; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012404 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012404
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationscaffold1:6847292..6850906
RNA-Seq ExpressionSpg012404
SyntenySpg012404
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]9.8e-9687.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA     S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

KAG7026854.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-9687.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA     S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

XP_022962974.1 polyadenylate-binding protein 3-like [Cucurbita moschata]9.8e-9687.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA     S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

XP_023003098.1 polyadenylate-binding protein 3-like [Cucurbita maxima]1.3e-9587.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GAA    S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]3.7e-9587.44Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGD+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+A    S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG
        EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYRSRRPY  P+FYSPY GYG
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG

Query:  KTPRFRRPMRYMPYY
        KTPRFRRPMRYMPYY
Subjt:  KTPRFRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein1.2e-9486.05Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        M+EEEHEVYGGEIPVEEGD+DMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+A    S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG
        EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPY  P+FYSPY GYG
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG

Query:  KTPRFRRPMRYMPYY
        KTPRFRRPMRYMPYY
Subjt:  KTPRFRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like3.1e-9586.98Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        M+EEEHEVYGGEIPVEEGD+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+A    S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG
        EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPY  P+FYSPY GYG
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPY-GYG

Query:  KTPRFRRPMRYMPYY
        KTPRFRRPMRYMPYY
Subjt:  KTPRFRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X18.9e-9586.92Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        M+EEEHEVYGGEIPVEE DVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAA    +       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
         PRFRR M+YMPYY
Subjt:  TPRFRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like4.7e-9687.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA     S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like6.2e-9687.38Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE
        MDEEEHEVYGGEIPVEEGDVDMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GAA    S       R++ +    VDYACTPE
Subjt:  MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK
        EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY  P+FYSPYGYGK
Subjt:  EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGK

Query:  TPRFRRPMRYMPYY
        TPR+RRPMRYMPYY
Subjt:  TPRFRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 29.1e-2852Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTD
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++   +      +  N            VDY+ TPEE+Q HF SCG+VNRVTIL D
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTD

Query:  KF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQ
        KF GHPKGFAY+EF E   V  ALLLN S LH R LKV  KRTNVPGM +
Subjt:  KF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQ

Q28165 Polyadenylate-binding protein 25.9e-2742.53Show/hide
Query:  DEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPEE
        ++EE E  G    + EGD    A +D    EL+ +K R++EMEEEA  L+E+Q +VEK+M     P  A   I S    +   A  +    VDY  T EE
Subjt:  DEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPEE

Query:  VQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMK---QYFPQ-----RYNPYMGYRSRRPYASPFF
        ++ HF  CG+VNRVTIL DKF GHPKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+    + FP+     R   Y   RSR  + S F 
Subjt:  VQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMK---QYFPQ-----RYNPYMGYRSRRPYASPFF

Query:  YSPYGYGKTPRFRRPMRYMPY
          P G     R R    Y PY
Subjt:  YSPYGYGKTPRFRRPMRYMPY

Q93VI4 Polyadenylate-binding protein 13.7e-6160Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSC
        DE+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  +        V  
Subjt:  DEEEHEVYGGEIP-VEEGDVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSC

Query:  RALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
        R++ +    VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R 
Subjt:  RALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS

Query:  RRPYASPFFYSPYGYGKTPRFRRPMRYMPY
          P     FY PY YG+ PRFRRPMRY PY
Subjt:  RRPYASPFFYSPYGYGKTPRFRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 29.2e-8173.54Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLG
        M+EEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  AA  ++    V  R++ +  
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLG

Query:  MMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASP
          VDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP+ SP
Subjt:  MMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASP

Query:  FFYSPYGYGKTPRFRRPMRYMPY
        + YSPYGYGK PRFRRPMRYMPY
Subjt:  FFYSPYGYGKTPRFRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 32.4e-8174.43Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD
        M+EEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  AA  +     V  R++ +    VD
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD

Query:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS
        YACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+  P+FYS
Subjt:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS

Query:  PYGYGKTPRFRRPMRYMPY
        PYGYGK PRFRRPMRYMPY
Subjt:  PYGYGKTPRFRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-8274.43Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD
        M+EEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  AA  +     V  R++ +    VD
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD

Query:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS
        YACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+  P+FYS
Subjt:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS

Query:  PYGYGKTPRFRRPMRYMPY
        PYGYGK PRFRRPMRYMPY
Subjt:  PYGYGKTPRFRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-7473.17Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD
        M+EEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  AA  +     V  R++ +    VD
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVD

Query:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS
        YACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+  P+FYS
Subjt:  YACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYS

Query:  PYGYG
        PYGYG
Subjt:  PYGYG

AT5G10350.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-5684.3Show/hide
Query:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFF
        VDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+  P+F
Subjt:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFF

Query:  YSPYGYGKTPRFRRPMRYMPY
        YSPYGYGK PRFRRPMRYMPY
Subjt:  YSPYGYGKTPRFRRPMRYMPY

AT5G51120.1 polyadenylate-binding protein 12.6e-6260Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSC
        DE+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  +        V  
Subjt:  DEEEHEVYGGEIP-VEEGDVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSC

Query:  RALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
        R++ +    VDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R 
Subjt:  RALLLLGMMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS

Query:  RRPYASPFFYSPYGYGKTPRFRRPMRYMPY
          P     FY PY YG+ PRFRRPMRY PY
Subjt:  RRPYASPFFYSPYGYGKTPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.6e-8273.54Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLG
        M+EEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  AA  ++    V  R++ +  
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLG

Query:  MMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASP
          VDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP+ SP
Subjt:  MMVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASP

Query:  FFYSPYGYGKTPRFRRPMRYMPY
        + YSPYGYGK PRFRRPMRYMPY
Subjt:  FFYSPYGYGKTPRFRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGCGACGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTCGACGAGATGAA
GAAGCGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCAGCCGGTGCGGCTGCGAAGA
TTAGATCATTTGCATGCAATGTTAGTTGCAGAGCATTGTTGCTGCTGGGAATGATGGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGT
ACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGTCATCCGAAGGGCTTCGCTTATGTGGAGTTCCTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTTTTAAACGA
GTCAGAATTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTAATGTTCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTATATGGGTTATAGGTCCA
GGAGGCCTTACGCATCCCCCTTTTTTTACTCACCATATGGATATGGGAAGACGCCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGCGACGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTCGACGAGATGAA
GAAGCGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCAGCCGGTGCGGCTGCGAAGA
TTAGATCATTTGCATGCAATGTTAGTTGCAGAGCATTGTTGCTGCTGGGAATGATGGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGT
ACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGTCATCCGAAGGGCTTCGCTTATGTGGAGTTCCTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTTTTAAACGA
GTCAGAATTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTAATGTTCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTATATGGGTTATAGGTCCA
GGAGGCCTTACGCATCCCCCTTTTTTTACTCACCATATGGATATGGGAAGACGCCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
Protein sequenceShow/hide protein sequence
MDEEEHEVYGGEIPVEEGDVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAAKIRSFACNVSCRALLLLGMMVDYACTPEEVQQHFQSCG
TVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYASPFFYSPYGYGKTPRFRRPMRYMPYY