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Spg012416 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012416
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold1:20968852..20972280
RNA-Seq ExpressionSpg012416
SyntenySpg012416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]7.4e-0458.54Show/hide
Query:  DLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
        DLEEL+ Q D PFT+E+M+ +VP KFK+PT  P+DG  +PV
Subjt:  DLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
TrEMBL top hitse value%identityAlignment
A0A6J1E1E7 uncharacterized protein LOC1110255483.6e-0458.54Show/hide
Query:  DLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
        DLEEL+ Q D PFT+E+M+ +VP KFK+PT  P+DG  +PV
Subjt:  DLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
A0A7J0DBQ5 Retrotrans_gag domain-containing protein7.9e-0436.08Show/hide
Query:  AAEAEARAAEAEARLAKA-EAKKDNLP-WKTELLNTLKELGNSQGYLQKLKDSGAQDLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
        A EA++ A +++A+   A E   +  P W  ++     +L    G +  +K+ G   +EELI++ D PFT  VM+  +P KFK+PT  P+DG KDP+
Subjt:  AAEAEARAAEAEARLAKA-EAKKDNLP-WKTELLNTLKELGNSQGYLQKLKDSGAQDLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAATCGCCTTCTTCGGTGCTAACACCGTCATCGCCACCGTGGGAGGTGCTACTTCTTGTCGCGGAACGCCTCGACCCTAAAACCCTCGCCATCGCCTCGTGTAC
GCGGTCGTTGTCCGCCGTCACCACCACCCCGTACCTTGGAAACTCACCCTCTTCCTCTCCGACCTTGTCTTCGTCAACGTCTCCTCCATTGACAAAAGCAATTTTGGACC
ACCCCGACGTACAAGGAGCTAACGAGGACAACCGGGGAAAAATCGGGCTGGGAGATGGACCCAAGAAGCGAAACCGGCAAGTGAGAGGGCCGAGACCAAAGGGGTCGGGC
TCTTGGCCCGACCCCCTACTTGGCCTCGGCCCGCTCGTGCGGGCCGAGCCTGTCCGGCTCCGTTTGGTCCCTACCGCCTCTGGCCGCCCCGGTTTCGCCTGCATCGGAGG
CGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTCCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGTACGTGAAGGTCAGGATTCTGACG
CCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGC
TTGATTAGAGACCCAAAGAAAGGGAATGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATCGAAAGGAAAGAAGACCAACAACGCAACCAGCAAGGTCAGGGGGCT
GAAGCGTGCAGAGCGCACAGTATTGAGGAGCCCAGAGCCAAGTACCAGCCGTGGAACAGACCTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAGACTGCCAAGT
CCGAGGCCAGAGCTGTCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCAAGGCCGAGGCCAAGAAAGACAATCTCCCT
TGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTGGAAATTCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGT
TGACCCGCCCTTCACAAAAGAAGTCATGAAAGCCGAGGTGCCTCAGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAAGAAAGACCCTGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAATCGCCTTCTTCGGTGCTAACACCGTCATCGCCACCGTGGGAGGTGCTACTTCTTGTCGCGGAACGCCTCGACCCTAAAACCCTCGCCATCGCCTCGTGTAC
GCGGTCGTTGTCCGCCGTCACCACCACCCCGTACCTTGGAAACTCACCCTCTTCCTCTCCGACCTTGTCTTCGTCAACGTCTCCTCCATTGACAAAAGCAATTTTGGACC
ACCCCGACGTACAAGGAGCTAACGAGGACAACCGGGGAAAAATCGGGCTGGGAGATGGACCCAAGAAGCGAAACCGGCAAGTGAGAGGGCCGAGACCAAAGGGGTCGGGC
TCTTGGCCCGACCCCCTACTTGGCCTCGGCCCGCTCGTGCGGGCCGAGCCTGTCCGGCTCCGTTTGGTCCCTACCGCCTCTGGCCGCCCCGGTTTCGCCTGCATCGGAGG
CGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTCCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGTACGTGAAGGTCAGGATTCTGACG
CCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAACTCCATGAGGGGGGC
TTGATTAGAGACCCAAAGAAAGGGAATGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATCGAAAGGAAAGAAGACCAACAACGCAACCAGCAAGGTCAGGGGGCT
GAAGCGTGCAGAGCGCACAGTATTGAGGAGCCCAGAGCCAAGTACCAGCCGTGGAACAGACCTGAGAAATCTGATCGAGGAAAAGCGCAAAATGGCCAAGACTGCCAAGT
CCGAGGCCAGAGCTGTCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCAAGGCCGAGGCCAAGAAAGACAATCTCCCT
TGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTGGAAATTCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGT
TGACCCGCCCTTCACAAAAGAAGTCATGAAAGCCGAGGTGCCTCAGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAAGAAAGACCCTGTGTAG
Protein sequenceShow/hide protein sequence
MEQSPSSVLTPSSPPWEVLLLVAERLDPKTLAIASCTRSLSAVTTTPYLGNSPSSSPTLSSSTSPPLTKAILDHPDVQGANEDNRGKIGLGDGPKKRNRQVRGPRPKGSG
SWPDPLLGLGPLVRAEPVRLRLVPTASGRPGFACIGGGVASTTPVCRFPLLQATSSPSSTNLPLVVREGQDSDAKIAALEDKVKGMNRSLSRILQILDKPGPSTKLHEGG
LIRDPKKGNEPVEYVDESETESKGKKTNNATSKVRGLKRAERTVLRSPEPSTSRGTDLRNLIEEKRKMAKTAKSEARAVEAEARAAEAEARAAEAEARLAKAEAKKDNLP
WKTELLNTLKELGNSQGYLQKLKDSGAQDLEELIDQVDPPFTKEVMKAEVPQKFKVPTFTPYDGKKDPV