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Spg012196 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012196
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:11033475..11033810
RNA-Seq ExpressionSpg012196
SyntenySpg012196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040704.1 hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa]6.0e-0439.74Show/hide
Query:  IVNLGDALLHQIVSFALGEHCKR-TGLVIRFHSFLSAGVHVEPTGKLYSLKIKVEVQLGTIWVIKIVVLHVFIPFFGL
        IVN  D+LL ++    +  HC+   G+  +F   +     V P GK Y+LK+K++V++G  +VIKIVV+  F PF GL
Subjt:  IVNLGDALLHQIVSFALGEHCKR-TGLVIRFHSFLSAGVHVEPTGKLYSLKIKVEVQLGTIWVIKIVVLHVFIPFFGL
TrEMBL top hitse value%identityAlignment
A0A5D3BPM4 Uncharacterized protein2.9e-0439.74Show/hide
Query:  IVNLGDALLHQIVSFALGEHCKR-TGLVIRFHSFLSAGVHVEPTGKLYSLKIKVEVQLGTIWVIKIVVLHVFIPFFGL
        IVN  D+LL ++    +  HC+   G+  +F   +     V P GK Y+LK+K++V++G  +VIKIVV+  F PF GL
Subjt:  IVNLGDALLHQIVSFALGEHCKR-TGLVIRFHSFLSAGVHVEPTGKLYSLKIKVEVQLGTIWVIKIVVLHVFIPFFGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTGTGGGAGGAGTTGGAGCTGCCTTGAGTTTGGGCACTGGAATAATTTTCCAACCGATTGTGAATCTGGGCGACGCATTGCTGCATCAGATAGTAAGTTTTGC
ATTAGGAGAGCATTGCAAGAGGACTGGGCTCGTTATTAGGTTCCACAGTTTTTTGAGTGCTGGCGTTCATGTGGAGCCGACGGGGAAACTCTACAGCCTTAAGATAAAGG
TGGAGGTCCAATTGGGTACCATATGGGTAATAAAGATCGTTGTGCTTCATGTGTTTATTCCATTTTTTGGCTTATGGTCCCTCAGAGCTTACGAAGAAGTCGCAATAGAG
GCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATTGTGGGAGGAGTTGGAGCTGCCTTGAGTTTGGGCACTGGAATAATTTTCCAACCGATTGTGAATCTGGGCGACGCATTGCTGCATCAGATAGTAAGTTTTGC
ATTAGGAGAGCATTGCAAGAGGACTGGGCTCGTTATTAGGTTCCACAGTTTTTTGAGTGCTGGCGTTCATGTGGAGCCGACGGGGAAACTCTACAGCCTTAAGATAAAGG
TGGAGGTCCAATTGGGTACCATATGGGTAATAAAGATCGTTGTGCTTCATGTGTTTATTCCATTTTTTGGCTTATGGTCCCTCAGAGCTTACGAAGAAGTCGCAATAGAG
GCCTAA
Protein sequenceShow/hide protein sequence
MDIVGGVGAALSLGTGIIFQPIVNLGDALLHQIVSFALGEHCKRTGLVIRFHSFLSAGVHVEPTGKLYSLKIKVEVQLGTIWVIKIVVLHVFIPFFGLWSLRAYEEVAIE
A