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Spg012870 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012870
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:8363340..8363600
RNA-Seq ExpressionSpg012870
SyntenySpg012870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]1.9e-1057.47Show/hide
Query:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRISGSALA----DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH
        SS LL++ LIAA RF L VDCRPLR GS  +RH +  +A A      PET  AA+ P DSG     D  GGV FT+ASGPSRKGAGH
Subjt:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRISGSALA----DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH

KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1871.91Show/hide
Query:  MAKITPSSLLLVMLLIAATRFVLLVDCRPLRSGST-ERHRI-SGSALADKPET-AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH
        MA +  SSLLL++ LIAAT FVLLVD RPLRSGST + H I +GSALA+KPET AASP SDS I +S  G GGVVFTL SGPSRKGAGH
Subjt:  MAKITPSSLLLVMLLIAATRFVLLVDCRPLRSGST-ERHRI-SGSALADKPET-AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH

KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1564.37Show/hide
Query:  MAKITPSSLLLVMLLIAATRFVLLVDCRPLRSGST-ERHRISGSALADKPETAASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH
        M K+  SSLLL+M+L+AATRF+ LVDCRPLRSGST E  R +  +     E AAS P DSG R S  G GGV FTLASGPSRKGAGH
Subjt:  MAKITPSSLLLVMLLIAATRFVLLVDCRPLRSGST-ERHRISGSALADKPETAASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH

TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]6.7e-1161.18Show/hide
Query:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRI-SGSALA-DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH
        SS LL++LL+AA RF L VDCRPLR GS  +RH + + SA+  D PET  AA+   DSG RR  D  GGV FT+ASGPSRKGAGH
Subjt:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRI-SGSALA-DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH

TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein3.2e-1161.18Show/hide
Query:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRI-SGSALA-DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH
        SS LL++LL+AA RF L VDCRPLR GS  +RH + + SA+  D PET  AA+   DSG RR  D  GGV FT+ASGPSRKGAGH
Subjt:  SSLLLVMLLIAATRFVLLVDCRPLRSGS-TERHRI-SGSALA-DKPET--AASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGATAACACCCTCCTCTCTACTTCTAGTCATGCTGCTAATCGCCGCCACACGGTTCGTTCTTCTCGTAGACTGTAGACCGCTCCGATCCGGTTCAACAGAGCG
TCACCGTATTAGCGGCTCTGCTCTTGCCGATAAGCCGGAAACAGCCGCATCGCCACCGAGCGATTCCGGTATCCGCCGGAGCGAAGACGGCAGCGGTGGCGTTGTGTTTA
CGTTGGCTTCGGGACCTAGCAGGAAGGGTGCTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGATAACACCCTCCTCTCTACTTCTAGTCATGCTGCTAATCGCCGCCACACGGTTCGTTCTTCTCGTAGACTGTAGACCGCTCCGATCCGGTTCAACAGAGCG
TCACCGTATTAGCGGCTCTGCTCTTGCCGATAAGCCGGAAACAGCCGCATCGCCACCGAGCGATTCCGGTATCCGCCGGAGCGAAGACGGCAGCGGTGGCGTTGTGTTTA
CGTTGGCTTCGGGACCTAGCAGGAAGGGTGCTGGCCATTAA
Protein sequenceShow/hide protein sequence
MAKITPSSLLLVMLLIAATRFVLLVDCRPLRSGSTERHRISGSALADKPETAASPPSDSGIRRSEDGSGGVVFTLASGPSRKGAGH