; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionproline-rich protein HaeIII subfamily 1-like
Genome locationscaffold1:18103923..18104345
RNA-Seq ExpressionSpg012247
SyntenySpg012247
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2252.86Show/hide
Query:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV----------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP-
        PSGP+Q T+D PPPPP  S   L  +SK NFGM PK V                            ++SK NF M PKGVPIPPSGPSQRTSD   PPP 
Subjt:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV----------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP-

Query:  -PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP
          SF L  +SK NF M P+  PIPPSGPSQRTSD  PPPP
Subjt:  -PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP

RVW39818.1 hypothetical protein CK203_074658 [Vitis vinifera]1.6e-1446.46Show/hide
Query:  PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKS----------------------VSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFTLEKESKF
        PSGP+Q T+DPPPPP       S F FGM PK                              F M PKG PIPPSGPSQRTSD   PPPP     + S F
Subjt:  PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKS----------------------VSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFTLEKESKF

Query:  NFKMYPRDTPIPPSGPSQRTSDSSPPP
         F M P+  PIPPSGPS R S++ PPP
Subjt:  NFKMYPRDTPIPPSGPSQRTSDSSPPP

XP_008442275.1 PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis melo]1.9e-2356.12Show/hide
Query:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP
        MAS +  M LG   L+LLGFH IA QTHA P+ PSG N +T+DPPPPP                     S F F MYPKG+ +PPSGPSQRTSDS +PPP
Subjt:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP

Query:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP
        P   L  ++KF+F MYP+   +PPSGPSQRTSDSSPPPP
Subjt:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP

XP_011654399.2 proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]3.2e-2351.01Show/hide
Query:  MFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDP-PPPPYTSLENESKFNFGMYPKS----------------VSKSKFNFVMYPKGVPIPPSGPSQ
        M LG S L+LLGFH IA QTHA P+ P+G N +T+DP PPPP  S+     ++ G+ P S                + + KF+F MYPKG+PIPPSGPSQ
Subjt:  MFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDP-PPPPYTSLENESKFNFGMYPKS----------------VSKSKFNFVMYPKGVPIPPSGPSQ

Query:  RTSDSLTPPPPSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP
        RTSDS  PPP +F     + F F MY R  PIPPSG + RTS S PPPP
Subjt:  RTSDSLTPPPPSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]4.1e-1848.23Show/hide
Query:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV---------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--
        PSGP+Q T+D PPPPP+ S   L  +SK NFGM PK V                            +SK    M P+GVPIPP G SQRTSD   PPP  
Subjt:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV---------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--

Query:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPPQL
         S  L K+SK NF M P+  PIPPSGPS RTSD  PPPP +
Subjt:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPPQL

TrEMBL top hitse value%identityAlignment
A0A1S3B4V4 proline-rich protein HaeIII subfamily 1-like9.2e-2456.12Show/hide
Query:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP
        MAS +  M LG   L+LLGFH IA QTHA P+ PSG N +T+DPPPPP                     S F F MYPKG+ +PPSGPSQRTSDS +PPP
Subjt:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP

Query:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP
        P   L  ++KF+F MYP+   +PPSGPSQRTSDSSPPPP
Subjt:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP

A0A438DWZ1 Uncharacterized protein7.8e-1546.46Show/hide
Query:  PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKS----------------------VSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFTLEKESKF
        PSGP+Q T+DPPPPP       S F FGM PK                              F M PKG PIPPSGPSQRTSD   PPPP     + S F
Subjt:  PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKS----------------------VSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFTLEKESKF

Query:  NFKMYPRDTPIPPSGPSQRTSDSSPPP
         F M P+  PIPPSGPS R S++ PPP
Subjt:  NFKMYPRDTPIPPSGPSQRTSDSSPPP

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like1.7e-1443.33Show/hide
Query:  MASITSKMFLGVSALILLGFHFIAFQTHAHPVPSGPNQSTTDPPPPPYTSLENESKFNFGMYPK-----SVSKSK--------FNFVMYPKGVPIPPSGP
        M SI+S M     A++LLG HF  +QT+   +      ++           ENE K N  ++PK     S++KSK        F F ++ K V IPPSGP
Subjt:  MASITSKMFLGVSALILLGFHFIAFQTHAHPVPSGPNQSTTDPPPPPYTSLENESKFNFGMYPK-----SVSKSK--------FNFVMYPKGVPIPPSGP

Query:  SQRTSDSLTPPPPSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPP
        SQR+SDS  PP PS  L KES+ NF + P+ + IPPSGPSQR SDS  PP
Subjt:  SQRTSDSLTPPPPSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPP

A0A5D3C2C7 Proline-rich protein HaeIII subfamily 1-like9.2e-2456.12Show/hide
Query:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP
        MAS +  M LG   L+LLGFH IA QTHA P+ PSG N +T+DPPPPP                     S F F MYPKG+ +PPSGPSQRTSDS +PPP
Subjt:  MASITSKMFLGVSALILLGFHFIAFQTHAHPV-PSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP

Query:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP
        P   L  ++KF+F MYP+   +PPSGPSQRTSDSSPPPP
Subjt:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPP

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like2.0e-1848.23Show/hide
Query:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV---------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--
        PSGP+Q T+D PPPPP+ S   L  +SK NFGM PK V                            +SK    M P+GVPIPP G SQRTSD   PPP  
Subjt:  PSGPNQSTTD-PPPPPYTS---LENESKFNFGMYPKSV---------------------------SKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPP--

Query:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPPQL
         S  L K+SK NF M P+  PIPPSGPS RTSD  PPPP +
Subjt:  PSFTLEKESKFNFKMYPRDTPIPPSGPSQRTSDSSPPPPQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATCACTTCGAAAATGTTTTTAGGAGTTTCAGCTTTGATTCTCTTAGGGTTTCATTTTATCGCTTTCCAAACACATGCTCATCCTGTTCCATCTGGACCAAA
TCAAAGTACAACAGACCCACCGCCACCGCCATACACTAGTTTAGAGAATGAGTCAAAGTTCAACTTCGGGATGTATCCAAAAAGCGTATCTAAATCGAAGTTCAACTTCG
TAATGTATCCGAAAGGTGTTCCTATTCCTCCATCTGGACCAAGTCAAAGGACATCAGACTCGCTGACTCCGCCCCCTCCATCCTTTACTTTGGAGAAGGAATCGAAGTTC
AATTTCAAAATGTATCCGAGAGACACACCGATTCCTCCATCCGGACCGAGTCAAAGGACATCAGACTCATCTCCTCCACCACCGCAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATCACTTCGAAAATGTTTTTAGGAGTTTCAGCTTTGATTCTCTTAGGGTTTCATTTTATCGCTTTCCAAACACATGCTCATCCTGTTCCATCTGGACCAAA
TCAAAGTACAACAGACCCACCGCCACCGCCATACACTAGTTTAGAGAATGAGTCAAAGTTCAACTTCGGGATGTATCCAAAAAGCGTATCTAAATCGAAGTTCAACTTCG
TAATGTATCCGAAAGGTGTTCCTATTCCTCCATCTGGACCAAGTCAAAGGACATCAGACTCGCTGACTCCGCCCCCTCCATCCTTTACTTTGGAGAAGGAATCGAAGTTC
AATTTCAAAATGTATCCGAGAGACACACCGATTCCTCCATCCGGACCGAGTCAAAGGACATCAGACTCATCTCCTCCACCACCGCAGCTGTGA
Protein sequenceShow/hide protein sequence
MASITSKMFLGVSALILLGFHFIAFQTHAHPVPSGPNQSTTDPPPPPYTSLENESKFNFGMYPKSVSKSKFNFVMYPKGVPIPPSGPSQRTSDSLTPPPPSFTLEKESKF
NFKMYPRDTPIPPSGPSQRTSDSSPPPPQL