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Spg012696 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012696
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglutaredoxin-C3
Genome locationscaffold1:5633805..5641979
RNA-Seq ExpressionSpg012696
SyntenySpg012696
Gene Ontology termsGO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004362 - glutathione-disulfide reductase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149976.1 glutaredoxin-C3 [Cucumis sativus]2.5e-1478.33Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLVLAVITL AL+PRD L GAEA+TSTSAFV NVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
XP_008440783.1 PREDICTED: glutaredoxin-C3 [Cucumis melo]2.2e-1580Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
XP_023003943.1 glutaredoxin-C3-like [Cucurbita maxima]2.7e-1376.67Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTL L VITL+AL PRDGL GAEASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
XP_023518077.1 glutaredoxin-C3 [Cucurbita pepo subsp. pepo]4.6e-1375Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTL L VITL+AL PRDGL GA+ASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
XP_038881412.1 glutaredoxin-C3 [Benincasa hispida]3.2e-1476.67Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLV+AVITL+ L PRDGL G EA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
TrEMBL top hitse value%identityAlignment
A0A0A0KKK8 Glutaredoxin domain-containing protein1.2e-1478.33Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLVLAVITL AL+PRD L GAEA+TSTSAFV NVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
A0A1S3B2P3 glutaredoxin-C31.1e-1580Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
A0A5A7SKA5 Glutaredoxin-C31.1e-1580Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTLV+AVITL AL+PRDGL GAEA+TSTSAFVHNVIYSNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
A0A6J1HE47 glutaredoxin-C35.0e-1375Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTL L VITL+AL PRDGL GA+ASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
A0A6J1KY27 glutaredoxin-C3-like1.3e-1376.67Show/hide
Query:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        LTL L VITL+AL PRDGL GAEASTSTSAFV NVI+SNRIAMFSKSYCP  +G   +FS
Subjt:  LTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77370.1 Glutaredoxin family protein1.4e-0453.66Show/hide
Query:  NGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS
        N A A+ S SAFV N I SN+I +FSKSYCP  +    +FS
Subjt:  NGAEASTSTSAFVHNVIYSNRIAMFSKSYCPTTVGFFALFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATAGGGGTACAAGTGGGGCGGAAGCGGTTGCAGTGCTAGAAGGACTCCGTCTGGCTCGGGAGTTGGATGTGCATCAATTAACGATTTTGTTGAATTCGTTGAC
TTTAATCAAAATTATTAACGAGGAAATCCAATGTCAGTCTTGCATTACTACAGTGATCTGGGATATTAGAGAAGTCAGAAAATCTTTTGAGATGTTGACTCTGGTTCTCG
CGGTGATCACCCTCACCGCCCTTTTTCCTAGAGATGGCCTTAACGGAGCCGAAGCTTCAACTTCCACTTCTGCTTTCGTTCACAACGTCATCTACTCTAACAGGATTGCC
ATGTTCTCCAAATCCTACTGCCCTACTACGGTTGGATTCTTTGCACTGTTTAGTCTCCCTGATTCTACGCTATTCTCTCATTCTTGGAGAGAGGTTTATGGAGATTGCCC
CATGTTAGCTCAAGGTTGCAATTTAATATTTCGAAGTACTGATTATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATAGGGGTACAAGTGGGGCGGAAGCGGTTGCAGTGCTAGAAGGACTCCGTCTGGCTCGGGAGTTGGATGTGCATCAATTAACGATTTTGTTGAATTCGTTGAC
TTTAATCAAAATTATTAACGAGGAAATCCAATGTCAGTCTTGCATTACTACAGTGATCTGGGATATTAGAGAAGTCAGAAAATCTTTTGAGATGTTGACTCTGGTTCTCG
CGGTGATCACCCTCACCGCCCTTTTTCCTAGAGATGGCCTTAACGGAGCCGAAGCTTCAACTTCCACTTCTGCTTTCGTTCACAACGTCATCTACTCTAACAGGATTGCC
ATGTTCTCCAAATCCTACTGCCCTACTACGGTTGGATTCTTTGCACTGTTTAGTCTCCCTGATTCTACGCTATTCTCTCATTCTTGGAGAGAGGTTTATGGAGATTGCCC
CATGTTAGCTCAAGGTTGCAATTTAATATTTCGAAGTACTGATTATGATTGA
Protein sequenceShow/hide protein sequence
MGDRGTSGAEAVAVLEGLRLARELDVHQLTILLNSLTLIKIINEEIQCQSCITTVIWDIREVRKSFEMLTLVLAVITLTALFPRDGLNGAEASTSTSAFVHNVIYSNRIA
MFSKSYCPTTVGFFALFSLPDSTLFSHSWREVYGDCPMLAQGCNLIFRSTDYD