; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012672 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012672
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHigh mobility group B protein 6
Genome locationscaffold1:16599186..16600460
RNA-Seq ExpressionSpg012672
SyntenySpg012672
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025412.1 high mobility group B protein 6 [Cucumis melo var. makuwa]1.1e-8286.73Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL +P+D+PLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_004142680.1 high mobility group B protein 6 [Cucumis sativus]1.5e-8287.24Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL  P+DLPLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_008463266.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]1.6e-8186.22Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL +P+D+PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_022978293.1 high mobility group B protein 13-like [Cucurbita maxima]9.6e-8285.2Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQALH PLA P DLPLKSGRRPLQPKNSLPNPVPAVAK++KSKPERI+ISL  DANKEN PPIH+ A +   +ESCD SLADELNAVKRKLERLRL+ ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+ML+ERDM+ ELRMKELLQRS+ QRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_038883293.1 uncharacterized protein LOC120074285 [Benincasa hispida]1.3e-8689.85Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTAT-RIESCDSSLADELNAVKRKLERLRLDAE
        MQ LHHPLA PQDLPLKSGRRPLQPKNSLPN  P+VAK +KSKPERI+ISLSGDANKEN PPIH+TATT T  IESCDSSLADELNAVKRKLERLRLD E
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTAT-RIESCDSSLADELNAVKRKLERLRLDAE

Query:  RTEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RTE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDS+ FVTGF
Subjt:  RTEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

TrEMBL top hitse value%identityAlignment
A0A0A0L063 Uncharacterized protein7.2e-8387.24Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL  P+DLPLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A1S3CJ78 high mobility group B protein 68.0e-8286.22Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL +P+D+PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5A7SJQ2 High mobility group B protein 65.5e-8386.73Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL +P+D+PLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5D3CEI7 High mobility group B protein 68.0e-8286.22Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL +P+D+PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD+V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A6J1ISM0 high mobility group B protein 13-like4.7e-8285.2Show/hide
Query:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQALH PLA P DLPLKSGRRPLQPKNSLPNPVPAVAK++KSKPERI+ISL  DANKEN PPIH+ A +   +ESCD SLADELNAVKRKLERLRL+ ER
Subjt:  MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+ML+ERDM+ ELRMKELLQRS+ QRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDMVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein7.0e-2242.07Show/hide
Query:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDMVFELRMK
        SGR+ LQP+N    P      +     E+++ +L+ +                    S D+SLA+EL+A K+KLERLR D E TE++L+ERD   +L M 
Subjt:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDMVFELRMK

Query:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV
         LLQR + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++      F   E  D E SV
Subjt:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV

AT5G01910.2 unknown protein3.5e-2143.45Show/hide
Query:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDMVFELRMK
        SGR+ LQP+N    P      +     E+++ +L+ +                    S D+SLA+EL+A K+KLERLR D E TE++L+ERD   +L M 
Subjt:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDMVFELRMK

Query:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK
         LLQR + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++
Subjt:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCCCTTCACCATCCCTTAGCCGCGCCTCAAGATCTTCCTCTCAAGTCCGGCCGCCGCCCTCTCCAACCGAAGAATTCGTTGCCGAATCCCGTACCTGCCGTCGC
CAAAATCGTCAAATCCAAGCCGGAACGGATCGAGATCTCGCTCTCCGGCGACGCCAATAAGGAGAATCAACCGCCGATTCACTCGACGGCGACAACGGCGACTAGGATTG
AGTCGTGTGATTCGTCTCTGGCGGATGAACTCAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGCTGAACGAACGGAGGAGATGCTGAGAGAGAGGGATATG
GTGTTCGAGTTGCGGATGAAGGAGCTTTTGCAGAGAAGTCAGGTGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTAT
GAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAGGAGCGAGAAAAGATATTCACCGACGCACAATTTCCGGAATTTGAAATCGGCGACGGAGAAGAATCGGTTGGCGAAA
ATTCATCGTTGGATTCTTCAGAATTCGTCACAGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCCCTTCACCATCCCTTAGCCGCGCCTCAAGATCTTCCTCTCAAGTCCGGCCGCCGCCCTCTCCAACCGAAGAATTCGTTGCCGAATCCCGTACCTGCCGTCGC
CAAAATCGTCAAATCCAAGCCGGAACGGATCGAGATCTCGCTCTCCGGCGACGCCAATAAGGAGAATCAACCGCCGATTCACTCGACGGCGACAACGGCGACTAGGATTG
AGTCGTGTGATTCGTCTCTGGCGGATGAACTCAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGCTGAACGAACGGAGGAGATGCTGAGAGAGAGGGATATG
GTGTTCGAGTTGCGGATGAAGGAGCTTTTGCAGAGAAGTCAGGTGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTAT
GAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAGGAGCGAGAAAAGATATTCACCGACGCACAATTTCCGGAATTTGAAATCGGCGACGGAGAAGAATCGGTTGGCGAAA
ATTCATCGTTGGATTCTTCAGAATTCGTCACAGGTTTTTGA
Protein sequenceShow/hide protein sequence
MQALHHPLAAPQDLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDM
VFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF