CuGenDBv2

Gene ID	Spg012366
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
Genome location	scaffold1:13013694..13016847
RNA-Seq Expression	Spg012366
Synteny	Spg012366
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604403.1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-110

89.22

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Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSFS AS PVYR SI ASSRFSP   SF S K TDF+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

KAG7034554.1 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-110

88.79

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Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSFS AS PVYR SI ASSRFSP   SF S K TDF+N LL  PPKSLSFALS  +ALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_022925930.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita moschata]

2.5e-109

88.36

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Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSF  AS PVYR SI A SRFSP   SF S K TDF+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_022979097.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita maxima]

5.1e-110

88.79

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Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSF  AS PVYR SI ASSRFSP   SF S K TDF+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEKDTGYKLRVLAQN+PVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

XP_023543502.1 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo]

2.1e-108

87.93

Show/hide

Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSF  AS PVYR SI ASSRFSP   SF S   T F+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE R+KQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KH91 Uncharacterized protein

8.2e-106

86.64

Show/hide

Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPRS--FASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHHHLPSPSLSFS+ S P+ R    +SSRFSP S    SQK TDFS+ LL  P KSLSF LSGALALGI LSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPRS--FASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE R+KQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGED+SIESAVMAIS+CLREPVG NNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A1S3CH24 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

2.2e-106

85.78

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Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPRS--FASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHHHLPSPSLSFS++SLP+ R    +SSRFSP S  F S+K TDF + LL  P K LSF LSGALALGI LSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPRS--FASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQE R+KQEIADIEKDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGED+SIESAVMAIS+CLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1CRY9 thylakoid lumenal 15.0 kDa protein 2, chloroplastic

2.4e-105

85.59

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Query:  MAFIHLHHHLPSPSLSF--SKASLPVYRP--SISASSRFSPRSF--ASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPT
        MA IHLHHHLPS S+S   +KAS P+  P  S+SASSRFSP SF   +   T F+N LL FPPKS SFALSGALALGIALSGVGFADAKVGVNKPELLP 
Subjt:  MAFIHLHHHLPSPSLSF--SKASLPVYRP--SISASSRFSPRSF--ASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPT

Query:  EFTSVIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNI
        EFTSVIDVAGFLSDGQE R+KQEIA+IEKDTGYKLRVLAQNYPVTPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGNI
Subjt:  EFTSVIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNI

Query:  FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK
        FYWKEKGED SIESAVMAISNCLREPVGPNNCSEIK
Subjt:  FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1EJL7 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

1.2e-109

88.36

Show/hide

Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSF  AS PVYR SI A SRFSP   SF S K TDF+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

A0A6J1IMV5 thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like

2.5e-110

88.79

Show/hide

Query:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS
        MAF+HLHH LPSPSLSF  AS PVYR SI ASSRFSP   SF S K TDF+N LL  PPKSLSFALS  LALG+ALSGVGFADAKVGVNKPELLP EFTS
Subjt:  MAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPR--SFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTS

Query:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
        VIDVAGFLSDGQEFR+KQEIADIEKDTGYKLRVLAQN+PVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK
Subjt:  VIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWK

Query:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK
        EKGE+ASIE+AVMAISNCLREPVGPNNCSEIK
Subjt:  EKGEDASIESAVMAISNCLREPVGPNNCSEIK

SwissProt top hits

e value

%identity

Alignment

Q9LVV5 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic

1.4e-86

75.45

Show/hide

Query:  PSPSLSFSKASLPVYRPSISASSRFSPRSFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTSVIDVAGFLSDGQ
        PS   SFS          +S+SSR S ++     S D  N + +F  KSLS   SGALALG++LSGVGFADAKVGVNKPELLP EFTSVIDVA FLS+GQ
Subjt:  PSPSLSFSKASLPVYRPSISASSRFSPRSFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTSVIDVAGFLSDGQ

Query:  EFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAV
        E RI QEIA++EKDTG+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIE+AV
Subjt:  EFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAV

Query:  MAISNCLREPVGPNNCSEIK
        MAIS+CLREPVG NNC+EI+
Subjt:  MAISNCLREPVGPNNCSEIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G52970.1 thylakoid lumen 15.0 kDa protein

1.0e-87

75.45

Show/hide

Query:  PSPSLSFSKASLPVYRPSISASSRFSPRSFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTSVIDVAGFLSDGQ
        PS   SFS          +S+SSR S ++     S D  N + +F  KSLS   SGALALG++LSGVGFADAKVGVNKPELLP EFTSVIDVA FLS+GQ
Subjt:  PSPSLSFSKASLPVYRPSISASSRFSPRSFASQKSTDFSNLLLQFPPKSLSFALSGALALGIALSGVGFADAKVGVNKPELLPTEFTSVIDVAGFLSDGQ

Query:  EFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAV
        E RI QEIA++EKDTG+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIE+AV
Subjt:  EFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAV

Query:  MAISNCLREPVGPNNCSEIK
        MAIS+CLREPVG NNC+EI+
Subjt:  MAISNCLREPVGPNNCSEIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCCCTATCCAGAACCCTCTCTTTCCTCCAGCTACTCTTTTCTAGAACGCCAAGTCCATCCAAAATCTATGGCACAAACACAGCAACAAGGATCCAGAAATTTTCAGT
AATGGCGTTTATTCATCTTCATCATCACCTTCCATCTCCGTCTCTCTCATTTTCAAAAGCTTCACTGCCGGTTTACAGACCGTCAATCTCCGCATCATCTCGCTTCTCTC
CGCGATCTTTTGCGTCTCAAAAATCAACTGATTTCAGCAACTTGCTTCTTCAGTTTCCCCCAAAATCTCTGAGTTTCGCGCTATCTGGGGCTCTTGCGCTCGGAATTGCT
CTCTCCGGAGTTGGATTTGCGGACGCCAAAGTTGGGGTTAACAAACCAGAATTGCTTCCTACGGAGTTCACCTCTGTCATTGATGTCGCCGGCTTTCTATCTGATGGCCA
GGAATTTAGGATCAAGCAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCTCAAAATTATCCTGTGACACCAGGGCTGGCGATCAAAGATT
TCTGGCAAGTGGATGATAGAACAATTGTGTTTGTTGCGGATCCTACATTTGGCAACATCTTGAACTTCAACGTCGGAGCATCTGTAGATTTAGACATTCCACGGAGCTTT
TGGAGCCGTTTGGCTGGAAAGTATGGAAACATATTTTATTGGAAAGAGAAGGGTGAAGATGCATCTATTGAATCAGCCGTCATGGCAATATCTAATTGCTTGAGAGAACC
AGTCGGCCCTAATAACTGTTCTGAGATAAAATAA

mRNA sequence

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Protein sequence

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MPLSRTLSFLQLLFSRTPSPSKIYGTNTATRIQKFSVMAFIHLHHHLPSPSLSFSKASLPVYRPSISASSRFSPRSFASQKSTDFSNLLLQFPPKSLSFALSGALALGIA
LSGVGFADAKVGVNKPELLPTEFTSVIDVAGFLSDGQEFRIKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGASVDLDIPRSF
WSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK

Spg012366 (gene) of Sponge gourd (cylindrica) v1 genome