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Spg012371 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012371
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein EMB-1-like
Genome locationscaffold1:15644642..15645685
RNA-Seq ExpressionSpg012371
SyntenySpg012371
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
GO:0048700 - acquisition of desiccation tolerance in seed (biological process)
InterPro domainsIPR000389 - Small hydrophilic plant seed protein
IPR022377 - Small hydrophilic plant seed protein, conserved site
IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033764.1 Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3897.8Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

XP_004148611.1 protein EMB-1 [Cucumis sativus]5.7e-3794.51Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMSGGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

XP_008464209.1 PREDICTED: protein EMB-1-like [Cucumis melo]2.0e-3796.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMSGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

XP_022144068.1 protein EMB-1-like [Momordica charantia]8.0e-3996.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+SGGERAAEEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

XP_022949998.1 protein EMB-1 [Cucurbita moschata]1.0e-3897.8Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

TrEMBL top hitse value%identityAlignment
A0A1S3CKY4 protein EMB-1-like9.5e-3896.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMSGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

A0A5D3E041 Protein EMB-1-like9.5e-3896.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMSGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

A0A6J1CSC5 protein EMB-1-like3.9e-3996.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+SGGERAAEEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

A0A6J1GDN9 protein EMB-15.0e-3997.8Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

A0A6J1ISS4 protein EMB-15.0e-3997.8Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGM GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

SwissProt top hitse value%identityAlignment
P17639 Protein EMB-12.5e-3584.62Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        M+S+QE+ ELDARARQGETVVPGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY EMGRKGGLSN+ MSGGERA +EG++IDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

P42755 Em protein H52.0e-3281.11Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        S +QER ELD  AR+GETVVPGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY+EMGRKGGLS    SGGERAA EG+EIDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

Q02973 Em-like protein GEA67.5e-3279.12Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS     GGE A EEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

Q05190 Late embryogenesis abundant protein B19.1A2.2e-3176.67Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        S +QER +LD +AR+GETVVPGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY EMGRKGGLS++  SGGERAA EG++IDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

Q08000 Em protein H24.9e-3176.67Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        S +QER +LD +AR+GETVVPGGTGGKSLEA E+LAEGRSRGGQTR+EQ+G EGY EMGRKGGLS +  SGGERAA EG++IDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

Arabidopsis top hitse value%identityAlignment
AT2G40170.1 Stress induced protein5.3e-3379.12Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS     GGE A EEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK

AT3G51810.1 Stress induced protein3.5e-2448Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------
        S +  R ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ                                            
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------

Query:  ----------------EMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK
                        EMGRKGGLS    SGGERA EEG+EIDESKF  K
Subjt:  ----------------EMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGGAGCAGGAAAGATGTGAACTGGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGAGGAAAGAGTCTTGAAGCTCAGGAGCACCTCGC
TGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGATACCAAGAGATGGGCCGAAAAGGAGGGTTGAGCAACTCAGGCATGTCAGGAGGAG
AGCGTGCTGCTGAAGAAGGGGTTGAAATTGACGAGTCCAAGTTCAGGACTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGGAGCAGGAAAGATGTGAACTGGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGAGGAAAGAGTCTTGAAGCTCAGGAGCACCTCGC
TGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGATACCAAGAGATGGGCCGAAAAGGAGGGTTGAGCAACTCAGGCATGTCAGGAGGAG
AGCGTGCTGCTGAAGAAGGGGTTGAAATTGACGAGTCCAAGTTCAGGACTAAATAA
Protein sequenceShow/hide protein sequence
MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNSGMSGGERAAEEGVEIDESKFRTK