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Spg012446 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012446
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:6487642..6492548
RNA-Seq ExpressionSpg012446
SyntenySpg012446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036273.1 hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa]1.3e-1586.44Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRRED--SVKPPKTAHH-GAAVAGKTSKKVHP
        MGASCARVYVMKKKAEEKLQRMEQER+GRRED  SVKPPKTAHH G  +AGK+SKKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRRED--SVKPPKTAHH-GAAVAGKTSKKVHP

KAG6594855.1 hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1583.93Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGAAVAGKTSKKVHP
        +GASCARVYVMKKK EEKLQRMEQE+AGRRED VKP KTAHHG A AG T KKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGAAVAGKTSKKVHP

KAG6604014.1 hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1375.86Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHH--GAAVAGKTSKKVHP
        MGA+CARVYVM+KK EEKL+RMEQERAGR ED+VKPPK+AHH  G  +AGK  KKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHH--GAAVAGKTSKKVHP

KGN48780.1 hypothetical protein Csa_002943 [Cucumis sativus]1.5e-1687.72Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGA-AVAGKTSKKVHP
        MGASCARVYVMKKKAEEKLQRMEQER+GRREDSVKPPKT+HH A  +AGK+SKKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGA-AVAGKTSKKVHP

TrEMBL top hitse value%identityAlignment
A0A0A0KGB8 Uncharacterized protein7.2e-1787.72Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGA-AVAGKTSKKVHP
        MGASCARVYVMKKKAEEKLQRMEQER+GRREDSVKPPKT+HH A  +AGK+SKKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGA-AVAGKTSKKVHP

A0A5A7T065 Uncharacterized protein6.1e-1686.44Show/hide
Query:  MGASCARVYVMKKKAEEKLQRMEQERAGRRED--SVKPPKTAHH-GAAVAGKTSKKVHP
        MGASCARVYVMKKKAEEKLQRMEQER+GRRED  SVKPPKTAHH G  +AGK+SKKVHP
Subjt:  MGASCARVYVMKKKAEEKLQRMEQERAGRRED--SVKPPKTAHH-GAAVAGKTSKKVHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTAGCTGCGCTAGGGTTTATGTTATGAAAAAGAAGGCCGAGGAGAAACTTCAGAGGATGGAGCAGGAGAGAGCTGGCAGAAGGGAAGACTCGGTCAAACCTCC
AAAAACCGCCCATCACGGCGCCGCCGTTGCCGGAAAAACCAGTAAAAAAGTCCATCCCGTAGTACATTCGCATAGCCTTACGCTTTTTCAATGGCAATTGGAGCTCCATG
TTGGCTGCGTTTTCGGTCTTTTTAACATCATTGCGATTGCGACAACGCTTCTCACGTCGGAGGCACAAGGCTTAGCATATGTTGTGCAGGGACTTGGGCATGACAATTTT
CAACATCTGAATCTCTGGCATCTATATTGCATAGGTTTAGGAGTGTTTCGTGAGGTAGCAAGCTTAGGGTATGAGCACGGGGGCAAAGACGAGCTGGGAATGAGCGAGGC
TGGAGCAATTTTTGTAGCTAGCTTAGTGTTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTAGCTGCGCTAGGGTTTATGTTATGAAAAAGAAGGCCGAGGAGAAACTTCAGAGGATGGAGCAGGAGAGAGCTGGCAGAAGGGAAGACTCGGTCAAACCTCC
AAAAACCGCCCATCACGGCGCCGCCGTTGCCGGAAAAACCAGTAAAAAAGTCCATCCCGTAGTACATTCGCATAGCCTTACGCTTTTTCAATGGCAATTGGAGCTCCATG
TTGGCTGCGTTTTCGGTCTTTTTAACATCATTGCGATTGCGACAACGCTTCTCACGTCGGAGGCACAAGGCTTAGCATATGTTGTGCAGGGACTTGGGCATGACAATTTT
CAACATCTGAATCTCTGGCATCTATATTGCATAGGTTTAGGAGTGTTTCGTGAGGTAGCAAGCTTAGGGTATGAGCACGGGGGCAAAGACGAGCTGGGAATGAGCGAGGC
TGGAGCAATTTTTGTAGCTAGCTTAGTGTTGAGATGA
Protein sequenceShow/hide protein sequence
MGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGAAVAGKTSKKVHPVVHSHSLTLFQWQLELHVGCVFGLFNIIAIATTLLTSEAQGLAYVVQGLGHDNF
QHLNLWHLYCIGLGVFREVASLGYEHGGKDELGMSEAGAIFVASLVLR