; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012325 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012325
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:20673332..20678552
RNA-Seq ExpressionSpg012325
SyntenySpg012325
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVX15530.1 putative ribonuclease H protein [Vitis vinifera]3.5e-4039.9Show/hide
Query:  CVGFDRDKRSPGGAN---PYESHRLGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQR
        C G + + +S   A+    + +  LG + KR++V+  +S ++PDIV+L ETKR  ++R FV S+W  ++VEW  + + GASGG++I+W+ +   C +   
Subjt:  CVGFDRDKRSPGGAN---PYESHRLGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQR

Query:  GVFSMSININWKGKDLGWVTGTYGPPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWAN
        G FS+++  N   +   W+T  YGP  P  R +FW EL DL GL    WC+ GDFNV R  +EK    R++ +M+ F+E+I E  L DPPL N  FTW+N
Subjt:  GVFSMSININWKGKDLGWVTGTYGPPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWAN

Query:  NRA
         +A
Subjt:  NRA

RVX15530.1 putative ribonuclease H protein [Vitis vinifera]5.1e-1534.81Show/hide
Query:  WSPNPSIGFSCRSFFHCLLDPSPTDPSIF---SMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPC-LIGPFCCITCQMAEEDLDHLLWNCNFARAVW
        WS + S  FS +SFF  L   S  +P +F     LW  KVP KV+   W V HG+VNT D+L  + P   + P  CI C+   E +DHL   C     +W
Subjt:  WSPNPSIGFSCRSFFHCLLDPSPTDPSIF---SMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPC-LIGPFCCITCQMAEEDLDHLLWNCNFARAVW

Query:  DMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTF
        +  F    L +   R   +M+           +G  LWQ     ++W +W ERNNR F
Subjt:  DMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTF

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]2.5e-4643.64Show/hide
Query:  GDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPS
        G+RPLC  +P LYHLSS+KN  +A+ L  +G+S S+SFGF R+LSDR+T ++++L+SL+E  +F   RRD  +WSP P  GF C+SFF CL++ +PT  S
Subjt:  GDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPS

Query:  IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR
        + S++W++KVP+K   F WQV                              EEDLDHLLW+C     VWD F  +F L +ARHR +R  +EEFL + P  
Subjt:  IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR

Query:  DQGNFLWQAGIYAIIWGLWG
        ++G FLW A ++A + G  G
Subjt:  DQGNFLWQAGIYAIIWGLWG

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]5.4e-4148.31Show/hide
Query:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG
        LG R KR +VKE + +  PDIVILLETK+   +R+ V  +WG+R  EW    S+G SGG+ ++WN  SV+ +D   G FS+SI I        W++G YG
Subjt:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG

Query:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR
        P R + R  FW EL DL G CG+ WC+ GDFNV R   EK++ GR++KSM+ FN++I+E +L DP L N  FTW+N R
Subjt:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]3.7e-4242.25Show/hide
Query:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG
        L  R KR VVK+++  + PD+V+  ETK  + +R F+RS+WG R   W  + S G SGG+LIMW+   V+  +V  GVFS+SI    +     W+TG YG
Subjt:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG

Query:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNRAQISHELPSLTSFIRCSVGNGE
        P RP  R ++W+ELG L GLC  +WC+  DFNV R  +EK +G   ++SM+ F+ +I EC L DPPLSN RFTW+N   Q +     L  F+        
Subjt:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNRAQISHELPSLTSFIRCSVGNGE

Query:  DTYFWEDMYVGDR
         T  WE++++  R
Subjt:  DTYFWEDMYVGDR

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]1.8e-4148.81Show/hide
Query:  VVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYGPPRPKGRH
        VVKEV+  + PDIV+  ETK  + +R F+RS+WG R   W  + S G SGG+LIMW+   V+  +V  GVFS+SIN   +   + W+TG YGP +P  R 
Subjt:  VVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYGPPRPKGRH

Query:  EFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWAN
        E+W+EL  L GLC  +WC+ GDFNV R  +EK +G   S+SM+ F+ +I +C L D PLSN RFTW+N
Subjt:  EFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWAN

TrEMBL top hitse value%identityAlignment
A0A2N9FKE1 zf-RVT domain-containing protein1.6e-5125.46Show/hide
Query:  QRWKSWLLATGVGCVGFDRDKRSPGGANPYESHRLGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNG
        + W   L + G G     R+ ++      YE+     R +     +       DI+ L E K    +R  VRS+WG   V+W    S GASGGV++MW+ 
Subjt:  QRWKSWLLATGVGCVGFDRDKRSPGGANPYESHRLGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNG

Query:  NSVNCLDVQRGVFSMSININWKGKDLGWV-TGTYGPPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDP
          V  +D   G FS+S   +       WV +G Y P   + R   W EL  L    G+ WCI GDFNV R P+E+  G   S +M+ F+++I    L DP
Subjt:  NSVNCLDVQRGVFSMSININWKGKDLGWV-TGTYGPPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDP

Query:  PLSNGRFTWANNRAQ----------------------ISHELPSLTS-----------FIRC--------------------------------------
         L  GRFTW+N + +                      +  ++P L S           F +C                                      
Subjt:  PLSNGRFTWANNRAQ----------------------ISHELPSLTS-----------FIRC--------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------SVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSP
                +VG+G    FW D++ GD PL   YP L+ +S  K+ SVA ++     SL +   FVR++ D +   + S L LI   +      D   W  
Subjt:  --------SVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSP

Query:  NPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASF
        NP  GF+ +S++ CL  P    P  +  +WK KVP +V FF+W V  G+V T D L RK   +I  +CC+ C++  E +DHL  +C  A+ +WD   + F
Subjt:  NPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASF

Query:  SLQFARHRGLREMIE-EFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIE
         + +   + +RE+IE  F+  P  R + + +W A  + ++W LW ERN RTF G E
Subjt:  SLQFARHRGLREMIE-EFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIE

A0A2N9INQ0 zf-RVT domain-containing protein1.1e-5230.5Show/hide
Query:  ETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWV-TGTYGPPRPKGRHEFWNELGDLSGLCGNH
        ETK     +  VRS+W  + V+WT ++S+GASGG+++MW+   V  +D   G FS+S         L WV +G YGP R   R   W+EL  ++ +    
Subjt:  ETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWV-TGTYGPPRPKGRHEFWNELGDLSGLCGNH

Query:  WCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEE-----CSLFDPPLSNGRFTWANNRAQISHELPSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATY
        WC+ GDFN+ R              +KL    +++      S+  P   +G   W + RA         +  I   VG+G    FW D + GD PL   +
Subjt:  WCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEE-----CSLFDPPLSNGRFTWANNRAQISHELPSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATY

Query:  PRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVK
        P LYHL+      V+++ +  GS++S+   F RS+ D +   + S +SL+   T      D   W+P+    F  RSF+  L+ P P     +  +WK K
Subjt:  PRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVK

Query:  VPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQA
        VP +V FF+W    G++ T + L RK    I  +CC+ C+ + E ++HLL +C  A  +W M    F   +   R + +++  +      + +   +W+ 
Subjt:  VPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQA

Query:  GIYAIIWGLWGERNNRTFRGIER
          + ++W LW ERN+RTF   ER
Subjt:  GIYAIIWGLWGERNNRTFRGIER

A0A5D3CI74 Calpain-type cysteine protease DEK11.2e-4643.64Show/hide
Query:  GDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPS
        G+RPLC  +P LYHLSS+KN  +A+ L  +G+S S+SFGF R+LSDR+T ++++L+SL+E  +F   RRD  +WSP P  GF C+SFF CL++ +PT  S
Subjt:  GDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPS

Query:  IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR
        + S++W++KVP+K   F WQV                              EEDLDHLLW+C     VWD F  +F L +ARHR +R  +EEFL + P  
Subjt:  IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR

Query:  DQGNFLWQAGIYAIIWGLWG
        ++G FLW A ++A + G  G
Subjt:  DQGNFLWQAGIYAIIWGLWG

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)5.3e-4248.31Show/hide
Query:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG
        LG R KR +VKE + +  PDIVILLETK+   +R+ V  +WG+R  EW    S+G SGG+ ++WN  SV+ +D   G FS+SI I        W++G YG
Subjt:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG

Query:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR
        P R + R+ FW EL DL G CG+ WC+ GDFNV R   EK++ GR++KSM+ FN++I+E +L DP L N  FTW+N R
Subjt:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)9.6e-3633.07Show/hide
Query:  SFIRC---SVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSP
        SF++C   SVGNGE   FWED+++ +  L   +PRL  LS  KN+S+A   N     L++ F F R+LS+ +  +++ LL ++        R D R W  
Subjt:  SFIRC---SVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSP

Query:  NPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCL-IGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFAS
             FSC+SF   LL  +      FS +WK K P K+QFF+W   +GR+NT D + R+ P + + P  C+ C+   E++DHL  +C+++  +W     +
Subjt:  NPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCL-IGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFAS

Query:  FSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRG
          +++   +G  E++   L       +   L    ++AI W +W ERN R F+G
Subjt:  FSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRG

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)2.6e-4148.31Show/hide
Query:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG
        LG R KR +VKE + +  PDIVILLETK+   +R+ V  +WG+R  EW    S+G SGG+ ++WN  SV+ +D   G FS+SI I        W++G YG
Subjt:  LGGRDKRKVVKEVISQESPDIVILLETKRYKYNREFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYG

Query:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR
        P R + R  FW EL DL G CG+ WC+ GDFNV R   EK++ GR++KSM+ FN++I+E +L DP L N  FTW+N R
Subjt:  PPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASGGRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNR

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.6e-0624.87Show/hide
Query:  GNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSG---SSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFS
        G+G+   FW D +V  +P       L  L + +  +  + +           + F  +   +  +T   L L +++ +    T  RD   W  +    FS
Subjt:  GNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSG---SSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFS

Query:  CRSFFHCLL---DPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVW
         RS +  L     P P   S F+ LWKV+VP++V+ F+W V +  V T +   R+   L     C  C+   E + H+L +C     +W
Subjt:  CRSFFHCLL---DPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVW

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0528.79Show/hide
Query:  FSMLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR
        +  +W K  VPK   F  W V   R++T DRL  +   L  P  C+ C   +E   HL + C F  AVW  FF   +  F   + +  +I  +L +P   
Subjt:  FSMLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFR

Query:  DQGNFLWQAGIYAIIWGLWGERNNRTFRGIER
             + +    A ++ +W ERN     G+ R
Subjt:  DQGNFLWQAGIYAIIWGLWGERNNRTFRGIER

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0627.74Show/hide
Query:  FSMLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSL--QFARHRGLREMIEEFLPHPP
        F  +W K K+PK   F  W  +  R++T DR+       I P  C+ C   +E   HL ++C FAR VW  F +   +        G+R     +L +P 
Subjt:  FSMLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSL--QFARHRGLREMIEEFLPHPP

Query:  FRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIERDSA
               + +   +A ++ +W ERN R      R +A
Subjt:  FRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIERDSA

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-1226.44Show/hide
Query:  FIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNP-SGSSLSYSFGFVRSLSDRDTLDILSLLSLIEET--TFCTLRRDFRLWSPN
        FI C VG+G    FW D ++G  PL         +  +  R+V   ++     +L  +  ++ S   R+ + I+ L +L+ E          D  LW  +
Subjt:  FIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNP-SGSSLSYSFGFVRSLSDRDTLDILSLLSLIEET--TFCTLRRDFRLWSPN

Query:  ---PSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFA
           PS  FS    +  L   S T P   ++ +K  VPK   F  W V   R++T DRL      L  P  C+ C   ++   HL + C F+  VW  F A
Subjt:  ---PSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFA

Query:  SFSLQFARHRGLREMIEEFLPHPPFRDQG-NFLWQAGIYAIIWGLWGERNNRTFRGIERDS
        S +L       L + +   L   P R++    + +   ++ ++ +W ERN R   G+ R +
Subjt:  SFSLQFARHRGLREMIEEFLPHPPFRDQG-NFLWQAGIYAIIWGLWGERNNRTFRGIERDS

AT4G29090.1 Ribonuclease H-like superfamily protein5.1e-1324.67Show/hide
Query:  SNGRFTWANNRAQISHELPSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLL-
        S   F W +  A  S E+  L    R  VGNGED   W   ++  +P  A   R+  +   +  SV+ +L  S          +         D++ +L 
Subjt:  SNGRFTWANNRAQISHELPSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLL-

Query:  SLIEETTFCTLR------RDFRLWSPNPSIGFSCRSFFHCLLD-----PSP---TDPS---IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCL
          +E      LR       D   W    S  ++ +S +  L        SP   ++PS   I+  +WK +   K+Q F+W+ +   +     L+ +   L
Subjt:  SLIEETTFCTLR------RDFRLWSPNPSIGFSCRSFFHCLLD-----PSP---TDPS---IFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCL

Query:  IGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAG---IYAIIWGLWGERNNRTFRGIERDSAE
             CI C   +E ++HLL+ C FAR  W    A  S+         + I   L        GN  W+     +  ++W LW  RN   FRG E ++ E
Subjt:  IGPFCCITCQMAEEDLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAG---IYAIIWGLWGERNNRTFRGIERDSAE

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.6e-1125.66Show/hide
Query:  PSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLW-
        PS+  F+RC +GNGE   FW D +  D     T+        ++ R  A V+  S +   +     RS + +  L  L++  +  E+      +D  LW 
Subjt:  PSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRSLSDRDTLDILSLLSLIEETTFCTLRRDFRLW-

Query:  ----SPNPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWD
            S  PS  FS R  +  +   SPT P    + +K  +P +     W     R+ T DRL R     I P   + C   +E   HL + C+F+ A+W+
Subjt:  ----SPNPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEEDLDHLLWNCNFARAVWD

Query:  MFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIERDSA
         F + F  + +   GL      ++   P R     + +  + + ++ +W ERN R F  I   ++
Subjt:  MFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIERDSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTGAGTGCGATGTTTCCGGAGGAGAAATCGCCGATTCAACACAACCTCTCTTTACAGAAGGAAGACAAGCATATTATGGCCTCCGAAGTTTCGACGAGGGATTC
TTTTGCTTTGACGGCAGGGGTGTCTCAAGATGTCTCGACTTCAGGGGATCCGACTCAGCCGCTGATCAAGGTAAATTCAGACAGGATTCCTATCCAGGGAAGGGGAGAGT
TTTTGGGCTTCAACCATAACTTTGGGCATCCTGTTTTCTTGAATTCTTTCCAAAATTTTGGTAGTGCCTCGTCCTATCCTTCTGCTTATTCCGTAGGAGAGAGAATGTCG
TCATTTGCTTCCGTATCTGGTATCCCGGGTAGTGGACTCGGGGGAGGCACTCAACCTTTTCCAAGTGGGCTTGTGAGCAACATTCCCTTACCTATCTATAGCCCCACGGA
CCTTGAAGGCCCCCCCATTCAAAGATGGAAATCATGGCTTTTGGCAACCGGGGTGGGCTGCGTTGGCTTCGATCGGGATAAGAGAAGTCCCGGTGGAGCAAACCCCTATG
AATCACATAGGTTAGGGGGGAGGGATAAGCGTAAGGTGGTTAAGGAGGTTATTTCTCAGGAATCTCCAGACATTGTGATTTTGTTGGAAACCAAGCGTTACAAATATAAT
CGTGAGTTCGTTCGCAGCATCTGGGGAAATAGAAAAGTGGAGTGGACTGGTATTGAGTCGATGGGAGCTTCAGGAGGGGTGCTCATTATGTGGAACGGTAACTCTGTGAA
TTGTTTGGATGTGCAGAGAGGTGTGTTCTCCATGTCTATTAACATAAACTGGAAGGGCAAAGACTTAGGGTGGGTCACCGGCACCTACGGTCCTCCGAGGCCCAAAGGTA
GACATGAGTTTTGGAATGAGCTTGGCGATCTTTCTGGGTTATGTGGGAACCATTGGTGCATTCTGGGGGATTTTAATGTGACCCGTTCCCCTACGGAGAAGGCTTCGGGC
GGGAGGATGTCTAAATCGATGAAACTTTTTAACGAGTGGATTGAGGAGTGCAGTCTGTTTGATCCTCCCTTGTCTAATGGGAGATTTACTTGGGCTAACAATAGAGCGCA
AATTTCTCATGAGCTTCCTTCTCTGACTTCTTTTATACGGTGTTCTGTGGGGAATGGGGAGGATACATATTTCTGGGAAGACATGTATGTGGGGGATAGACCCCTTTGTG
CTACTTATCCTCGGCTTTATCATTTATCTTCTATGAAAAATCGCTCTGTGGCCGAGGTTTTGAACCCTTCAGGGAGCTCTCTATCCTATTCGTTTGGCTTCGTGCGATCG
TTGTCTGATAGAGATACTTTAGATATCCTGTCTCTTCTATCTTTGATTGAGGAGACCACATTTTGTACGTTGAGGAGGGATTTTCGTTTGTGGAGTCCTAACCCCTCCAT
TGGCTTCTCTTGTCGGTCCTTCTTTCATTGTTTACTAGACCCTTCTCCCACCGACCCGTCCATTTTTTCCATGCTATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTTTT
TCATTTGGCAGGTTATCCATGGAAGAGTTAATACTCTTGATCGGCTCTCCAGAAAGATCCCTTGCTTGATCGGGCCTTTTTGTTGCATTACCTGTCAGATGGCGGAGGAA
GACCTTGACCATTTGCTGTGGAATTGCAATTTTGCTAGGGCTGTGTGGGACATGTTTTTTGCTTCGTTTAGTTTGCAGTTTGCCAGACATAGGGGCCTTAGAGAGATGAT
CGAGGAGTTCCTTCCCCATCCCCCTTTTCGAGACCAAGGGAATTTCTTGTGGCAAGCGGGGATTTACGCTATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGGACGT
TTAGAGGGATTGAGAGGGATTCGGCAGAGGCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTGAGTGCGATGTTTCCGGAGGAGAAATCGCCGATTCAACACAACCTCTCTTTACAGAAGGAAGACAAGCATATTATGGCCTCCGAAGTTTCGACGAGGGATTC
TTTTGCTTTGACGGCAGGGGTGTCTCAAGATGTCTCGACTTCAGGGGATCCGACTCAGCCGCTGATCAAGGTAAATTCAGACAGGATTCCTATCCAGGGAAGGGGAGAGT
TTTTGGGCTTCAACCATAACTTTGGGCATCCTGTTTTCTTGAATTCTTTCCAAAATTTTGGTAGTGCCTCGTCCTATCCTTCTGCTTATTCCGTAGGAGAGAGAATGTCG
TCATTTGCTTCCGTATCTGGTATCCCGGGTAGTGGACTCGGGGGAGGCACTCAACCTTTTCCAAGTGGGCTTGTGAGCAACATTCCCTTACCTATCTATAGCCCCACGGA
CCTTGAAGGCCCCCCCATTCAAAGATGGAAATCATGGCTTTTGGCAACCGGGGTGGGCTGCGTTGGCTTCGATCGGGATAAGAGAAGTCCCGGTGGAGCAAACCCCTATG
AATCACATAGGTTAGGGGGGAGGGATAAGCGTAAGGTGGTTAAGGAGGTTATTTCTCAGGAATCTCCAGACATTGTGATTTTGTTGGAAACCAAGCGTTACAAATATAAT
CGTGAGTTCGTTCGCAGCATCTGGGGAAATAGAAAAGTGGAGTGGACTGGTATTGAGTCGATGGGAGCTTCAGGAGGGGTGCTCATTATGTGGAACGGTAACTCTGTGAA
TTGTTTGGATGTGCAGAGAGGTGTGTTCTCCATGTCTATTAACATAAACTGGAAGGGCAAAGACTTAGGGTGGGTCACCGGCACCTACGGTCCTCCGAGGCCCAAAGGTA
GACATGAGTTTTGGAATGAGCTTGGCGATCTTTCTGGGTTATGTGGGAACCATTGGTGCATTCTGGGGGATTTTAATGTGACCCGTTCCCCTACGGAGAAGGCTTCGGGC
GGGAGGATGTCTAAATCGATGAAACTTTTTAACGAGTGGATTGAGGAGTGCAGTCTGTTTGATCCTCCCTTGTCTAATGGGAGATTTACTTGGGCTAACAATAGAGCGCA
AATTTCTCATGAGCTTCCTTCTCTGACTTCTTTTATACGGTGTTCTGTGGGGAATGGGGAGGATACATATTTCTGGGAAGACATGTATGTGGGGGATAGACCCCTTTGTG
CTACTTATCCTCGGCTTTATCATTTATCTTCTATGAAAAATCGCTCTGTGGCCGAGGTTTTGAACCCTTCAGGGAGCTCTCTATCCTATTCGTTTGGCTTCGTGCGATCG
TTGTCTGATAGAGATACTTTAGATATCCTGTCTCTTCTATCTTTGATTGAGGAGACCACATTTTGTACGTTGAGGAGGGATTTTCGTTTGTGGAGTCCTAACCCCTCCAT
TGGCTTCTCTTGTCGGTCCTTCTTTCATTGTTTACTAGACCCTTCTCCCACCGACCCGTCCATTTTTTCCATGCTATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTTTT
TCATTTGGCAGGTTATCCATGGAAGAGTTAATACTCTTGATCGGCTCTCCAGAAAGATCCCTTGCTTGATCGGGCCTTTTTGTTGCATTACCTGTCAGATGGCGGAGGAA
GACCTTGACCATTTGCTGTGGAATTGCAATTTTGCTAGGGCTGTGTGGGACATGTTTTTTGCTTCGTTTAGTTTGCAGTTTGCCAGACATAGGGGCCTTAGAGAGATGAT
CGAGGAGTTCCTTCCCCATCCCCCTTTTCGAGACCAAGGGAATTTCTTGTGGCAAGCGGGGATTTACGCTATTATTTGGGGGCTTTGGGGTGAGAGAAACAATAGGACGT
TTAGAGGGATTGAGAGGGATTCGGCAGAGGCTTTCTGA
Protein sequenceShow/hide protein sequence
MNLSAMFPEEKSPIQHNLSLQKEDKHIMASEVSTRDSFALTAGVSQDVSTSGDPTQPLIKVNSDRIPIQGRGEFLGFNHNFGHPVFLNSFQNFGSASSYPSAYSVGERMS
SFASVSGIPGSGLGGGTQPFPSGLVSNIPLPIYSPTDLEGPPIQRWKSWLLATGVGCVGFDRDKRSPGGANPYESHRLGGRDKRKVVKEVISQESPDIVILLETKRYKYN
REFVRSIWGNRKVEWTGIESMGASGGVLIMWNGNSVNCLDVQRGVFSMSININWKGKDLGWVTGTYGPPRPKGRHEFWNELGDLSGLCGNHWCILGDFNVTRSPTEKASG
GRMSKSMKLFNEWIEECSLFDPPLSNGRFTWANNRAQISHELPSLTSFIRCSVGNGEDTYFWEDMYVGDRPLCATYPRLYHLSSMKNRSVAEVLNPSGSSLSYSFGFVRS
LSDRDTLDILSLLSLIEETTFCTLRRDFRLWSPNPSIGFSCRSFFHCLLDPSPTDPSIFSMLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPCLIGPFCCITCQMAEE
DLDHLLWNCNFARAVWDMFFASFSLQFARHRGLREMIEEFLPHPPFRDQGNFLWQAGIYAIIWGLWGERNNRTFRGIERDSAEAF