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Spg012543 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012543
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionACT domain-containing protein
Genome locationscaffold1:16225623..16227721
RNA-Seq ExpressionSpg012543
SyntenySpg012543
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595565.1 hypothetical protein SDJN03_12118, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4488.98Show/hide
Query:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV
        MGSRERKKAAA SS+NH K  E  ASTSSSAVVNVESL RGFLINV+LE+NSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE TKI+KPQV
Subjt:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV

Query:  VKKAVKQAIKEWSESNEQ
        VKKAVKQAIKEWSESN Q
Subjt:  VKKAVKQAIKEWSESNEQ

XP_022950375.1 uncharacterized protein LOC111453491 [Cucurbita moschata]1.9e-4893.22Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASSLNHHKSKE RASTSSSAVVNVE+LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIK QVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSESNEQA
        K AVKQAIKEWSESN QA
Subjt:  KKAVKQAIKEWSESNEQA

XP_022966518.1 uncharacterized protein LOC111466169 [Cucurbita maxima]6.3e-4487.29Show/hide
Query:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV
        MGSRERKKAAA SS+NH K  E  ASTSSSAVVNVESL RGFLINV++E+NSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE TK++KPQV
Subjt:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV

Query:  VKKAVKQAIKEWSESNEQ
        VKKAVKQAIKEWSESN Q
Subjt:  VKKAVKQAIKEWSESNEQ

XP_022977370.1 uncharacterized protein LOC111477723 [Cucurbita maxima]8.4e-4994.07Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASSLNHHKSKE RASTSSSAVVNVE LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIK QVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSESNEQA
        K AVKQAIKEWSESN QA
Subjt:  KKAVKQAIKEWSESNEQA

XP_038882922.1 uncharacterized protein LOC120074022 [Benincasa hispida]1.6e-4794.07Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASS  HHKSKE RASTSSSA+VNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIK QVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSESNEQA
        K AVKQAIKEWSESN QA
Subjt:  KKAVKQAIKEWSESNEQA

TrEMBL top hitse value%identityAlignment
A0A6J1CQF9 uncharacterized protein LOC1110137975.2e-4491.23Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASS N HKSKE RASTSSSA VNVES+ERGF+INV+LERNSPGLLVRILE FEKLGLEVLDA VSCSD FQLQAVGEENEGTKIIKPQVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSES
        KKAVKQAIKEWSES
Subjt:  KKAVKQAIKEWSES

A0A6J1EGT3 uncharacterized protein LOC1114324148.8e-4486.44Show/hide
Query:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV
        MGSRERKKAAA SS+NH K  E  ASTSSSAVVNVESL RGFLINV+LE+NSPGLLVRIL+AFEKLGLEVLDANVSCSDCFQLQAVGEENE TKI+KP+V
Subjt:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV

Query:  VKKAVKQAIKEWSESNEQ
        VK+AVKQAIKEWSESN Q
Subjt:  VKKAVKQAIKEWSESNEQ

A0A6J1GFJ5 uncharacterized protein LOC1114534919.1e-4993.22Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASSLNHHKSKE RASTSSSAVVNVE+LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIK QVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSESNEQA
        K AVKQAIKEWSESN QA
Subjt:  KKAVKQAIKEWSESNEQA

A0A6J1HSD7 uncharacterized protein LOC1114661693.0e-4487.29Show/hide
Query:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV
        MGSRERKKAAA SS+NH K  E  ASTSSSAVVNVESL RGFLINV++E+NSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENE TK++KPQV
Subjt:  MGSRERKKAAA-SSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQV

Query:  VKKAVKQAIKEWSESNEQ
        VKKAVKQAIKEWSESN Q
Subjt:  VKKAVKQAIKEWSESNEQ

A0A6J1IM47 uncharacterized protein LOC1114777234.1e-4994.07Show/hide
Query:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV
        MGSRERKKAAASSLNHHKSKE RASTSSSAVVNVE LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDA+VSCSDCFQLQAVGEENEGTKIIK QVV
Subjt:  MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVV

Query:  KKAVKQAIKEWSESNEQA
        K AVKQAIKEWSESN QA
Subjt:  KKAVKQAIKEWSESNEQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein8.8e-0432.93Show/hide
Query:  VNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKI-----IKPQVVKKAVKQAI
        V VE +   F + +   R     LV ILEAFE++GL V  A  SC D F ++A+       K+     +   +VK  VK ++
Subjt:  VNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKI-----IKPQVVKKAVKQAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)8.2e-1841.74Show/hide
Query:  ERKKAAASSLNHHKSKETRASTSS---SAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVVK
        ++ K      N   + E  +S  +   + +V VE+L++GF+INVF  +N PG+LV +LEAFE +GL VL+A  SC+D F L A+G ENE  + +  + VK
Subjt:  ERKKAAASSLNHHKSKETRASTSS---SAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVVK

Query:  KAVKQAIKEWSESNE
        +AV  AI+ W E N+
Subjt:  KAVKQAIKEWSESNE

AT3G56220.1 transcription regulators7.7e-1640.35Show/hide
Query:  ERKKAAASSLNHHKSKET--RASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVG-EENEGTKIIKPQVVK
        ++ K     +N+  + E   R S+  + +V VE+LE+GF+I V   +N  G+LV +LE FE LGL+V++A VSC+D F L A+G   N+    I  + VK
Subjt:  ERKKAAASSLNHHKSKET--RASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVG-EENEGTKIIKPQVVK

Query:  KAVKQAIKEWSESN
        +AV +AI+ WS+S+
Subjt:  KAVKQAIKEWSESN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGAGAGAGCGAAAGAAAGCAGCAGCTTCTTCTCTGAATCATCACAAGTCCAAAGAAACTCGTGCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTTT
AGAGAGGGGATTTCTAATAAACGTGTTTTTGGAAAGGAATTCTCCGGGATTGTTGGTTCGGATTCTAGAAGCCTTTGAGAAATTGGGACTCGAAGTCCTCGACGCCAACG
TGTCTTGTTCCGATTGCTTCCAACTCCAGGCTGTTGGGGAAGAGAATGAAGGCACCAAAATCATAAAGCCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAATCAAGGAA
TGGAGTGAAAGTAATGAGCAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGAGAGAGCGAAAGAAAGCAGCAGCTTCTTCTCTGAATCATCACAAGTCCAAAGAAACTCGTGCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTTT
AGAGAGGGGATTTCTAATAAACGTGTTTTTGGAAAGGAATTCTCCGGGATTGTTGGTTCGGATTCTAGAAGCCTTTGAGAAATTGGGACTCGAAGTCCTCGACGCCAACG
TGTCTTGTTCCGATTGCTTCCAACTCCAGGCTGTTGGGGAAGAGAATGAAGGCACCAAAATCATAAAGCCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAATCAAGGAA
TGGAGTGAAAGTAATGAGCAGGCATGA
Protein sequenceShow/hide protein sequence
MGSRERKKAAASSLNHHKSKETRASTSSSAVVNVESLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKPQVVKKAVKQAIKE
WSESNEQA