; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012554 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012554
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-CH-type domain-containing protein
Genome locationscaffold1:15002604..15004427
RNA-Seq ExpressionSpg012554
SyntenySpg012554
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]2.4e-7386.47Show/hide
Query:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN
        MAALETAGVDLEEG  G GG GGRRAEA    GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQN
Subjt:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN

Query:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         VG HELE MEQLHE NNGT+ST TVAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-7384.71Show/hide
Query:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN
        MAALETAGVDLEEG RGG GG G  A      GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQN
Subjt:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN

Query:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         VG HELE MEQLHE NNGT+ST TVAASVAA+P GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]1.9e-6274.85Show/hide
Query:  MAALETAG-VDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQ
        +AA++T G  DLE+G      GG RR EA           ERDCRICHLGLES+S ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV 
Subjt:  MAALETAG-VDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQ

Query:  NVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        NV+G HE+EP+EQL ESNN TVST TVA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  NVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]9.3e-7386.47Show/hide
Query:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN
        MAALETAGVDLEEG  G GG GGRRAEA    GEVKVH ERDCRICHLGLESNSSECG AIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHS+VQN
Subjt:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQN

Query:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        V G HELE MEQLHE NNGT+ST TVAASV AAP GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  VVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]4.9e-6679.07Show/hide
Query:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVG-EVKV-HLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVV
        MAALETAG DLE+G R         AE GSGVG EVKV +LERDCRICHLGL SNS+E G+ IELGC CKNDL+ AHKHCAEAWFKIRGNKTCEICHS+V
Subjt:  MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVG-EVKV-HLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVV

Query:  QNVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +NV+   E E  EQLHESNNGTVSTATVAASVAA P GGRSFW VHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  QNVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH23.7e-5172.6Show/hide
Query:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA
        A SG  E+K+HL   E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E  EQ +E+N+   STA
Subjt:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA

Query:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        T A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A1U8HUU1 uncharacterized protein LOC1078897483.7e-5172.6Show/hide
Query:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA
        A SG  E+K+HL   E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E  EQ +E+N+   STA
Subjt:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA

Query:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        T A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A2P5YEN9 RING-CH-type domain-containing protein3.7e-5172.6Show/hide
Query:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA
        A SG  E+K+HL   E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHS+ +NVVG +E+E  EQ +E+N+   STA
Subjt:  AGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTA

Query:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        T A S AA+    RSFW  HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  TVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1CWG7 uncharacterized protein LOC111015024 isoform X25.7e-5272.11Show/hide
Query:  EAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVST
        E  +G+ E+KVHL   ERDCRICHLGLESNS E GI IELGCSCK+DLAAAHKHCAE WFKIRGNKTCEICHS+ +N++G HE+E  EQ  ESNN + ST
Subjt:  EAGSGVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVST

Query:  ATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        A VAAS+ ++    +SFW+ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  ATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

A0A6J1DBE4 uncharacterized protein LOC1110194419.4e-6374.85Show/hide
Query:  MAALETAG-VDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQ
        +AA++T G  DLE+G      GG RR EA           ERDCRICHLGLES+S ECGI IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHSVV 
Subjt:  MAALETAG-VDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQ

Query:  NVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        NV+G HE+EP+EQL ESNN TVST TVA SV   P GGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
Subjt:  NVVGGHELEPMEQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein6.9e-3454.74Show/hide
Query:  ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHEL--EPMEQLHESNNGTVSTATVAASVAAAPGGG
        E+DCRICHLG+E++    G AIELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC SV +NV G +E+    ME+  E  NG           AA  GGG
Subjt:  ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHEL--EPMEQLHESNNGTVSTATVAASVAAAPGGG

Query:  RSF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS
         +     WQ  RV+N +LACMVF F ISW+FHF+V S
Subjt:  RSF----WQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G01070.1 RING/FYVE/PHD zinc finger superfamily protein5.9e-1761.4Show/hide
Query:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNK
        G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNK
Subjt:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNK

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein1.8e-3451.45Show/hide
Query:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTATVAASVAA
        G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNKTCEIC S+ QN     + E  +   E+N   V        VA 
Subjt:  GEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTATVAASVAA

Query:  APGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
        +    R   + +R LNFLL CMV AFVISW FHFN+PS
Subjt:  APGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein3.3e-4462.94Show/hide
Query:  GVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTATVA
        G+ E  VHL   ERDCRICH+ L++ + E G+ IELGCSCK DLAAAHKHCAE WFKI+GNK CE+C S+  NVVG  E+E  E  +E+N   V   T+ 
Subjt:  GVGEVKVHL---ERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLHESNNGTVSTATVA

Query:  ASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS
         S       GRSFWQ HR LNFLLACMVFAFVISWLFHFNVPS
Subjt:  ASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein1.0e-2439.09Show/hide
Query:  LETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSE-------------------------------CGIAIELGCSCKNDLA
        LE+ GV   E     GG   R         + K    RDCRICHL LE+N                                   G+ ++LGCSCK DL 
Subjt:  LETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSE-------------------------------CGIAIELGCSCKNDLA

Query:  AAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLH-ESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV
         AH  CAE WFKI+GN TCEIC ++  NV G       EQ + ES   T S A    S+       R  W    V+NFLLA MVFAFV+SWLFHF V
Subjt:  AAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPMEQLH-ESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTTGGAGACTGCCGGAGTTGATTTGGAGGAAGGTGACCGTGGCGGCGGCGGCGGCGGTGGTCGGCGGGCGGAGGCTGGAAGTGGGGTTGGTGAAGTGAAGGT
GCATTTGGAAAGGGATTGTAGGATTTGCCATTTGGGTTTGGAAAGCAATAGCAGTGAGTGTGGGATTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTG
CCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTGTTGTACAAAATGTCGTTGGAGGACATGAACTAGAACCAATG
GAGCAACTCCATGAGTCGAACAACGGGACGGTATCGACAGCCACAGTTGCAGCGTCGGTGGCTGCCGCTCCCGGTGGTGGCCGGAGCTTTTGGCAGGTTCACCGGGTCCT
GAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTGTTTCATTTCAATGTGCCATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTTTGGAGACTGCCGGAGTTGATTTGGAGGAAGGTGACCGTGGCGGCGGCGGCGGCGGTGGTCGGCGGGCGGAGGCTGGAAGTGGGGTTGGTGAAGTGAAGGT
GCATTTGGAAAGGGATTGTAGGATTTGCCATTTGGGTTTGGAAAGCAATAGCAGTGAGTGTGGGATTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTG
CCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTGTTGTACAAAATGTCGTTGGAGGACATGAACTAGAACCAATG
GAGCAACTCCATGAGTCGAACAACGGGACGGTATCGACAGCCACAGTTGCAGCGTCGGTGGCTGCCGCTCCCGGTGGTGGCCGGAGCTTTTGGCAGGTTCACCGGGTCCT
GAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTGTTTCATTTCAATGTGCCATCATAG
Protein sequenceShow/hide protein sequence
MAALETAGVDLEEGDRGGGGGGGRRAEAGSGVGEVKVHLERDCRICHLGLESNSSECGIAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSVVQNVVGGHELEPM
EQLHESNNGTVSTATVAASVAAAPGGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS