CuGenDBv2

Gene ID	Spg012855
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	TPR_REGION domain-containing protein
Genome location	scaffold1:7163844..7164461
RNA-Seq Expression	Spg012855
Synteny	Spg012855
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001440 - Tetratricopeptide repeat 1 IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604067.1 hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-91

91.22

Show/hide

Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH S
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

XP_022132455.1 uncharacterized protein LOC111005306 [Momordica charantia]

1.0e-89

89.27

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAAT+  VRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARS SQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDHMGHQS
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLS +EL KAL+KRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES PAREG
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L+RLN
Subjt:  LDRLN

XP_022950520.1 uncharacterized protein LOC111453603 [Cucurbita moschata]

1.8e-91

91.22

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH S
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

XP_022978825.1 uncharacterized protein LOC111478668 [Cucurbita maxima]

4.1e-91

90.24

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        +IQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSISQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+HMGH S
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLD+ALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

XP_023543662.1 uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]

1.1e-91

91.22

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGHQS
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEAR+AFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

TrEMBL top hits

e value

%identity

Alignment

A0A5E4EZ55 PREDICTED

1.1e-60

63.29

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        ++Q+ L ILT A  F + ++S++A  K+R  NRA LQS+RHF +G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALALD +GH++
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPA
        SALKS DVALSPPC+KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AV L    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P S  A
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPA

Query:  REGLDRL
        R+GLDRL
Subjt:  REGLDRL

A0A6J1BSI1 uncharacterized protein LOC111005306

4.9e-90

89.27

Show/hide

Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAAT+  VRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARS SQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDHMGHQS
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLS +EL KAL+KRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES PAREG
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L+RLN
Subjt:  LDRLN

A0A6J1GFZ7 uncharacterized protein LOC111453603

8.9e-92

91.22

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        MIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH S
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLDVALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

A0A6J1IRB2 uncharacterized protein LOC111478668

2.0e-91

90.24

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Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        +IQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSISQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+HMGH S
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG
        SALKSLD+ALSPPCLKSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+MKDEARQAFEKALTVDPES PARE 
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREG

Query:  LDRLN
        L RLN
Subjt:  LDRLN

A0A6J5V4N0 TPR_REGION domain-containing protein

2.8e-61

63.77

Show/hide

Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        ++Q+ L ILT A  F + ++S++A  K+R  NRA LQS+RHF +G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALALD +GH++
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPA
        SALKS DVALSPPC+KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AVSL    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P S  A
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPA

Query:  REGLDRL
        R+GLDRL
Subjt:  REGLDRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

6.8e-44

51.53

Show/hide

Query:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS
        +IQ A+ +LT    + ++ LS+R   K R K+RA LQ+ R   + + LLARAR+  ++SQS   AK AL EA+  +++SP D A HI++ALALD +GH +
Subjt:  MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQS

Query:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVG--DDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPES
        SALKS D+AL+ P LKSLS  E A AL+KRAE+K+AVNR+RR+DSAVEDL EAV L    D ++ F LLG+CYE+K +K++A+ AF +AL   P S
Subjt:  SALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVG--DDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPES

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATACAAGTAGCTCTGTTCATCCTCACAGCAGCAACGATGTTCACCGTACGAGAACTTTCCAAACGAGCATTCGGCAAGGTCCGCCATAAGAATCGCGCGATCCTCCA
ATCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAATTTCTCAACAATCTCAATCGATCGACTACGCGAAGAAGGCACTAATCGAAGCCGAAA
CGGCGCTTTCCCTTTCCCCAAGAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCACCAGAGCTCCGCTCTTAAATCACTAGACGTTGCACTT
TCTCCGCCGTGCTTGAAGTCACTATCAGAGAAAGAGCTCGCAAAGGCGTTGATGAAGAGAGCCGAATTGAAGATTGCCGTCAACCGGAAACGGCGACTCGACTCGGCGGT
GGAAGACTTGTTAGAGGCGGTGAGTTTGGTCGGAGATGACTCGAAGGCCTTCTGTTTGTTGGGTCAATGTTACGAGTGGAAGGAAATGAAAGATGAGGCCCGGCAGGCTT
TCGAGAAGGCTCTAACCGTGGATCCTGAATCAGGCCCGGCCCGCGAGGGATTGGACCGGTTGAATTGA

mRNA sequence

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Protein sequence

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MIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVAL
SPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREGLDRLN

Spg012855 (gene) of Sponge gourd (cylindrica) v1 genome