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Spg012858 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012858
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhomeobox-leucine zipper protein ATHB-6-like
Genome locationscaffold1:5126957..5127469
RNA-Seq ExpressionSpg012858
SyntenySpg012858
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031308.1 Homeobox-leucine zipper protein ATHB-6 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4975.68Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN
        P I DQFSVP A+ESQDFNY S +NNGGEG     EE SLF DFKDGSSD DSSAILNEDY PT AI SP VLQ H+H HFMT A+   SPSPS  VKLN
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN

Query:  CVTTTLSYLQYQKGYR-QTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
        C TT L+YLQYQKGY+ QTQMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  CVTTTLSYLQYQKGYR-QTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

XP_022136962.1 homeobox-leucine zipper protein ATHB-6-like [Momordica charantia]5.8e-5177.46Show/hide
Query:  FSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTTTL
        FSVPPA+E +D NYESFNNNGGEGEE PTEEASLF DFKDGSSD DSSAILNEDYS TAAI SPGVLQN  H+HFM A   SPSPSPSAAVK NC T  L
Subjt:  FSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTTTL

Query:  SYLQYQKGYRQTQMFPKMEEHNFFNGEE-ACNFFSDEQAPTL
        +Y Q+QK Y+QTQ++PKMEEHNFF GEE  CNFFS+EQAP+L
Subjt:  SYLQYQKGYRQTQMFPKMEEHNFFNGEE-ACNFFSDEQAPTL

XP_022999792.1 homeobox-leucine zipper protein ATHB-6-like [Cucurbita maxima]3.2e-4975.68Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN
        P I DQFSVP A+ESQDFNYES +NNGGEG     EE SLF DFKDGSSD DSSAILNEDY PT AI S  VLQ H+H HFMT A+   SPSPS  VKLN
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN

Query:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
        C TT L+YLQYQKGY +QTQMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

XP_023547219.1 homeobox-leucine zipper protein ATHB-6-like [Cucurbita pepo subsp. pepo]3.2e-4975Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN
        P I DQFSVP A+E+QDFNYES ++NGGEG     EE SLF DFKDGSSD DSSAILNEDY PT AI SP VLQ H+H HFMT A+   SPSPS  VKLN
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN

Query:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
        C TT L+YLQYQKGY +QTQMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

XP_038905018.1 homeobox-leucine zipper protein ATHB-6-like [Benincasa hispida]1.4e-5279.86Show/hide
Query:  DQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTT
        DQFSVPPASESQDFNYESFN+NGGEGEEAP EEA+LF DFKDGSSD DSSAILNEDYSPTA I SPGVLQNH  +H MT A    SP PSAAVKLN    
Subjt:  DQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTT

Query:  TLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
           YLQ+QKGY +QTQMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  TLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

TrEMBL top hitse value%identityAlignment
A0A6J1C6W4 homeobox-leucine zipper protein ATHB-6-like2.8e-5177.46Show/hide
Query:  FSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTTTL
        FSVPPA+E +D NYESFNNNGGEGEE PTEEASLF DFKDGSSD DSSAILNEDYS TAAI SPGVLQN  H+HFM A   SPSPSPSAAVK NC T  L
Subjt:  FSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLNCVTTTL

Query:  SYLQYQKGYRQTQMFPKMEEHNFFNGEE-ACNFFSDEQAPTL
        +Y Q+QK Y+QTQ++PKMEEHNFF GEE  CNFFS+EQAP+L
Subjt:  SYLQYQKGYRQTQMFPKMEEHNFFNGEE-ACNFFSDEQAPTL

A0A6J1ENE6 homeobox-leucine zipper protein ATHB-6-like2.0e-4168.46Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPS-PSAAVKL
        P I D FSVPPA         SFNNNGGEG+E PT         KDGSSD DSSAILNEDYSPTA + SPGVLQN  ++HFMT A P  SPS  +A VKL
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPS-PSAAVKL

Query:  NCVTTTLSYLQYQKGYRQTQ-MFPKMEEHNFFNGEEACNFFSDEQAPTL
        N  TT L+YLQ+QKGY+QTQ MFPKMEEHNFF GEEACNFFSDEQAPTL
Subjt:  NCVTTTLSYLQYQKGYRQTQ-MFPKMEEHNFFNGEEACNFFSDEQAPTL

A0A6J1FNC9 homeobox-leucine zipper protein ATHB-6-like2.6e-4975Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN
        P I DQFSVP A+ESQDFNY S +NNGGEG     EE SLF DFKDGSSD DSSAILNEDY PT AI SP VLQ H+H HFMT A+   SPSPS  VKLN
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN

Query:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
        C TT L+YLQYQKGY +Q+QMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

A0A6J1JAW1 homeobox-leucine zipper protein ATHB-6-like3.1e-4268.46Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPS-PSAAVKL
        P I D FSVPPA         SFNNNGGEG+E PT         KDGSSD DSSAILNEDYSPTA + SPGVLQN  ++HFMT   P  SPS  +A VKL
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPS-PSAAVKL

Query:  NCVTTTLSYLQYQKGYRQTQ-MFPKMEEHNFFNGEEACNFFSDEQAPTL
        NC TT L+YLQ+QKGY+QTQ MFPKMEEHNFF GEEACNFFSDEQAPTL
Subjt:  NCVTTTLSYLQYQKGYRQTQ-MFPKMEEHNFFNGEEACNFFSDEQAPTL

A0A6J1KBS4 homeobox-leucine zipper protein ATHB-6-like1.6e-4975.68Show/hide
Query:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN
        P I DQFSVP A+ESQDFNYES +NNGGEG     EE SLF DFKDGSSD DSSAILNEDY PT AI S  VLQ H+H HFMT A+   SPSPS  VKLN
Subjt:  PGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSPSAAVKLN

Query:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL
        C TT L+YLQYQKGY +QTQMFPKMEEHNFF+GEE CNFFSDEQAPTL
Subjt:  CVTTTLSYLQYQKGY-RQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCTCCATCAGGACAATCAACCTCTCCTCAAAGAGGTACAATGGCGGGAATTGCCGGGAATTGCCGGGAATTGTCGATCAGTTCTCTGTTCCTCCGGCGAGTGA
ATCCCAAGACTTCAATTACGAGAGCTTCAACAACAATGGCGGAGAAGGGGAAGAGGCGCCGACGGAAGAGGCGTCATTGTTCCGCGATTTCAAAGATGGGTCATCCGATT
ACGATTCGAGCGCAATTTTGAACGAAGATTACAGCCCCACGGCGGCCATTTATTCACCAGGGGTGCTGCAGAACCACCACCATCACCACTTCATGACGGCGGCATCTCCG
TCTCCGTCTCCGTCTCCGTCCGCCGCCGTGAAACTGAACTGCGTAACGACGACGCTGAGTTACTTGCAGTATCAGAAGGGGTATCGACAAACCCAGATGTTTCCGAAAAT
GGAGGAGCATAATTTCTTCAACGGAGAGGAGGCTTGTAACTTCTTCTCCGATGAGCAAGCTCCGACTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCTCCATCAGGACAATCAACCTCTCCTCAAAGAGGTACAATGGCGGGAATTGCCGGGAATTGCCGGGAATTGTCGATCAGTTCTCTGTTCCTCCGGCGAGTGA
ATCCCAAGACTTCAATTACGAGAGCTTCAACAACAATGGCGGAGAAGGGGAAGAGGCGCCGACGGAAGAGGCGTCATTGTTCCGCGATTTCAAAGATGGGTCATCCGATT
ACGATTCGAGCGCAATTTTGAACGAAGATTACAGCCCCACGGCGGCCATTTATTCACCAGGGGTGCTGCAGAACCACCACCATCACCACTTCATGACGGCGGCATCTCCG
TCTCCGTCTCCGTCTCCGTCCGCCGCCGTGAAACTGAACTGCGTAACGACGACGCTGAGTTACTTGCAGTATCAGAAGGGGTATCGACAAACCCAGATGTTTCCGAAAAT
GGAGGAGCATAATTTCTTCAACGGAGAGGAGGCTTGTAACTTCTTCTCCGATGAGCAAGCTCCGACTCTGTAG
Protein sequenceShow/hide protein sequence
MKLSIRTINLSSKRYNGGNCRELPGIVDQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDYDSSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASP
SPSPSPSAAVKLNCVTTTLSYLQYQKGYRQTQMFPKMEEHNFFNGEEACNFFSDEQAPTL