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Spg012242 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012242
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description30S ribosomal protein S31, chloroplastic
Genome locationscaffold1:15370475..15373012
RNA-Seq ExpressionSpg012242
SyntenySpg012242
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]8.0e-4788.52Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPT PSPP
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP

Query:  RKDKFDDDEKIKIEIDESLFSS
        RKDKFDDDEKIKIEIDESLF+S
Subjt:  RKDKFDDDEKIKIEIDESLFSS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]5.0e-4990Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQAASQSPTLSP FFSFSKSETLG SL +STASLA S TSSPSS+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT P+PPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKF+DDEKIKIEID+SLF+
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_022931892.1 30S ribosomal protein S31, chloroplastic-like [Cucurbita moschata]3.7e-4486.67Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQA  QSPTLSP  FSFSKSETLG SL +ST +   S TSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPT PSPPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-4487.5Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQA  QSPTLSP  FSFSKSETLG SL +ST    IS TSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPT PSPPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]3.6e-4790.16Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP
        MASLPFGLLQAASQSPTLSP FFSFSKSETLG SL  SSTASLA S TSSPSSIPAVYCGRGDKKTEKGKRFN SYGNARPR+KTKGRGTPRVPT PSPP
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP

Query:  RKDKFDDDEKIKIEIDESLFSS
        RKDKF+DDEKIKIEIDESLF++
Subjt:  RKDKFDDDEKIKIEIDESLFSS

TrEMBL top hitse value%identityAlignment
A0A1S3BL51 30S ribosomal protein S31, chloroplastic3.9e-4788.52Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPT PSPP
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP

Query:  RKDKFDDDEKIKIEIDESLFSS
        RKDKFDDDEKIKIEIDESLF+S
Subjt:  RKDKFDDDEKIKIEIDESLFSS

A0A5A7TU27 30S ribosomal protein S313.9e-4788.52Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP
        M SLPFGLLQA SQSP+L+P +FSFSKSETLG SL  SSTASLAIS  SSPSSIPAVYCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPT PSPP
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLH-SSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPP

Query:  RKDKFDDDEKIKIEIDESLFSS
        RKDKFDDDEKIKIEIDESLF+S
Subjt:  RKDKFDDDEKIKIEIDESLFSS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic2.4e-4990Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQAASQSPTLSP FFSFSKSETLG SL +STASLA S TSSPSS+PAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT P+PPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKF+DDEKIKIEID+SLF+
Subjt:  KDKFDDDEKIKIEIDESLFS

A0A6J1EV33 30S ribosomal protein S31, chloroplastic-like1.8e-4486.67Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQA  QSPTLSP  FSFSKSETLG SL +ST +   S TSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPT PSPPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic1.8e-4486.67Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR
        MASLPFGLLQA  QSPTLSP  FSFSKSETLG SL +ST +   S TSSPSSIPAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPT PSPPR
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPR

Query:  KDKFDDDEKIKIEIDESLFS
        KDKFDDDEKIKIEIDESLFS
Subjt:  KDKFDDDEKIKIEIDESLFS

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic1.5e-2770.41Show/hide
Query:  SFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPRKDKFDDDEKIKIEIDESLFSS
        S S SET G SL   T   ++S TSS SSIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP  P+PPRKDKF++DEKIKI+IDESLFS+
Subjt:  SFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPRKDKFDDDEKIKIEIDESLFSS

P47909 30S ribosomal protein S31, mitochondrial1.0e-0464.29Show/hide
Query:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPTP
        AV CGRGDKKT++GKRF  SYGNARP R+K   R   RV  P
Subjt:  AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPTP

P47910 30S ribosomal protein S31, chloroplastic2.5e-1453.68Show/hide
Query:  MASLPFGLLQAASQSPTLSPCFFSFSKSETL-GKSLHS-STASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP
        MASL  G    A  S +     FSFS S+++ G SL S  T SL+ S ++SP ++P +YCGRGD+KT KGKRFNHS+GNARP++K KGRG P+ P
Subjt:  MASLPFGLLQAASQSPTLSPCFFSFSKSETL-GKSLHS-STASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVP

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein4.0e-0455.81Show/hide
Query:  SLAISGTSSPSSIPAV----YCGRGDKKTEKGKRFNHSYGNAR
        S   S  S   + PAV     CGRGDKKT+KGKRF  SYGN+R
Subjt:  SLAISGTSSPSSIPAV----YCGRGDKKTEKGKRFNHSYGNAR

AT2G38140.1 plastid-specific ribosomal protein 41.1e-2870.41Show/hide
Query:  SFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPRKDKFDDDEKIKIEIDESLFSS
        S S SET G SL   T   ++S TSS SSIP VYCGRGD+KT KGKRFNHS+GNARPR+K+KGRG  RVP  P+PPRKDKF++DEKIKI+IDESLFS+
Subjt:  SFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPT-PSPPRKDKFDDDEKIKIEIDESLFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACTTCCTTTCGGACTTCTTCAGGCCGCATCTCAATCTCCAACTCTTTCTCCTTGTTTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAAAATCTCTGCATTC
TTCTACTGCTTCTCTTGCAATCTCTGGAACTTCATCGCCTTCTTCAATTCCCGCTGTGTATTGTGGCCGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCACT
CATACGGAAATGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACTCCAAGAGTACCAACTCCTTCTCCGCCTAGGAAGGATAAATTTGATGACGATGAGAAAATTAAG
ATCGAGATTGACGAGTCTCTTTTCTCTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACTTCCTTTCGGACTTCTTCAGGCCGCATCTCAATCTCCAACTCTTTCTCCTTGTTTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAAAATCTCTGCATTC
TTCTACTGCTTCTCTTGCAATCTCTGGAACTTCATCGCCTTCTTCAATTCCCGCTGTGTATTGTGGCCGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCACT
CATACGGAAATGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACTCCAAGAGTACCAACTCCTTCTCCGCCTAGGAAGGATAAATTTGATGACGATGAGAAAATTAAG
ATCGAGATTGACGAGTCTCTTTTCTCTAGTTAG
Protein sequenceShow/hide protein sequence
MASLPFGLLQAASQSPTLSPCFFSFSKSETLGKSLHSSTASLAISGTSSPSSIPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPSPPRKDKFDDDEKIK
IEIDESLFSS