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Spg012565 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012565
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase_H2C2 domain-containing protein
Genome locationscaffold1:21084093..21085693
RNA-Seq ExpressionSpg012565
SyntenySpg012565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8683480.1 hypothetical protein F3Y22_tig00111207pilonHSYRG00012 [Hibiscus syriacus]1.1e-0537.27Show/hide
Query:  NRVSISWTPQQGRPVGRVAS-MFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVALTQ
        N++ +     +GRP+  V S   S+EIGI++R +I M   K KD+ D    + +ER L+ +D    + I+ F+ TH+S  KGWT   A E +EKMV L  
Subjt:  NRVSISWTPQQGRPVGRVAS-MFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVALTQ

Query:  EQASSSTPMD
             STP++
Subjt:  EQASSSTPMD

XP_022159083.1 uncharacterized protein LOC111025525 [Momordica charantia]1.1e-0542.11Show/hide
Query:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQ
        +G +RG    R++   G ++ + WT QQGRPVG  ++ F++EIG LAR YI  K AKKK+I       I++ LL +
Subjt:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQ

XP_038895319.1 uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]2.4e-0826.69Show/hide
Query:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG
        +E +E D          E +H  +S+ S      +V  N++          RG SRG+  N+   AT  R+ ++WTP QG+P+G +AS+F+ EIG+L R 
Subjt:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG

Query:  YIPMKYAKKKDIPDEVMTNIVERLLRQ-------------------------------------------------------------------------
        +IP+KY K+KDIP+E+   + E+LL Q                                                                         
Subjt:  YIPMKYAKKKDIPDEVMTNIVERLLRQ-------------------------------------------------------------------------

Query:  ----------------------------EDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVAL
                                    EDGTY+S IEVF  TH S +KGW D AA EA+E M+ L
Subjt:  ----------------------------EDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVAL

XP_038895320.1 uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]2.7e-0737.21Show/hide
Query:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG
        +E +E D          E +H  +S+ S      +V  N++          RG SRG+  N+   AT  R+ ++WTP QG+P+G +AS+F+ EIG+L R 
Subjt:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG

Query:  YIPMKYAKKKDIPDEVMTNIVERLLRQED
        +IP+KY K+KDIP+E+   + E+LL Q D
Subjt:  YIPMKYAKKKDIPDEVMTNIVERLLRQED

XP_038895321.1 uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]2.7e-0737.21Show/hide
Query:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG
        +E +E D          E +H  +S+ S      +V  N++          RG SRG+  N+   AT  R+ ++WTP QG+P+G +AS+F+ EIG+L R 
Subjt:  EEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSS--------ATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARG

Query:  YIPMKYAKKKDIPDEVMTNIVERLLRQED
        +IP+KY K+KDIP+E+   + E+LL Q D
Subjt:  YIPMKYAKKKDIPDEVMTNIVERLLRQED

TrEMBL top hitse value%identityAlignment
A0A2P6RMM0 Uncharacterized protein2.7e-0527.66Show/hide
Query:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWS
        RG +RG+  +++ E    ++ +++  + GRP G  A MF+ EIG   R + P+   K K++  E  T++++R++ + +     P E      WS
Subjt:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWS

A0A6A1V300 Uncharacterized protein1.2e-0527.42Show/hide
Query:  SSNSSATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHW
        +S S   RG +RG+   + + +   ++S+     +   V   A+  ST+I +L RG IP+   K  D+P EV   I++R+L+ ++   ++P E++++ + 
Subjt:  SSNSSATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHW

Query:  SEAKGWTDDAASEAHEKMVALTQE
        ++   WT + A E +E+M A  ++
Subjt:  SEAKGWTDDAASEAHEKMVALTQE

A0A6A1V390 Uncharacterized protein1.6e-0527.75Show/hide
Query:  VSSNSSATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVG--RVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRR
        ++S     +G +RGI    +++A+  R  ++     GR  G  + +SM S+ IG+L R ++P + +K K++PDEV + ++ R+L+  +   +SP  ++++
Subjt:  VSSNSSATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVG--RVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRR

Query:  THWSEAKGWTDDAASEAHEKMVALT---QEQASSSTPMDADEMLLFSEKDHQT---RLVRTEECLENQVREMK
        TH ++   WT   A +  EK+ AL    + +  S T ++    +L ++  +     RLVR EE    ++ EM+
Subjt:  THWSEAKGWTDDAASEAHEKMVALT---QEQASSSTPMDADEMLLFSEKDHQT---RLVRTEECLENQVREMK

A0A6A2YVZ8 Integrase_H2C2 domain-containing protein5.5e-0637.27Show/hide
Query:  NRVSISWTPQQGRPVGRVAS-MFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVALTQ
        N++ +     +GRP+  V S   S+EIGI++R +I M   K KD+ D    + +ER L+ +D    + I+ F+ TH+S  KGWT   A E +EKMV L  
Subjt:  NRVSISWTPQQGRPVGRVAS-MFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVALTQ

Query:  EQASSSTPMD
             STP++
Subjt:  EQASSSTPMD

A0A6J1DXU5 uncharacterized protein LOC1110255255.5e-0642.11Show/hide
Query:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQ
        +G +RG    R++   G ++ + WT QQGRPVG  ++ F++EIG LAR YI  K AKKK+I       I++ LL +
Subjt:  RGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAKKKDIPDEVMTNIVERLLRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATTTGGAAGAACAAATAGAAGAAGAGGAAGATGATGAAGATGATGAAGCAGATGAAGGTGAAGAAGAAGAAGATGAAGACGAGCATGAAAGATCATCGTTAAA
TAGCGATGAATTGATGTCGACATGGGTATCGTCTAATAGTAGTGCAACGCGTGGGGTGTCACGTGGAATTGGCACAAATAGAATTATTGAGGCTACTGGTAACAGAGTAA
GTATTTCATGGACTCCTCAGCAAGGCAGACCGGTGGGAAGAGTTGCCAGTATGTTTAGCACTGAAATTGGCATTTTGGCAAGAGGGTATATCCCCATGAAGTATGCGAAG
AAGAAAGACATTCCAGATGAAGTTATGACTAACATCGTAGAACGACTGTTGAGACAAGAAGACGGTACATACGTGAGCCCCATAGAAGTCTTCCGTCGAACTCATTGGTC
CGAAGCAAAGGGATGGACTGATGATGCAGCAAGTGAAGCACATGAAAAAATGGTAGCGTTGACCCAAGAACAGGCCAGCTCGAGTACACCAATGGATGCTGATGAAATGC
TACTGTTCTCGGAAAAAGACCATCAGACTCGCCTTGTAAGGACCGAAGAATGTTTGGAGAATCAAGTACGAGAAATGAAGGAATCAGAGGCTCGAGTGAAAGAACAAATG
AAAGAAGAAATGACAGAACTATTGGCCATGCAACATCAAGAGTATGAAATAAAATTTAGCCAAATGAATGAAATCTTAGAAAGATTCATTGGAGCAAATCCATCAGTTAG
AAAGGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATTTGGAAGAACAAATAGAAGAAGAGGAAGATGATGAAGATGATGAAGCAGATGAAGGTGAAGAAGAAGAAGATGAAGACGAGCATGAAAGATCATCGTTAAA
TAGCGATGAATTGATGTCGACATGGGTATCGTCTAATAGTAGTGCAACGCGTGGGGTGTCACGTGGAATTGGCACAAATAGAATTATTGAGGCTACTGGTAACAGAGTAA
GTATTTCATGGACTCCTCAGCAAGGCAGACCGGTGGGAAGAGTTGCCAGTATGTTTAGCACTGAAATTGGCATTTTGGCAAGAGGGTATATCCCCATGAAGTATGCGAAG
AAGAAAGACATTCCAGATGAAGTTATGACTAACATCGTAGAACGACTGTTGAGACAAGAAGACGGTACATACGTGAGCCCCATAGAAGTCTTCCGTCGAACTCATTGGTC
CGAAGCAAAGGGATGGACTGATGATGCAGCAAGTGAAGCACATGAAAAAATGGTAGCGTTGACCCAAGAACAGGCCAGCTCGAGTACACCAATGGATGCTGATGAAATGC
TACTGTTCTCGGAAAAAGACCATCAGACTCGCCTTGTAAGGACCGAAGAATGTTTGGAGAATCAAGTACGAGAAATGAAGGAATCAGAGGCTCGAGTGAAAGAACAAATG
AAAGAAGAAATGACAGAACTATTGGCCATGCAACATCAAGAGTATGAAATAAAATTTAGCCAAATGAATGAAATCTTAGAAAGATTCATTGGAGCAAATCCATCAGTTAG
AAAGGTATAG
Protein sequenceShow/hide protein sequence
MLNLEEQIEEEEDDEDDEADEGEEEEDEDEHERSSLNSDELMSTWVSSNSSATRGVSRGIGTNRIIEATGNRVSISWTPQQGRPVGRVASMFSTEIGILARGYIPMKYAK
KKDIPDEVMTNIVERLLRQEDGTYVSPIEVFRRTHWSEAKGWTDDAASEAHEKMVALTQEQASSSTPMDADEMLLFSEKDHQTRLVRTEECLENQVREMKESEARVKEQM
KEEMTELLAMQHQEYEIKFSQMNEILERFIGANPSVRKV