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Spg012770 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012770
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:21901270..21902566
RNA-Seq ExpressionSpg012770
SyntenySpg012770
Gene Ontology termsGO:0006101 - citrate metabolic process (biological process)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011736.1 Epimerase family protein SDR39U1-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0732.64Show/hide
Query:  CSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLS
        C+LFP LY+LS    L+ +A          SL  G   PL+DRE   ++SLLS L K  +H   R+   W P PS+G    S+F IL +       P  S
Subjt:  CSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLS

Query:  SLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRR--------NKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE
          S      +N E   R      GR  T+  C  +   FL R           E L+H++    FA   W+ F  TFGV  A+ R+   M+ E
Subjt:  SLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRR--------NKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE

KAG9449628.1 hypothetical protein H6P81_009593 [Aristolochia fimbriata]4.5e-0827.1Show/hide
Query:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCAS-PPSQGFPT
        +C+ +P+LY LS+E ++    +I+       + +L L R L D E T++A ++  L          D  IW P  S  FS SSY+++L  S    Q  P 
Subjt:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCAS-PPSQGFPT

Query:  LSSLSPSSPPR--------RNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNS
         +S+   +P +          ++I        RG+    + C       L  ++ ET NHLL  C FA ++W+   + FG+     +D   ++++  +  
Subjt:  LSSLSPSSPPR--------RNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNS

Query:  PFRDKGKILWPAQL
        P R  G ILW A +
Subjt:  PFRDKGKILWPAQL

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]4.6e-2136.95Show/hide
Query:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTL
        +C LFP LY+LS  K+ H +A  L     S S S G  R L+DRE + + +L+S+L      LGRRD  +W P P EGF C S+FQ L  S P+    ++
Subjt:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTL

Query:  SSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKIL
        SSL                  + R + P       RK        EE L+HLL  C   S +W+ F +TFG+  A+ RD    +EE  LNSP  ++G  L
Subjt:  SSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKIL

Query:  WPA
        W A
Subjt:  WPA

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]4.9e-1537.69Show/hide
Query:  FPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLS
        FP++Y LS EK L S+A +L   +  SS+SLGLSR LTD E  ++A+LL +L       GR D R+WIP P  GFSCSS+FQ+L  SP S  F  L+SLS
Subjt:  FPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLS

Query:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKILWPA
         SS P     +TP   S+ + + P       +K+KF                             FG    QG D G ++       PFR++G+ LW A
Subjt:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKILWPA

XP_022968893.1 epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita maxima]1.4e-0631.52Show/hide
Query:  SSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLSPSSPPRRNYEITPRTPSVSRGRGPT
        ++SL  G   PL+DRE   ++SLLS L    +H G R+   W P PS+G  C S+F IL +   S+    +  L          +I   T     GR  T
Subjt:  SSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLSPSSPPRRNYEITPRTPSVSRGRGPT

Query:  IEPCSIRKLKFL--------RRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE
        +  C  +   FL             E L+H++    FA   W+ F  TFGV  A+ RD   M+ E
Subjt:  IEPCSIRKLKFL--------RRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE

TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK12.2e-2136.95Show/hide
Query:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTL
        +C LFP LY+LS  K+ H +A  L     S S S G  R L+DRE + + +L+S+L      LGRRD  +W P P EGF C S+FQ L  S P+    ++
Subjt:  MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTL

Query:  SSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKIL
        SSL                  + R + P       RK        EE L+HLL  C   S +W+ F +TFG+  A+ RD    +EE  LNSP  ++G  L
Subjt:  SSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKIL

Query:  WPA
        W A
Subjt:  WPA

A0A6J1DFI2 uncharacterized protein LOC1110196242.4e-1537.69Show/hide
Query:  FPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLS
        FP++Y LS EK L S+A +L   +  SS+SLGLSR LTD E  ++A+LL +L       GR D R+WIP P  GFSCSS+FQ+L  SP S  F  L+SLS
Subjt:  FPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLS

Query:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKILWPA
         SS P     +TP   S+ + + P       +K+KF                             FG    QG D G ++       PFR++G+ LW A
Subjt:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKILWPA

A0A6J1HZE6 epimerase family protein SDR39U1 homolog, chloroplastic-like6.9e-0731.52Show/hide
Query:  SSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLSPSSPPRRNYEITPRTPSVSRGRGPT
        ++SL  G   PL+DRE   ++SLLS L    +H G R+   W P PS+G  C S+F IL +   S+    +  L          +I   T     GR  T
Subjt:  SSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLSPSSPPRRNYEITPRTPSVSRGRGPT

Query:  IEPCSIRKLKFL--------RRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE
        +  C  +   FL             E L+H++    FA   W+ F  TFGV  A+ RD   M+ E
Subjt:  IEPCSIRKLKFL--------RRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEE

A0A6N2KHV9 Uncharacterized protein ycf681.2e-0693.55Show/hide
Query:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSI
        PSSPPRRNYEI PRTPS SRGRGPTIEPCSI
Subjt:  PSSPPRRNYEITPRTPSVSRGRGPTIEPCSI

A0A7J6HLS5 Citrate synthase9.1e-0783.33Show/hide
Query:  LSSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSI
        +  L+PSSPPRRNYEITPRT S SRGRGPTIEPCSI
Subjt:  LSSLSPSSPPRRNYEITPRTPSVSRGRGPTIEPCSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCCCTTTTTCCTCAGCTTTATAACCTGTCTGATGAGAAGTCGTTGCACTCGATAGCCTCTATTTTGCCCTCCCCTGACCCCTCCTCATCCCTTTCCTTGGGCCT
TAGCCGTCCCCTTACCGATCGTGAGATGACCCAACTTGCTAGTCTACTTTCCATTCTTTCTAAGCGGATCATCCATCTTGGGAGGAGGGACTCGCGTATCTGGATTCCTA
AACCCTCTGAAGGCTTTTCTTGTAGCTCTTATTTCCAAATCTTATGTGCTTCCCCCCCTTCCCAGGGTTTCCCTACTTTATCTTCTCTCTCCCCATCGTCTCCACCCCGT
AGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGAAAGTTAAAATTCCTAAGAAGGAATAAGGAGGA
GACTTTAAACCATTTGCTTGAAGATTGCTTGTTCGCATCCTCTCTTTGGAATCGTTTCTATAGGACTTTTGGAGTGGTCTCGGCTCAAGGTAGGGATTGTGGGTTCATGA
TCGAGGAAGTTTTCCTTAACTCTCCTTTTCGTGATAAAGGAAAGATTTTATGGCCGGCACAACTTTTCTTTGCCACTTTCCACTGCAAATCCGCAACCCCCGAACACCCA
GATCCAATGAGCTGCGACGAACCCATGCAGCCGTCGGTTGAACATAGCCCGCACGCCGCCACACAGCCTCCTACAGCAGCAACATCCGTTGGTGATTTAGCTCCTTTTCC
AGTCGGTATCCGAACCAGACCCAATGTCGCGCGACCAAATTTGGACACCCACGACTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTCCCTTTTTCCTCAGCTTTATAACCTGTCTGATGAGAAGTCGTTGCACTCGATAGCCTCTATTTTGCCCTCCCCTGACCCCTCCTCATCCCTTTCCTTGGGCCT
TAGCCGTCCCCTTACCGATCGTGAGATGACCCAACTTGCTAGTCTACTTTCCATTCTTTCTAAGCGGATCATCCATCTTGGGAGGAGGGACTCGCGTATCTGGATTCCTA
AACCCTCTGAAGGCTTTTCTTGTAGCTCTTATTTCCAAATCTTATGTGCTTCCCCCCCTTCCCAGGGTTTCCCTACTTTATCTTCTCTCTCCCCATCGTCTCCACCCCGT
AGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGAAAGTTAAAATTCCTAAGAAGGAATAAGGAGGA
GACTTTAAACCATTTGCTTGAAGATTGCTTGTTCGCATCCTCTCTTTGGAATCGTTTCTATAGGACTTTTGGAGTGGTCTCGGCTCAAGGTAGGGATTGTGGGTTCATGA
TCGAGGAAGTTTTCCTTAACTCTCCTTTTCGTGATAAAGGAAAGATTTTATGGCCGGCACAACTTTTCTTTGCCACTTTCCACTGCAAATCCGCAACCCCCGAACACCCA
GATCCAATGAGCTGCGACGAACCCATGCAGCCGTCGGTTGAACATAGCCCGCACGCCGCCACACAGCCTCCTACAGCAGCAACATCCGTTGGTGATTTAGCTCCTTTTCC
AGTCGGTATCCGAACCAGACCCAATGTCGCGCGACCAAATTTGGACACCCACGACTTGTAG
Protein sequenceShow/hide protein sequence
MCSLFPQLYNLSDEKSLHSIASILPSPDPSSSLSLGLSRPLTDREMTQLASLLSILSKRIIHLGRRDSRIWIPKPSEGFSCSSYFQILCASPPSQGFPTLSSLSPSSPPR
RNYEITPRTPSVSRGRGPTIEPCSIRKLKFLRRNKEETLNHLLEDCLFASSLWNRFYRTFGVVSAQGRDCGFMIEEVFLNSPFRDKGKILWPAQLFFATFHCKSATPEHP
DPMSCDEPMQPSVEHSPHAATQPPTAATSVGDLAPFPVGIRTRPNVARPNLDTHDL