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Spg012452 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012452
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein-serine/threonine phosphatase
Genome locationscaffold1:15361804..15368686
RNA-Seq ExpressionSpg012452
SyntenySpg012452
Gene Ontology termsGO:0070940 - dephosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008420 - RNA polymerase II CTD heptapeptide repeat phosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022978090.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1 [Cucurbita maxima]2.6e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
XP_022978092.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2 [Cucurbita maxima]2.6e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
XP_022978093.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X3 [Cucurbita maxima]2.6e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
XP_023544414.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-1375Show/hide
Query:  ENSKKASDEPEGTHSDSAN----QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN    QQHVQKR SSPRSFPSKRSKED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN----QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
XP_023544415.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2 [Cucurbita pepo subsp. pepo]1.5e-1375Show/hide
Query:  ENSKKASDEPEGTHSDSAN----QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN    QQHVQKR SSPRSFPSKRSKED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN----QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
TrEMBL top hitse value%identityAlignment
A0A6J1GDZ4 Protein-serine/threonine phosphatase1.1e-1273.13Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        E + +A DEP   +SDSAN   QQHVQKR SSPRSFPSKRSKED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
A0A6J1GEP9 Protein-serine/threonine phosphatase1.1e-1273.13Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        E + +A DEP   +SDSAN   QQHVQKR SSPRSFPSKRSKED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
A0A6J1IK74 Protein-serine/threonine phosphatase1.3e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
A0A6J1IP39 Protein-serine/threonine phosphatase1.3e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
A0A6J1IS06 Protein-serine/threonine phosphatase1.3e-1374.63Show/hide
Query:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
        EN+ +ASDEP   +SDSAN   QQHVQKR SSPRSFPSKRS+ED+VHG QY+AAAS +QQKNGHSIT
Subjt:  ENSKKASDEPEGTHSDSAN---QQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAAS-RQQKNGHSIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCTCTTATGCAGGCCTCTGAAAATTCTAAAAAGGCTTCTGATGAACCTGAGGGTACTCATTCTGATTCGGCAAATCAACAGCACGTACAGAAGCGGCAAAGTTC
CCCGAGATCATTTCCCAGTAAACGATCAAAGGAAGATCAAGTACATGGTTCACAATATGTAGCAGCAGCTTCACGGCAGCAGAAGAATGGGCATTCCATTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCCTCTTATGCAGGCCTCTGAAAATTCTAAAAAGGCTTCTGATGAACCTGAGGGTACTCATTCTGATTCGGCAAATCAACAGCACGTACAGAAGCGGCAAAGTTC
CCCGAGATCATTTCCCAGTAAACGATCAAAGGAAGATCAAGTACATGGTTCACAATATGTAGCAGCAGCTTCACGGCAGCAGAAGAATGGGCATTCCATTACATGA
Protein sequenceShow/hide protein sequence
MLPLMQASENSKKASDEPEGTHSDSANQQHVQKRQSSPRSFPSKRSKEDQVHGSQYVAAASRQQKNGHSIT