; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012146 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012146
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold1:5120192..5122715
RNA-Seq ExpressionSpg012146
SyntenySpg012146
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1199952.1 Protein preY, mitochondrial [Morella rubra]8.7e-4446.93Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDAL--------KGQRRKVV----------
        MVR S ALLK+AG+GL  TLSEIL+CPLSKQPLRYC  +NSLISDA+GVSFPIK GIPCLVPKDG+IIE  D L         G    VV          
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDAL--------KGQRRKVV----------

Query:  -----------------------DDAME----------------------REWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFW
                               DD  E                       + C VCLS++ +G + ++LPC HEFHK+CV RWF+ C  +KTCP+C+F 
Subjt:  -----------------------DDAME----------------------REWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFW

Query:  TRDEDG-RTTEVLTEEMVIWFTSFHVIG
           ED  R  E LT+EMVIWF+SFHV G
Subjt:  TRDEDG-RTTEVLTEEMVIWFTSFHVIG

KAF5753062.1 putative Protein preY mitochondrial precursor [Tripterygium wilfordii]6.7e-4446.83Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRKVVDDAMEREW----------
        MVR+SK+L++ AG+G++ TLSEIL+CPLSKQPLRYCE +NSLISD+IGVSFPIK GIPCLVP+DG+I++T D L+         A++ E+          
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRKVVDDAMEREW----------

Query:  --------------------------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDED-----GRTTEVLTEEMVIWFTS
                                  C VCL K  EG + +VLPC H FHK+CV RWF  C  ++TCP+C+F   +E+      ++ E  TEEMVIWF+S
Subjt:  --------------------------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDED-----GRTTEVLTEEMVIWFTS

Query:  FHVIG
        FH+ G
Subjt:  FHVIG

KAG6603894.1 hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]8.9e-6567.89Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKG----------------QRRK----
        MVRIS++LLKEAGSGLT TLSEIL+CPLSKQPLRYCEASNSLISD I VSFPI+GG+PCLVPK+GRIIET D LKG                +R K    
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKG----------------QRRK----

Query:  -------VVDDAMEREWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI
               + D AMEREWCSVCLS VME   AQ+LPC+HEFHKICV RWFH+CQ QKTC IC+FW  DED + TEVLTEEMVIW TS HVI
Subjt:  -------VVDDAMEREWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI

XP_022132660.1 E3 ubiquitin-protein ligase RNF181 homolog [Momordica charantia]3.4e-3279.52Show/hide
Query:  DAMEREWCSVCLSKVMEGAEAQV--LPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIG
        DA+ REWCSVCLSKVMEG E++V  LPC HEFHKIC+ RWFH+C  QKTCPICQFW RD+DG+TTEVLTEEMVIWFTSFHV+G
Subjt:  DAMEREWCSVCLSKVMEGAEAQV--LPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIG

XP_022977421.1 uncharacterized protein LOC111477769 isoform X1 [Cucurbita maxima]6.4e-5564.37Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK-----------VVDDAMERE
        MVRIS++LLKEAGSGLT TLSEIL+CPLSKQPLRYCEASNSLISD I VSFP+             + + +D+   +R K           + D A+ERE
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK-----------VVDDAMERE

Query:  WCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI
        WCSVC S VME   AQ+LPC+HEFHKICV RWFH+CQ QKTCPICQFW RDED + TEVLTEEMVIW TS HVI
Subjt:  WCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI

TrEMBL top hitse value%identityAlignment
A0A6A1UIA7 Protein preY, mitochondrial4.2e-4446.93Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDAL--------KGQRRKVV----------
        MVR S ALLK+AG+GL  TLSEIL+CPLSKQPLRYC  +NSLISDA+GVSFPIK GIPCLVPKDG+IIE  D L         G    VV          
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDAL--------KGQRRKVV----------

Query:  -----------------------DDAME----------------------REWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFW
                               DD  E                       + C VCLS++ +G + ++LPC HEFHK+CV RWF+ C  +KTCP+C+F 
Subjt:  -----------------------DDAME----------------------REWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFW

Query:  TRDEDG-RTTEVLTEEMVIWFTSFHVIG
           ED  R  E LT+EMVIWF+SFHV G
Subjt:  TRDEDG-RTTEVLTEEMVIWFTSFHVIG

A0A6J1BT35 E3 ubiquitin-protein ligase RNF181 homolog1.7e-3279.52Show/hide
Query:  DAMEREWCSVCLSKVMEGAEAQV--LPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIG
        DA+ REWCSVCLSKVMEG E++V  LPC HEFHKIC+ RWFH+C  QKTCPICQFW RD+DG+TTEVLTEEMVIWFTSFHV+G
Subjt:  DAMEREWCSVCLSKVMEGAEAQV--LPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIG

A0A6J1BW32 uncharacterized protein LOC111005251 isoform X22.2e-2985Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK
        MVRIS ALLK+AGSGLT TLSEIL+CPL+KQPLRYCEASNSLISD IGVSFPIKGGIPCLVP+DGRIIET DALK + R+
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK

A0A6J1IJV3 uncharacterized protein LOC111477769 isoform X13.1e-5564.37Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK-----------VVDDAMERE
        MVRIS++LLKEAGSGLT TLSEIL+CPLSKQPLRYCEASNSLISD I VSFP+             + + +D+   +R K           + D A+ERE
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRK-----------VVDDAMERE

Query:  WCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI
        WCSVC S VME   AQ+LPC+HEFHKICV RWFH+CQ QKTCPICQFW RDED + TEVLTEEMVIW TS HVI
Subjt:  WCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVI

A0A7J7E325 RING-type domain-containing protein3.2e-4446.83Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRKVVDDAMEREW----------
        MVR+SK+L++ AG+G++ TLSEIL+CPLSKQPLRYCE +NSLISD+IGVSFPIK GIPCLVP+DG+I++T D L+         A++ E+          
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRKVVDDAMEREW----------

Query:  --------------------------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDED-----GRTTEVLTEEMVIWFTS
                                  C VCL K  EG + +VLPC H FHK+CV RWF  C  ++TCP+C+F   +E+      ++ E  TEEMVIWF+S
Subjt:  --------------------------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDED-----GRTTEVLTEEMVIWFTS

Query:  FHVIG
        FH+ G
Subjt:  FHVIG

SwissProt top hitse value%identityAlignment
Q2T9V7 Protein preY, mitochondrial3.0e-0747.92Show/hide
Query:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRI
        L E L+CPLSK+PLRY  ++N LI++ +G+++PI  GIP ++P+  R+
Subjt:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRI

Q5M8Z2 Protein preY, mitochondrial7.2e-0950Show/hide
Query:  TLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRII
        TL + L+CPLS++ LRY E++N LI+D +G+++PI  GIP ++P+D R+I
Subjt:  TLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRII

Q5U1Z8 Protein preY, mitochondrial3.0e-0746.81Show/hide
Query:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGR
        L + L+CPLSK+PLRY  ++N LI+D +G+++PI  G+P ++P+  R
Subjt:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGR

Q68DV7 E3 ubiquitin-protein ligase RNF431.0e-0747.83Show/hide
Query:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF
        C++CL +  EG E +V+ C HEFH+ CV  W HQ    +TCP+C F
Subjt:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF

Q96I23 Protein preY, mitochondrial3.0e-0747.92Show/hide
Query:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRI
        L E L+CPLSK+PLRY  ++N LI++ +G+++PI  GIP ++P+  R+
Subjt:  LSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRI

Arabidopsis top hitse value%identityAlignment
AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein1.8e-0743.48Show/hide
Query:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF
        C +CLS   +GAE   LPC H FH  C+ +W    +   TCP+C+F
Subjt:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF

AT2G01735.1 RING-finger protein for embryogenesis1.1e-0741.3Show/hide
Query:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF
        C +CLS   +GAE   LPC H FH  C+ +W    + + TCP+C++
Subjt:  CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF

AT3G51325.1 RING/U-box superfamily protein2.2e-1342.31Show/hide
Query:  DAMEREWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFH
        +  E E CSVCL ++      + LPC HEFH +CV  WF+  +K   CP+C+F        TT +LT+E+++WF+SFH
Subjt:  DAMEREWCSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFH

AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein4.1e-0732.47Show/hide
Query:  VDALKGQRRKVV-----DDAMEREW------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF
        V+ L G+ R ++     D  +ER        C +CL +  +G E + LPC H FH  C+ +W H       CP+C+F
Subjt:  VDALKGQRRKVV-----DDAMEREW------CSVCLSKVMEGAEAQVLPCEHEFHKICVGRWFHQCQKQKTCPICQF

AT4G35905.1 unknown protein2.8e-2471.01Show/hide
Query:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIE
        MVR+++ LLK+AG+ +  TLSEIL+CPLSKQPLR+CE + SL+SD IGVSFPIK GIPCLVPKDG+I+E
Subjt:  MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAATACTCTCTCCGAGATTCTGATCTGCCCGCTCTCCAAACAACCTTTAAGGTATTGCGA
AGCGTCAAATTCTCTGATCAGCGATGCGATTGGTGTTTCTTTTCCTATAAAGGGCGGAATCCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGTTGATGCAT
TGAAAGGGCAAAGGAGGAAGGTTGTGGATGATGCTATGGAGAGGGAGTGGTGTTCTGTGTGTTTGTCAAAAGTAATGGAGGGAGCGGAAGCACAAGTTCTCCCTTGCGAA
CACGAGTTTCACAAGATATGCGTCGGGAGGTGGTTCCATCAATGCCAGAAACAGAAAACTTGTCCAATTTGTCAGTTCTGGACGAGAGACGAAGATGGTCGAACAACAGA
AGTGCTCACCGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGAATAAGCAAAGCGCTTCTGAAAGAAGCGGGCTCTGGTCTCACCAATACTCTCTCCGAGATTCTGATCTGCCCGCTCTCCAAACAACCTTTAAGGTATTGCGA
AGCGTCAAATTCTCTGATCAGCGATGCGATTGGTGTTTCTTTTCCTATAAAGGGCGGAATCCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGTTGATGCAT
TGAAAGGGCAAAGGAGGAAGGTTGTGGATGATGCTATGGAGAGGGAGTGGTGTTCTGTGTGTTTGTCAAAAGTAATGGAGGGAGCGGAAGCACAAGTTCTCCCTTGCGAA
CACGAGTTTCACAAGATATGCGTCGGGAGGTGGTTCCATCAATGCCAGAAACAGAAAACTTGTCCAATTTGTCAGTTCTGGACGAGAGACGAAGATGGTCGAACAACAGA
AGTGCTCACCGAGGAGATGGTAATATGGTTCACTTCTTTTCATGTTATTGGTTAG
Protein sequenceShow/hide protein sequence
MVRISKALLKEAGSGLTNTLSEILICPLSKQPLRYCEASNSLISDAIGVSFPIKGGIPCLVPKDGRIIETVDALKGQRRKVVDDAMEREWCSVCLSKVMEGAEAQVLPCE
HEFHKICVGRWFHQCQKQKTCPICQFWTRDEDGRTTEVLTEEMVIWFTSFHVIG