTGATTGCTTTCGCTGAGTCTGATTCCATTATAATCTGTGG
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGATGATCTACTTCGGCCTTCTTCTCGTGGCGTTGTTTCTTATCATGGTAAGAGGCCAAGAGGTAGCCCGATTACGACGATTTTCAAAGTCTTCATCTCTTC
CACTTCTAAAATGTTTCGTTCTTCAACTAGTGGTGATGATGTGCAACTCTATGACAGCTCTCATCCTGATGCTTACAAAATCCCTCGCACTAATGCCCTCGGGTCTCTCT
CTCTTATCTTTGTGGACGTGTTCACTGGCGACGAGAGACCGCCGTCGTTGGCTCCTCATGAATCGCCAAGAAGAAGAAAGCAAGAGGAAGAAGCCATACGTGCCAAGAAA
TGCGTTTCACCGTTGCCTTCCCGCCGACAGAAGGAGAAAGAGACATCGAGGGATTCCCGATTAAGCATTGTGATTGCTTTCGCTGAGTCTGATTCCATTATAATCTGTGG
GTAA
Protein sequenceShow/hide protein sequence
MIGDDLLRPSSRGVVSYHGKRPRGSPITTIFKVFISSTSKMFRSSTSGDDVQLYDSSHPDAYKIPRTNALGSLSLIFVDVFTGDERPPSLAPHESPRRRKQEEEAIRAKK
CVSPLPSRRQKEKETSRDSRLSIVIAFAESDSIIICG