CuGenDBv2

Gene ID	Spg012755
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ADP-ribosylation factor
Genome location	scaffold1:8456072..8456863
RNA-Seq Expression	Spg012755
Synteny	Spg012755
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR006689 - Small GTPase superfamily, ARF/SAR type IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

EOX91542.1 ADP-ribosylation factor A1F isoform 1 [Theobroma cacao]

2.3e-16

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI--VIEMV------------------LTLKQLSTKMLALQCGMLEAKTRYSL
        MGV ISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI   +E V                  LTLK L TKMLA   GMLE K  +++
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI--VIEMV------------------LTLKQLSTKMLALQCGMLEAKTRYSL

TYK12862.1 ADP-ribosylation factor 1 [Cucumis melo var. makuwa]

9.8e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

XP_004141900.1 ADP-ribosylation factor 1 [Cucumis sativus]

9.8e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

XP_008440320.1 PREDICTED: ADP-ribosylation factor 1-like isoform X2 [Cucumis melo]

9.8e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

XP_022133335.1 ADP-ribosylation factor 2-like [Momordica charantia]

9.8e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

TrEMBL top hits

e value

%identity

Alignment

A0A061DH91 ADP-ribosylation factor A1F isoform 1

1.1e-16

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI--VIEMV------------------LTLKQLSTKMLALQCGMLEAKTRYSL
        MGV ISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI   +E V                  LTLK L TKMLA   GMLE K  +++
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI--VIEMV------------------LTLKQLSTKMLALQCGMLEAKTRYSL

A0A0A0KID8 ADP-ribosylation factor, arf

4.7e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

A0A1S3B0T8 ADP-ribosylation factor 1-like isoform X2

4.7e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

A0A5D3CND0 ADP-ribosylation factor 1

4.7e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

A0A6J1BUS7 ADP-ribosylation factor 2-like

4.7e-15

100

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

SwissProt top hits

e value

%identity

Alignment

P0CM16 ADP-ribosylation factor

3.9e-14

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG+++S+L+  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

P0CM17 ADP-ribosylation factor

3.9e-14

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG+++S+L+  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

P36579 ADP-ribosylation factor 1

5.1e-14

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++IS+L + LF K+EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

P51822 ADP-ribosylation factor 1

8.6e-14

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

P51824 ADP-ribosylation factor 1

1.7e-14

87.76

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG+ IS+L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

Arabidopsis top hits

e value

%identity

Alignment

AT1G10630.1 ADP-ribosylation factor A1F

6.1e-15

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

AT1G23490.1 ADP-ribosylation factor 1

6.1e-15

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

AT1G70490.1 Ras-related small GTP-binding family protein

6.1e-15

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

AT1G70490.2 Ras-related small GTP-binding family protein

6.1e-15

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

AT1G70490.3 Ras-related small GTP-binding family protein

6.1e-15

83.67

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Query:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
        MG++ ++L   LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Subjt:  MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI

Sequences

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CDS sequence

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ATGGGAGTGGCCATATCTCGGCTTGTGAGGATGCTGTTTGCGAAGAAAGAAATGAGGATTTTAATGGTGGGTCTTGATGCTGCTGGAAAAACGACCATTCTGTATAAGTT
GAAGCTTGGAGAGATTGTCACCACCATACCCACCATCGTTATTGAGATGGTTTTAACGTTGAAACAGTTGAGTACAAAAATGTTAGCTTTACAGTGTGGGATGTTGGAGG
CCAAGACAAGGTACTCTCTTAGTTTGATCATTTCATGA

mRNA sequence

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Protein sequence

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MGVAISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVIEMVLTLKQLSTKMLALQCGMLEAKTRYSLSLIIS

Spg012755 (gene) of Sponge gourd (cylindrica) v1 genome