CuGenDBv2

Gene ID	Spg012514
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Beta-galactosidase
Genome location	scaffold1:5145337..5146437
RNA-Seq Expression	Spg012514
Synteny	Spg012514
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005773 - vacuole (cellular component) GO:0016020 - membrane (cellular component) GO:0048046 - apoplast (cellular component) GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036665.1 beta-galactosidase 17 isoform X2 [Cucumis melo var. makuwa]

6.7e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

XP_008464017.1 PREDICTED: beta-galactosidase 17 isoform X2 [Cucumis melo]

6.7e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

XP_011652351.1 beta-galactosidase 17 [Cucumis sativus]

1.3e-26

87.67

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES+DQSFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

XP_016903129.1 PREDICTED: beta-galactosidase 17 isoform X3 [Cucumis melo]

6.7e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

XP_016903131.1 PREDICTED: beta-galactosidase 17 isoform X4 [Cucumis melo]

6.7e-26

86.3

Show/hide

Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGB2 Beta-galactosidase

6.5e-27

87.67

Show/hide

Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES+DQSFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

A0A1S3CKJ1 Beta-galactosidase

3.2e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

A0A1S4E4H1 Beta-galactosidase

3.2e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

A0A1S4E4H7 Beta-galactosidase

3.2e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

A0A5D3E3M2 Beta-galactosidase

3.2e-26

86.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        VAVSEEPL MES D+SFGFLLY TEYVAKDN DGH+LFI EVHDRAQ+FLSCSSKNKGV PTSVGIIER SNR
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

SwissProt top hits

e value

%identity

Alignment

Q0DGD7 Beta-galactosidase 8

1.1e-10

Show/hide

Query:  NLSRQRCVAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR
        N+S    VA SE+PL ME + Q FGFLLY +EY  K ++   IL I +VHDRAQ+F+SCS  +    P  VGI+ER S++
Subjt:  NLSRQRCVAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

Q93Z24 Beta-galactosidase 17

7.7e-09

47.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR
        V  S  P+ MESV Q FGFLLY + Y+AK +  G+ L I +VHDRAQ+F+SC S++  V     +G  ER +N+
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR

Arabidopsis top hits

e value

%identity

Alignment

AT1G72990.1 beta-galactosidase 17

5.5e-10

47.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR
        V  S  P+ MESV Q FGFLLY + Y+AK +  G+ L I +VHDRAQ+F+SC S++  V     +G  ER +N+
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR

AT1G72990.2 beta-galactosidase 17

5.5e-10

47.3

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Query:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR
        V  S  P+ MESV Q FGFLLY + Y+AK +  G+ L I +VHDRAQ+F+SC S++  V     +G  ER +N+
Subjt:  VAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTS-VGIIERSSNR

Sequences

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CDS sequence

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ATGTTCCCGAAGCACGTTCTGTTCCATTCATGGATGCGAGATTTGATGCCTCTTAACTTCTCCATGAATTTATCTCGTCAACGTTGTGTTGCTGTATCTGAAGAACCACT
ATTAATGGAGTCTGTGGATCAGAGCTTTGGATTTCTGTTATATGCGACAGAATATGTGGCCAAGGATAATGCAGATGGACACATTTTATTTATACTAGAGGTGCATGATC
GAGCACAAATGTTCCTTTCTTGCTCTTCTAAAAACAAGGGCGTATGGCCAACTTCTGTTGGCATTATTGAAAGATCGTCAAATCGGTGA

mRNA sequence

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Protein sequence

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MFPKHVLFHSWMRDLMPLNFSMNLSRQRCVAVSEEPLLMESVDQSFGFLLYATEYVAKDNADGHILFILEVHDRAQMFLSCSSKNKGVWPTSVGIIERSSNR

Spg012514 (gene) of Sponge gourd (cylindrica) v1 genome