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Spg012593 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012593
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArylphorin subunit beta
Genome locationscaffold1:9853898..9854727
RNA-Seq ExpressionSpg012593
SyntenySpg012593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604241.1 hypothetical protein SDJN03_04850, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4773.83Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ FI M+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL
        +SFG SK AV  SA+SAAK MEEAVDKVKENLVDKDKD+      HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL

XP_022950287.1 uncharacterized protein LOC111453420 [Cucurbita moschata]4.3e-4874.5Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ FILM+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL
        +SFG SK AV  SA+SAAK MEEAVDKVKENLVDKDKD+      HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL

XP_022977956.1 uncharacterized protein LOC111478091 [Cucurbita maxima]1.2e-4772.85Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ F+LM+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--------HDEL
        +SFG SK AV  SAKSAAK MEEAVDKVKENLVDKDK++        HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--------HDEL

XP_023544688.1 uncharacterized protein LOC111804199 [Cucurbita pepo subsp. pepo]1.1e-4876.19Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ FILM+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ----HDEL
        +SFG SK AV  SAKSAAK MEEAVDKVKENLVDKDKD+    HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ----HDEL

XP_038881383.1 uncharacterized protein LOC120072918 [Benincasa hispida]1.2e-5078.38Show/hide
Query:  EKAMEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKE
        EKAMEI NAK  SRL L+++ ILM+HVASCFA+  ++APERPSFGNFI ++VAIFKKSH +PWDK+KSL+HQMQLQFFPPNLDFRSR DE KGMVDE+KE
Subjt:  EKAMEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKE

Query:  AVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--HDEL
        AVE+SFG SK AVE SAKSAAK MEEAVDKVKENLVDKDKD+  HDEL
Subjt:  AVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--HDEL

TrEMBL top hitse value%identityAlignment
A0A1S3B154 uncharacterized protein LOC1034846924.0e-4470.55Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEIY+A++GSRL L+V+ ILM+HVASCFA+  +KAPERPSF NFI ++VAI KKSH +P DK++S++HQMQ QFFPPNLDFRS D+   G+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLV---DKDKDQHDEL
        +SF VSK AVE SAKSAAK MEEAVDKVKENLV   DK K++HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLV---DKDKDQHDEL

A0A5D3CLZ9 Uncharacterized protein4.0e-4470.55Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEIY+A++GSRL L+V+ ILM+HVASCFA+  +KAPERPSF NFI ++VAI KKSH +P DK++S++HQMQ QFFPPNLDFRS D+   G+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLV---DKDKDQHDEL
        +SF VSK AVE SAKSAAK MEEAVDKVKENLV   DK K++HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLV---DKDKDQHDEL

A0A6J1BUN4 uncharacterized protein LOC1110058701.3e-4270.2Show/hide
Query:  EKAMEIYNAKSGSRLQLVVVFILMVHVASCFAEE-PHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDE--TKGMVDE
        E AMEIY  K+G RL L++ FILM+HVAS FAEE  + APERPSFGNFI ++VA++KKSH + W KMKSL+HQMQLQFFPPNLDFRSRD+   + G+VDE
Subjt:  EKAMEIYNAKSGSRLQLVVVFILMVHVASCFAEE-PHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDE--TKGMVDE

Query:  MKEAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--HDEL
        MKEAVE+SF  SK AVE SAKSAA    EAV KVKENL DKDKDQ  HDEL
Subjt:  MKEAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--HDEL

A0A6J1GEE2 uncharacterized protein LOC1114534202.1e-4874.5Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ FILM+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL
        +SFG SK AV  SA+SAAK MEEAVDKVKENLVDKDKD+      HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ------HDEL

A0A6J1ILF3 uncharacterized protein LOC1114780916.0e-4872.85Show/hide
Query:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE
        MEI+N K+ SRL L++ F+LM+HVASCFA EP+KAPERPSFGNFI ++VAI KKSH SPWDK+K L+HQMQLQFFPPNLDFRS  DE KG+VDE+KEAVE
Subjt:  MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVE

Query:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--------HDEL
        +SFG SK AV  SAKSAAK MEEAVDKVKENLVDKDK++        HDEL
Subjt:  RSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQ--------HDEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16850.1 unknown protein1.6e-0840Show/hide
Query:  KKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENL
        K+S  + W K++  L + Q  FFPPN  F  ++D   G  + MKEA  RSF  SK  VE +A+SAA+ + +  + VKE +
Subjt:  KKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENL

AT5G64820.1 unknown protein1.1e-0931.34Show/hide
Query:  LVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDD----ETKGMVDEMKEAVERSFGVSKHA
        ++++ I  V      ++   K  E PS    I  S     K   S W+ ++  + ++Q++ +PPNLDFRS  D    E +   ++++EA  RS  VSK A
Subjt:  LVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDD----ETKGMVDEMKEAVERSFGVSKHA

Query:  VEGSAKSAAKAMEEAVDKVKENLVDKDKDQHDEL
        +E SAK A   + E V K  E +    +  HDE+
Subjt:  VEGSAKSAAKAMEEAVDKVKENLVDKDKDQHDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCCCTTTGGAAAAGGAAAAGGAAAAGGAAAAGGCGATGGAAATTTACAATGCAAAAAGTGGAAGCAGATTGCAGCTTGTTGTGGTGTTCATTTTGATGGTTCA
CGTTGCTTCATGTTTTGCAGAAGAACCCCACAAGGCTCCCGAGAGGCCCTCTTTTGGGAACTTCATTCACCAAAGTGTTGCCATTTTCAAGAAATCTCATCTCTCTCCTT
GGGACAAGATGAAAAGTCTCCTCCACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGATTTTAGGAGTAGAGATGATGAAACAAAAGGAATGGTTGATGAAATGAAA
GAAGCAGTGGAGAGGAGCTTTGGGGTAAGCAAGCATGCAGTTGAGGGATCTGCTAAATCTGCAGCAAAAGCCATGGAGGAGGCAGTGGACAAAGTCAAAGAGAACCTCGT
CGACAAGGACAAGGACCAACATGATGAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCCCTTTGGAAAAGGAAAAGGAAAAGGAAAAGGCGATGGAAATTTACAATGCAAAAAGTGGAAGCAGATTGCAGCTTGTTGTGGTGTTCATTTTGATGGTTCA
CGTTGCTTCATGTTTTGCAGAAGAACCCCACAAGGCTCCCGAGAGGCCCTCTTTTGGGAACTTCATTCACCAAAGTGTTGCCATTTTCAAGAAATCTCATCTCTCTCCTT
GGGACAAGATGAAAAGTCTCCTCCACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGATTTTAGGAGTAGAGATGATGAAACAAAAGGAATGGTTGATGAAATGAAA
GAAGCAGTGGAGAGGAGCTTTGGGGTAAGCAAGCATGCAGTTGAGGGATCTGCTAAATCTGCAGCAAAAGCCATGGAGGAGGCAGTGGACAAAGTCAAAGAGAACCTCGT
CGACAAGGACAAGGACCAACATGATGAGCTTTGA
Protein sequenceShow/hide protein sequence
MRFPLEKEKEKEKAMEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMK
EAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQHDEL