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Spg012899 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012899
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold1:11105003..11110013
RNA-Seq ExpressionSpg012899
SyntenySpg012899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.0e-1933.04Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQEDIPVQSYI-PV-----
        D+  +Y++WY+NI++ +IT+ GA+    +LN+CN  +  ME +HYMY++PI P P  RRR       +++E D   +E  P+ +     +Y+ PV     
Subjt:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQEDIPVQSYI-PV-----

Query:  -----YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE---------------------E
             Y+    Q     + +    AG S+        ++D  + PSSS  HG GRG GEH +Y+Y   P  + E+  E                     +
Subjt:  -----YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE---------------------E

Query:  EDPNDQVPRARRRQPARNRRRPPCGTH
        E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  EDPNDQVPRARRRQPARNRRRPPCGTH

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]2.1e-3952.23Show/hide
Query:  MEDKCLGFVLHTNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALP
        M DK LGF+L  NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+D+R + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P
Subjt:  MEDKCLGFVLHTNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALP

Query:  VPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDANGD
        + N+VHLYVNV R+  ++    +   Q  + +Q I P+ E VA        + AN D
Subjt:  VPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDANGD

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-1832.31Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYG--------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQS
        D+  +Y+ WY NITR +ITR GA+ G              Q  L++CN+ +  ME++H MY++PI PP  P  R   RV+E ++                
Subjt:  DMAPDYMDWYENITRRFITREGASYG--------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQS

Query:  YIPVYEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGCGEHAQYVY---------PIELVEEPR
           VY +V   P     +       P T + T    + D+E G                  PS+S  HG  RG GEH +Y+Y           E  +EP 
Subjt:  YIPVYEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGCGEHAQYVY---------PIELVEEPR

Query:  EEEDPNDQVPRARRRQPARNRRRPPCGTH
         +ED      ++RRRQP RNRRRP CGTH
Subjt:  EEEDPNDQVPRARRRQPARNRRRPPCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.2e-1652.58Show/hide
Query:  MIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALPVPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPP
        M+GLSLGVD+  +Q++I+YRHP ++  G+VRFMP  I N Q MN MFSIALP PN+VHLYV V  + D   N    P       + +D EPES APP
Subjt:  MIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALPVPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPP

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.7e-1531.28Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE
        D+  +Y+ WY+NI++ +IT+ GA+                  Q +LN+CN  +  ME +HYMY++PI P P  RRR       +++E D   +E  P+ +
Subjt:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE

Query:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE-EEDPN
             +Y+ PV          Y+    Q     + +    AG S+        ++D  + PSSS  HG GRG G+H +Y+Y   P  + E+  E ++  N
Subjt:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE-EEDPN

Query:  DQVP--------------------RARRRQPARNRRRPPCGTH
          VP                    ++RRRQPARNRRRP CGTH
Subjt:  DQVP--------------------RARRRQPARNRRRPPCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.2e-1634.88Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQSYIPVYEDVPVQPHI
        D+  +Y++WY+NITR +I + GA     +LN+CN  +  +E +HYMY++PI   P  RRR  + VQE D   + D   +E  PV       +   V P +
Subjt:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQSYIPVYEDVPVQPHI

Query:  IVQ----EHIPDGAGPSTPVMTIPPSWHDYEAGPSSSS----------------AHGRGRGCGEHAQYVY------PIELVEEPREEEDPND-QVPRARR
        ++Q     +   G G S+   T    +++ EAGPSSS+                 H  GRG GEH +Y+Y       +E ++E +++E+  + Q  R + 
Subjt:  IVQ----EHIPDGAGPSTPVMTIPPSWHDYEAGPSSSS----------------AHGRGRGCGEHAQYVY------PIELVEEPREEEDPND-QVPRARR

Query:  RQPARNRRRPPCGTH
        RQP RNRRRP CGTH
Subjt:  RQPARNRRRPPCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein3.4e-1933.04Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQEDIPVQSYI-PV-----
        D+  +Y++WY+NI++ +IT+ GA+    +LN+CN  +  ME +HYMY++PI P P  RRR       +++E D   +E  P+ +     +Y+ PV     
Subjt:  DMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQEDIPVQSYI-PV-----

Query:  -----YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE---------------------E
             Y+    Q     + +    AG S+        ++D  + PSSS  HG GRG GEH +Y+Y   P  + E+  E                     +
Subjt:  -----YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE---------------------E

Query:  EDPNDQVPRARRRQPARNRRRPPCGTH
        E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  EDPNDQVPRARRRQPARNRRRPPCGTH

A0A5A7THR5 Uncharacterized protein1.0e-3952.23Show/hide
Query:  MEDKCLGFVLHTNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALP
        M DK LGF+L  NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+D+R + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P
Subjt:  MEDKCLGFVLHTNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALP

Query:  VPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDANGD
        + N+VHLYVNV R+  ++    +   Q  + +Q I P+ E VA        + AN D
Subjt:  VPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDANGD

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-1832.31Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYG--------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQS
        D+  +Y+ WY NITR +ITR GA+ G              Q  L++CN+ +  ME++H MY++PI PP  P  R   RV+E ++                
Subjt:  DMAPDYMDWYENITRRFITREGASYG--------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQS

Query:  YIPVYEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGCGEHAQYVY---------PIELVEEPR
           VY +V   P     +       P T + T    + D+E G                  PS+S  HG  RG GEH +Y+Y           E  +EP 
Subjt:  YIPVYEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAG------------------PSSSSAHGRGRGCGEHAQYVY---------PIELVEEPR

Query:  EEEDPNDQVPRARRRQPARNRRRPPCGTH
         +ED      ++RRRQP RNRRRP CGTH
Subjt:  EEEDPNDQVPRARRRQPARNRRRPPCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.6e-1652.58Show/hide
Query:  MIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALPVPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPP
        M+GLSLGVD+  +Q++I+YRHP ++  G+VRFMP  I N Q MN MFSIALP PN+VHLYV V  + D   N    P       + +D EPES APP
Subjt:  MIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALPVPNVVHLYVNVRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPP

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-1531.28Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE
        D+  +Y+ WY+NI++ +IT+ GA+                  Q +LN+CN  +  ME +HYMY++PI P P  RRR       +++E D   +E  P+ +
Subjt:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE

Query:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE-EEDPN
             +Y+ PV          Y+    Q     + +    AG S+        ++D  + PSSS  HG GRG G+H +Y+Y   P  + E+  E ++  N
Subjt:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE-EEDPN

Query:  DQVP--------------------RARRRQPARNRRRPPCGTH
          VP                    ++RRRQPARNRRRP CGTH
Subjt:  DQVP--------------------RARRRQPARNRRRPPCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.1e-1631.28Show/hide
Query:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE
        D+  +Y++WY+NI++ +IT+ GA                   Q +LN+CN  +  ME +HYMY++PI P P  RRR       +++E D   +E  P+ +
Subjt:  DMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRR----RGARVQEEDVPVQEDIPVQE

Query:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE------
             +Y+ PV          Y+    Q     + +    AG S+        ++D  + PSSS  HG GRG GEH +Y+Y   P  + E+  E      
Subjt:  DIPVQSYI-PV----------YEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVY---PIELVEEPRE------

Query:  ---------------EEDPNDQVPRARRRQPARNRRRPPCGTH
                       +E+   Q  ++RRRQPARNRRRP CGTH
Subjt:  ---------------EEDPNDQVPRARRRQPARNRRRPPCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATACGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGC
TCGTAGTGGGGTTGTCTTTGAACAATTCATTGAAATGATAGGATTATCGCTGGGTGTAGATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTGGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGAATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGTACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCTGAGCCTGAATCAGTAGCACCACCATGTGA
TGCAAGTTCTCCAATAGATGCTAATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAG
CGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGGACCTAGGCGTAGAAGAGGTGCTCGT
GTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCGGTACAGGAGGATATTCCAGTACAGTCTTATATTCCAGTGTATGAGGATGTTCCAGTACAGCCTCATATTAT
AGTACAGGAGCATATTCCAGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGAC
GTGGACGTGGATGTGGAGAGCATGCACAATATGTATACCCTATAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAAATGATCAGGTACCGAGGGCTCGTCGTCGA
CAACCAGCTCGTAATCGACGACGTCCGCCTTGTGGCACACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATAAATGTTTGGGATTTGTTTTGCATACGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGC
TCGTAGTGGGGTTGTCTTTGAACAATTCATTGAAATGATAGGATTATCGCTGGGTGTAGATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCAC
CATTGGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGAATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAAT
GTCAGAAGAATAGAAGATAATGTACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCTGAGCCTGAATCAGTAGCACCACCATGTGA
TGCAAGTTCTCCAATAGATGCTAATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAG
CGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGGACCTAGGCGTAGAAGAGGTGCTCGT
GTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCGGTACAGGAGGATATTCCAGTACAGTCTTATATTCCAGTGTATGAGGATGTTCCAGTACAGCCTCATATTAT
AGTACAGGAGCATATTCCAGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGAC
GTGGACGTGGATGTGGAGAGCATGCACAATATGTATACCCTATAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAAATGATCAGGTACCGAGGGCTCGTCGTCGA
CAACCAGCTCGTAATCGACGACGTCCGCCTTGTGGCACACATTAG
Protein sequenceShow/hide protein sequence
MEDKCLGFVLHTNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVDVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMNLMFSIALPVPNVVHLYVN
VRRIEDNVQNFGEIPSQCFEPSQCIDPEPESVAPPCDASSPIDANGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAR
VQEEDVPVQEDIPVQEDIPVQSYIPVYEDVPVQPHIIVQEHIPDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGCGEHAQYVYPIELVEEPREEEDPNDQVPRARRR
QPARNRRRPPCGTH