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Spg012567 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012567
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger protein 593
Genome locationscaffold1:12954943..12956754
RNA-Seq ExpressionSpg012567
SyntenySpg012567
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR013087 - Zinc finger C2H2-type
IPR022755 - Zinc finger, double-stranded RNA binding
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143276.1 zinc finger protein 593 [Cucumis sativus]2.2e-6095.8Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_008462489.1 PREDICTED: zinc finger protein 593 [Cucumis melo]2.6e-6196.64Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022143723.1 zinc finger protein 593 [Momordica charantia]7.9e-6398.32Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLMTGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022962632.1 zinc finger protein 593 [Cucurbita moschata]1.3e-6094.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVYD LKKP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

XP_022972762.1 zinc finger protein 593 [Cucurbita maxima]3.7e-6094.12Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHK+ARRTKFL+ GDDMVYD LKKP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

TrEMBL top hitse value%identityAlignment
A0A0A0KHA1 C2H2-type domain-containing protein1.0e-6095.8Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A1S3CH13 zinc finger protein 5931.2e-6196.64Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM+GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1CRE9 zinc finger protein 5933.8e-6398.32Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKR+KLMTGPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        AELAAGMGMPDNGPKLM+M
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1HD68 zinc finger protein 5936.1e-6194.96Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVYD LKKP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

A0A6J1I5Q7 zinc finger protein 5931.8e-6094.12Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD
        MGGKCPHRSVKKRRYSHK+ARRTKFL+ GDDMVYD LKKP+VERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLD
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLD

Query:  AELAAGMGMPDNGPKLMAM
        A+LAAGMGMPDNGPKLMAM
Subjt:  AELAAGMGMPDNGPKLMAM

SwissProt top hitse value%identityAlignment
B0BLT0 Zinc finger protein 5939.2e-1442.86Show/hide
Query:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYDELKKPDVE-RPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAEL
        H+S KK+  S   KT RR K L    D ++ ++K  + +   +  +D  LPG  Q+YCLHC RYF ++    EHFKTK H++R+K +    P+TQ +AE 
Subjt:  HRSVKKRRYSH--KTARRTKFLVKGDDMVYDELKKPDVE-RPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAEL

Query:  AAGMG
        AAGMG
Subjt:  AAGMG

Q08004 Bud site selection protein 207.3e-1138.61Show/hide
Query:  RYS---HKTARRTKFLVKGDDMVYDELKKPDVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMG
        RYS   +KT RRT+ L    D++Y++L   +  +  L  P+DE  PG+GQ+YC+HC +Y         H K K H++RVK + G  P+TQ  ++ AAG  
Subjt:  RYS---HKTARRTKFLVKGDDMVYDELKKPDVERPSL--PVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMG

Query:  M
        +
Subjt:  M

Q553S1 Zinc finger protein 593 homolog2.5e-1134.19Show/hide
Query:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQL
        MG    H     ++  +K AR TK   K  D ++DE++   +++ S   VD DLPGMGQ YC+HC ++F        H K K H+ RVK +    P++  
Subjt:  MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPS-LPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQL

Query:  DAELAAGMGMPDNGPKL
        ++++       DNG KL
Subjt:  DAELAAGMGMPDNGPKL

Q9P370 Zinc finger protein bud208.1e-1034.29Show/hide
Query:  VKKRRYSHKTAR----RTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAA
        V ++R  H        RT+   +  D ++++L + + +   LP+D DLPG+GQ+YC+ C RYF +      H K K H++R+K +    P+TQ +AE A 
Subjt:  VKKRRYSHKTAR----RTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAA

Query:  GMGMP
         +G P
Subjt:  GMGMP

Q9U239 Zinc finger protein 593 homolog1.6e-1036.54Show/hide
Query:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVER-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELA
        P    +K   S+KT +R     K  D ++++LK     +     +D DLPG GQ+YC+ C+R+F +   R  H KTK H+ RVK +    P+TQ +A  A
Subjt:  PHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVER-PSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELA

Query:  AGMG
         G G
Subjt:  AGMG

Arabidopsis top hitse value%identityAlignment
AT2G36930.1 zinc finger (C2H2 type) family protein3.1e-4975Show/hide
Query:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE
        G+CP R VKKRR SHKTARR KF VKGDD+VY EL+KP+ E   L +DEDLPGMGQ+YCLHCDRYF+NVSVRD+HFKTK+H+KRV +M G APH+QLDA+
Subjt:  GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAE

Query:  LAAGMGMPDNGPKLMA
        LA GMGMPDNGPKLM+
Subjt:  LAAGMGMPDNGPKLMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTCGCCGCACGAAATTTCTCGTCAAAGGCGATGATATGGTCTACGATGAGTT
GAAGAAACCCGACGTGGAGAGGCCTTCTCTACCTGTTGACGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTATCTGTGA
GGGACGAGCATTTCAAGACCAAGCGTCACAGGAAGCGGGTAAAACTAATGACGGGTCCTGCACCGCACACGCAACTGGACGCCGAGTTAGCTGCTGGGATGGGCATGCCT
GATAATGGTCCAAAGCTTATGGCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTCGCCGCACGAAATTTCTCGTCAAAGGCGATGATATGGTCTACGATGAGTT
GAAGAAACCCGACGTGGAGAGGCCTTCTCTACCTGTTGACGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTATCTGTGA
GGGACGAGCATTTCAAGACCAAGCGTCACAGGAAGCGGGTAAAACTAATGACGGGTCCTGCACCGCACACGCAACTGGACGCCGAGTTAGCTGCTGGGATGGGCATGCCT
GATAATGGTCCAAAGCTTATGGCAATGTGA
Protein sequenceShow/hide protein sequence
MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMTGPAPHTQLDAELAAGMGMP
DNGPKLMAM