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Spg012235 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012235
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold1:12351222..12351706
RNA-Seq ExpressionSpg012235
SyntenySpg012235
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607234.1 hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2650.31Show/hide
Query:  QRLKTTRITKGS------LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT-------------------------------------------
        +R+ TT +   +      L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT                                           
Subjt:  QRLKTTRITKGS------LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT-------------------------------------------

Query:  --TKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES
           K RGD S KGSRNR LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES
Subjt:  --TKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES

XP_022948541.1 uncharacterized protein LOC111452187 [Cucurbita moschata]1.2e-2654.55Show/hide
Query:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISGKGSRNRI
        L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT                                              K RGD S KGSRNR 
Subjt:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISGKGSRNRI

Query:  LSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES
        LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES
Subjt:  LSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES

XP_022997949.1 uncharacterized protein LOC111492746 [Cucurbita maxima]9.4e-2749.69Show/hide
Query:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------
        +R+ TT + + + +       IPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT                                          
Subjt:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------

Query:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA
           K RGD S KGSRNR LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES A
Subjt:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA

XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]1.1e-2751.53Show/hide
Query:  QRLKTTRITKG------SLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------
        +R+ TT +         SL LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT                                          
Subjt:  QRLKTTRITKG------SLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------

Query:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA
           K RGD S KGSRNR LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES A
Subjt:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA

XP_038893882.1 uncharacterized protein LOC120082683 [Benincasa hispida]3.6e-1846.3Show/hide
Query:  EEKRESALQRLKTTRITK-GSLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT-----------------------------------KMRG
        ++KR +    ++    TK  SLHLIPSE       TRNP E+  G DLELG  ED LLKTT                                   + + 
Subjt:  EEKRESALQRLKTTRITK-GSLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT-----------------------------------KMRG

Query:  DI------SGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDS--YKLHGFNPLFES
        D+      S KGSRNR LSDII  I T FFTPMAS PLKASPLSSL+S  YKLHGFNPLFES
Subjt:  DI------SGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDS--YKLHGFNPLFES

TrEMBL top hitse value%identityAlignment
A0A660KYG5 Uncharacterized protein6.4e-1338.64Show/hide
Query:  ETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT--------------------------------------TKMRGDISGKGSRNRILSDIITMIQTSFF
        +TN T E  R+P  +C   DLELG S+D L+K                                        K RGD S KGSR R LSD++  + + F 
Subjt:  ETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT--------------------------------------TKMRGDISGKGSRNRILSDIITMIQTSFF

Query:  TPMASSPLKASPLSSLDSYKLHGFNPLFESLA
         P+AS  LK  PL++LDSY  HGFNPLFES A
Subjt:  TPMASSPLKASPLSSLDSYKLHGFNPLFESLA

A0A6J1G9H1 uncharacterized protein LOC1114521875.9e-2754.55Show/hide
Query:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISGKGSRNRI
        L LIPSETN+T EITRNPLE+ HGLDLE G  EDLLLKT                                              K RGD S KGSRNR 
Subjt:  LHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKT---------------------------------------------TKMRGDISGKGSRNRI

Query:  LSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES
        LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES
Subjt:  LSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES

A0A6J1I5Z4 uncharacterized protein LOC1114695061.9e-1247.27Show/hide
Query:  TRNPLEDCHGLDLELGCSED---------------------LLLKTTKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKAS-----PLSSLDSYK
        T NP E  HGL+LEL   ++                     L     +   D+  + SR R LSDIIT I+T +FTPMAS PLKAS     PLS LDSYK
Subjt:  TRNPLEDCHGLDLELGCSED---------------------LLLKTTKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKAS-----PLSSLDSYK

Query:  LHGFNPLFES
        LHGFNPLFES
Subjt:  LHGFNPLFES

A0A6J1KBC0 uncharacterized protein LOC1114927464.5e-2749.69Show/hide
Query:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------
        +R+ TT + + + +       IPSETN+T EITRNPLE+ HGLDLE G  EDLLLKTT                                          
Subjt:  QRLKTTRITKGSLH------LIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTT------------------------------------------

Query:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA
           K RGD S KGSRNR LSDIIT I+T FFTP+AS PLKASPL SLDSYKLH FNPLFES A
Subjt:  ---KMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFESLA

A0A6P6FW46 uncharacterized protein LOC1074110781.7e-1365.15Show/hide
Query:  EDLLLKTTKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES
        EDL  +  K RGD S KGSR R LSD+I  + T F TP+AS PLK+SPL+ LDSYK HGFNPLFES
Subjt:  EDLLLKTTKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59350.1 unknown protein5.7e-0652.94Show/hide
Query:  GKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES
        G  SR R LSD+     T  FTP+AS    +SP   L+SY  HGFNPLFES
Subjt:  GKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYKLHGFNPLFES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGAAAAAAGAGAATCAGCATTACAGAGGTTGAAGACGACGAGAATAACAAAAGGGTCACTTCATTTGATTCCTTCTGAAACCAACACCACTCACGAAATTAC
CAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGAGGTGATATAAGCGGAAAAGGGTCGA
GAAACAGAATCTTGAGTGATATAATCACAATGATTCAAACGTCGTTCTTCACTCCAATGGCTTCTTCGCCATTGAAGGCTTCTCCTCTGAGTTCTTTAGACTCGTACAAG
CTCCATGGATTCAATCCCCTCTTTGAATCGTTGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGAAAAAAGAGAATCAGCATTACAGAGGTTGAAGACGACGAGAATAACAAAAGGGTCACTTCATTTGATTCCTTCTGAAACCAACACCACTCACGAAATTAC
CAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTGCAGTGAAGATTTGTTGTTGAAGACGACGAAGATGAGAGGTGATATAAGCGGAAAAGGGTCGA
GAAACAGAATCTTGAGTGATATAATCACAATGATTCAAACGTCGTTCTTCACTCCAATGGCTTCTTCGCCATTGAAGGCTTCTCCTCTGAGTTCTTTAGACTCGTACAAG
CTCCATGGATTCAATCCCCTCTTTGAATCGTTGGCATAA
Protein sequenceShow/hide protein sequence
MVEEKRESALQRLKTTRITKGSLHLIPSETNTTHEITRNPLEDCHGLDLELGCSEDLLLKTTKMRGDISGKGSRNRILSDIITMIQTSFFTPMASSPLKASPLSSLDSYK
LHGFNPLFESLA