CuGenDBv2

Gene ID	Spg012915
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	kinetochore protein SPC24 homolog
Genome location	scaffold1:15867062..15868983
RNA-Seq Expression	Spg012915
Synteny	Spg012915
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-40

83.5

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Query:  MVQLFFFNTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMI
        M+ L F NT++T+EIN+LDRQRISVQERKQAMKKLE+QELR Q+KLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQ+FE DPT +S+FDICNGIWNMI
Subjt:  MVQLFFFNTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMI

Query:  NSP
        NSP
Subjt:  NSP

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

2.1e-38

91.49

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQ+KLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]

2.1e-38

91.49

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQ+KLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]

2.1e-38

90.43

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQ+KLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FDICN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]

4.3e-39

91.49

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQ+KLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXM7 Uncharacterized protein

2.7e-39

82.35

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Query:  VQLFFFNTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN
        ++L FFNTLVTNEINEL+ +R+SVQERKQAMKKLE+QEL AQ+KLSMYASVTDIIPNM+DQ+KISGHIVDRNKRVVQKFE DP K+S+FD CNG+WNMIN
Subjt:  VQLFFFNTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN

Query:  SP
        SP
Subjt:  SP

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X2

1.0e-38

91.49

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQ+KLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

1.0e-38

91.49

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQ+KLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

A0A6J1F034 uncharacterized protein LOC111438184

1.4e-38

89.36

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LV+N+INELDRQRISVQE+KQA KKLE+QELRAQ+KLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

A0A6J1HU69 uncharacterized protein LOC111466216

1.0e-38

90.43

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQ+KLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FDICN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

5.0e-22

51.09

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA+KKLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++ CN IW++IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

3.6e-23

51.09

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Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA+KKLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++ CN IW++IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMIN

AT5G01570.1 unknown protein

8.2e-12

42.68

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Query:  EINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTK-MSAFDICN
        ++ E  R     +E + A+K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K  S ++ CN
Subjt:  EINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTK-MSAFDICN

Sequences

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CDS sequence

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ATGTATTTGCCTGTCACATCTATGGTGCAACTGTTTTTCTTCAACACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCA
GGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAAGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCAGGCTAAAATTTCTG
GCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGGCATTTGGAATATGATTAATTCCCCA
TAG

mRNA sequence

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Protein sequence

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MYLPVTSMVQLFFFNTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQKKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDICNGIWNMINSP

Spg012915 (gene) of Sponge gourd (cylindrica) v1 genome