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Spg012913 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012913
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme E2 S
Genome locationscaffold1:18526378..18529432
RNA-Seq ExpressionSpg012913
SyntenySpg012913
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7819192.1 Ubiquitin-conjugating enzyme E2 22 [Senna tora]1.9e-1796Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGM
        ATNENLPPNVIKQLAKELK+LDESPPEGIKV VNDDDFSTIYADIEGPGM
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGM

KAG7027455.1 Ubiquitin-conjugating enzyme E2 22, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2189.23Show/hide
Query:  LDKILITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSSITHS
        LD IL    ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMS IT S
Subjt:  LDKILITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSSITHS

PPD84210.1 hypothetical protein GOBAR_DD18861 [Gossypium barbadense]1.9e-1785.71Show/hide
Query:  KILITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPG
        K   ++ ATNENLPPNVIKQLAKELK LDESPPEGIKVGVNDDDFS IYADIEGPG
Subjt:  KILITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPG

XP_022925072.1 ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata]1.9e-17100Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

XP_022966429.1 ubiquitin-conjugating enzyme E2 22-like [Cucurbita maxima]1.9e-17100Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

TrEMBL top hitse value%identityAlignment
A0A2P5BUH2 Ubiquitin-fold modifier-conjugating enzyme1.2e-1794Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGM
        ATNENLPPNVIKQLAKELK+LDESPPEGIKVGVNDDDFS IYADIEGPG+
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGM

A0A6J1DJU4 ubiquitin-conjugating enzyme E2 229.3e-18100Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

A0A6J1EAT8 ubiquitin-conjugating enzyme E2 22-like9.3e-18100Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

A0A6J1HTS5 ubiquitin-conjugating enzyme E2 22-like9.3e-18100Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

W9S7M7 Ubiquitin-conjugating enzyme E2 229.3e-1892.16Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMS
        ATNENLPPNVIKQLAKELK+LDESPPEGIKVG+NDDDFS I+ADIEGPGMS
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMS

SwissProt top hitse value%identityAlignment
A7SE05 Ubiquitin-conjugating enzyme E2 S4.2e-0749.06Show/hide
Query:  LITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        + T  +  EN  P +IKQ+A+E+  L   PPEGIKV  ND+D + I A IEGP
Subjt:  LITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

C1C3R6 Ubiquitin-conjugating enzyme E2 S1.6e-0651.11Show/hide
Query:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ENLPP+VI+Q+ KE+ +L   PPEGIK+  N++D + +   IEGP
Subjt:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

C3Z724 Ubiquitin-conjugating enzyme E2 S1.6e-0652.17Show/hide
Query:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPG
        ENL P +I+Q+AKE+  L   PPEG+KV  N+ D + + A IEGPG
Subjt:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPG

Q28F89 Ubiquitin-conjugating enzyme E2 S1.2e-0648.89Show/hide
Query:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        ENLPP++I+Q+ KE+ +L   PPEGIK+  N++D + +  +IEGP
Subjt:  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

Q9FF66 Ubiquitin-conjugating enzyme E2 222.9e-1687.5Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

Arabidopsis top hitse value%identityAlignment
AT5G05080.1 ubiquitin-conjugating enzyme 222.0e-1787.5Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP

AT5G05080.2 ubiquitin-conjugating enzyme 222.0e-1787.5Show/hide
Query:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP
        A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP
Subjt:  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCCCGAACCCTATTCTCTACTCTGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGTTCTTGAGTGTCCTTGATCTTGTGCATCCTAACTGCATAGGTGTACT
AGACAAGATTCTGATCACAAGACATGCCACTAATGAAAATCTTCCACCGAATGTTATAAAGCAATTGGCAAAAGAGTTGAAGAGCCTCGATGAATCCCCTCCTGAAGGCA
TAAAAGTAGGTGTTAACGATGATGACTTTTCAACAATATATGCTGACATTGAAGGCCCAGGCATGTCGTCTATCACTCACAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCCCGAACCCTATTCTCTACTCTGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGTTCTTGAGTGTCCTTGATCTTGTGCATCCTAACTGCATAGGTGTACT
AGACAAGATTCTGATCACAAGACATGCCACTAATGAAAATCTTCCACCGAATGTTATAAAGCAATTGGCAAAAGAGTTGAAGAGCCTCGATGAATCCCCTCCTGAAGGCA
TAAAAGTAGGTGTTAACGATGATGACTTTTCAACAATATATGCTGACATTGAAGGCCCAGGCATGTCGTCTATCACTCACAGCTGA
Protein sequenceShow/hide protein sequence
MGSRTLFSTLRRCGKHHTGVQFLSVLDLVHPNCIGVLDKILITRHATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSSITHS