; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg012955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg012955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationscaffold1:10821127..10822753
RNA-Seq ExpressionSpg012955
SyntenySpg012955
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595132.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.2e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPE+KNEGRRTALLFLGASLFAAAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_022963255.1 photosystem I reaction center subunit N, chloroplastic-like isoform X1 [Cucurbita moschata]8.1e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023003251.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita maxima]6.2e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAA+SNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_023518442.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]2.8e-8598.25Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]4.0e-8495.91Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A1S3B240 photosystem I reaction center subunit N, chloroplastic4.3e-8495.32Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N4.3e-8495.32Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AVPSVASPGV GYKLPAIRAQQARVPEAKNEGRRTALL+LGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X16.3e-8394.15Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSA P VASPGV+GYKLPAIRAQQARVPEAKN+GRRTALL+LGA+LFAAAAAASNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFG+CKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1HHG7 photosystem I reaction center subunit N, chloroplastic-like isoform X13.9e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRA+QARVPEAKNEGRRTALLFLGASLFAAAAA+SNSSANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1KNN3 photosystem I reaction center subunit N, chloroplastic isoform X13.0e-8597.66Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAV SVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAA+SNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)6.8e-4285.87Show/hide
Query:  SNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        +  SA A + +EYLEKSKANKELNDKKRLATSGANFARAYTVEFGSC+FP NFTGCQDLAKQKKVPFISDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic8.5e-4568.75Show/hide
Query:  SAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCK
        +AVP  ASP           A   RV  A  + RR+ALL L A    AA AAS  SA A V +EYLEKSK NKELNDKKR ATSGANFARAYTV+FGSCK
Subjt:  SAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCK

Query:  FPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        FP NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  FPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic1.5e-5768.21Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic2.9e-2452.27Show/hide
Query:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFT
        A+RAQ A+V  A+           +   R  LL LG  L AAA A    +ANAGV+E+ L KS ANK LN+KKRLATS AN AR+ TV  G+C+FPENF 
Subjt:  AIRAQQARVPEAK-----------NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFT

Query:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS
        GC++LA  K V +I++DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)1.1e-5868.21Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)3.8e-4063.89Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA
        MA MNSSVL C+YAI+G+GS ELN K+  V S    G      +P I+AQ+    +   + GRR+A++FL A+LF+ AA   ++SANAGVI+EYLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYK-LPAIRAQQARVPEAK-NEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TV+FGSCKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCCGTGCCTTCTGTCGCATCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTG
CTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTAT
CTCTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCCGTGCCTTCTGTCGCATCGCCTGG
GGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTG
CTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACA
AGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTAT
CTCTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLAT
SGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW