CuGenDBv2

Gene ID	Spg012988
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RAB6-interacting golgin
Genome location	scaffold1:12037244..12040356
RNA-Seq Expression	Spg012988
Synteny	Spg012988
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	IPR007033 - RAB6-interacting golgin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595202.1 hypothetical protein SDJN03_11755, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-67

89.09

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQK+EKEYKDALDAFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

XP_022143816.1 uncharacterized protein LOC111013636 [Momordica charantia]

1.4e-65

90.57

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Query:  QQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKP
        Q +Q  QLMLQNSGNLSFSSK+DEEMSKSALSAFREKEEEIERMR ++  KLQARLGRVEEETRRL+SIREELEAIGDP RKEIGQIRKKIDAVNK+LKP
Subjt:  QQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKP

Query:  LGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        LG TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESE+LRMKRLEELSKHVDNTS
Subjt:  LGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

XP_022962812.1 uncharacterized protein KIAA1211-like [Cucurbita moschata]

1.7e-66

88.48

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQK+EKEYKDAL+AFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

XP_022972692.1 uncharacterized protein KIAA1211-like [Cucurbita maxima]

2.5e-67

89.7

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQKKEKEYKDALDAFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

XP_023517191.1 uncharacterized protein KIAA1211-like [Cucurbita pepo subsp. pepo]

5.7e-67

89.09

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQK+EKEYKDALDAFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHE9 RAB6-interacting golgin

8.3e-64

84.43

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Query:  MQPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAI-GDPMRKEIGQIRKKID
        MQ DQNP   QQLQ ML+NS NLSFSSK+D+EMSKSAL+AFREKEEEI+RMR+E++ KLQ RLGRV+EE+RRL+S+REELEAI GDPMRKEIGQIRKKID
Subjt:  MQPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAI-GDPMRKEIGQIRKKID

Query:  AVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        A+NK+LKPLG+TCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLR+KRLEELSKHVDNTS
Subjt:  AVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

A0A1S3CIS0 RAB6-interacting golgin

2.0e-65

85.63

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Query:  MQPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAI-GDPMRKEIGQIRKKID
        MQ DQNP   QQLQ ML+NSGNLSFSSK+D+EMSKSAL+AFREKEEEI+RMR+E+H KLQ RLGRV+EE+RRL+S+REELEAI GDPMRKEIGQIRKKID
Subjt:  MQPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAI-GDPMRKEIGQIRKKID

Query:  AVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        A+NK+LKPLG+TCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLR+KRLEELSKHVDNTS
Subjt:  AVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

A0A6J1CRG0 RAB6-interacting golgin

6.8e-66

90.57

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Query:  QQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKP
        Q +Q  QLMLQNSGNLSFSSK+DEEMSKSALSAFREKEEEIERMR ++  KLQARLGRVEEETRRL+SIREELEAIGDP RKEIGQIRKKIDAVNK+LKP
Subjt:  QQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKP

Query:  LGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        LG TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESE+LRMKRLEELSKHVDNTS
Subjt:  LGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

A0A6J1HDL2 RAB6-interacting golgin

8.0e-67

88.48

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQK+EKEYKDAL+AFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

A0A6J1I5J6 RAB6-interacting golgin

1.2e-67

89.7

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV
        Q +QNP Q QQLQLMLQNSGN SFSSKDDEEMSKSALSAFREKEEEIERMR+EV QKLQARLGRVEEE RRLASIREELEAI DPMRKEIGQIRK+IDAV
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAV

Query:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        NK+LKPLG TCQKKEKEYKDALDAFNEKN+EKVQL+SKLMEMVGESE+LR++RLEELSKHVDNTS
Subjt:  NKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

SwissProt top hits

e value

%identity

Alignment

B1H222 RAB6-interacting golgin

5.4e-04

28.69

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Query:  REKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLM
        R  EE+ +R ++ + Q +  R  R + ET +L  I++EL+A+ D +  +IG +R +ID  + +         + E EY  A      K   K QL   L 
Subjt:  REKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLM

Query:  EMVGESEKLRMKRLEELSKHVD
         ++ ++E  + ++LEEL + +D
Subjt:  EMVGESEKLRMKRLEELSKHVD

Q5T7V8 RAB6-interacting golgin

7.1e-04

29.51

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Query:  REKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLM
        R  EE+ +R ++ + + +  R  R + ET +L  I++EL+A+ D +  +IG +R +ID  + D         + E EY  A      K   K QL   L 
Subjt:  REKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLM

Query:  EMVGESEKLRMKRLEELSKHVD
         ++ ++E  + K+LEEL + +D
Subjt:  EMVGESEKLRMKRLEELSKHVD

Arabidopsis top hits

e value

%identity

Alignment

AT2G36410.1 Family of unknown function (DUF662)

4.4e-49

65.48

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI
        Q    PQ QQQ   M+ ++G+LSFS   S++DEEM++SALSAFR KE+EIE+ R EV +++QA+LGRVE+ET+RL++IREELE++ DPMRKE+  +RKKI
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI

Query:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEM---VGESEKLRMKRLEELSKHVD
        D+VNK+LKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLMEM   VGESEKLRM +LEELSK ++
Subjt:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEM---VGESEKLRMKRLEELSKHVD

AT2G36410.2 Family of unknown function (DUF662)

2.3e-50

66.06

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI
        Q    PQ QQQ   M+ ++G+LSFS   S++DEEM++SALSAFR KE+EIE+ R EV +++QA+LGRVE+ET+RL++IREELE++ DPMRKE+  +RKKI
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI

Query:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVD
        D+VNK+LKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLME+VGESEKLRM +LEELSK ++
Subjt:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVD

AT2G36410.3 Family of unknown function (DUF662)

3.3e-49

65.45

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Query:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI
        Q    PQ QQQ   M+ ++G+LSFS   S++DEEM++SALSAFR KE+EIE+ R EV +++QA+LGRVE+ET+RL++IREELE++ DPMRKE+  +RKKI
Subjt:  QPDQNPQQQQQLQLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKI

Query:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVD
        D+VNK+LKPLG T QKK  EYK+ALD FNEKN EKVQLI+KLME+VGESEKLRM +LEELSK ++
Subjt:  DAVNKDLKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVD

AT3G09980.1 Family of unknown function (DUF662)

4.7e-51

69.48

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Query:  QLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGL
        QL  Q SG++SFS   SK+DEEMS++ALSAFR KEEEIE+ + E+ +++QA+LGRVEEET+RLA IREELE + DPMRKE+  +RKKID+VNK+LKPLG 
Subjt:  QLMLQNSGNLSFS---SKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGL

Query:  TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDN
        T QKKE+EYK+AL+AFNEKN EKVQLI++LME+VGESEK+RMK+LEELSK++D+
Subjt:  TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDN

AT3G52920.2 Family of unknown function (DUF662)

3.7e-48

65.43

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Query:  QNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKD
        Q PQQ   L    Q        SK+DEEM++SALSAFR KE+EIE+ + EV ++++A+LGRVEEETRRLASIREELE + DPMRKE+  +RKKID+VNK+
Subjt:  QNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKD

Query:  LKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS
        LKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLME+VGESEKLR+K+L+ELS+ +D  S
Subjt:  LKPLGLTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGCCAGACCAAAATCCGCAGCAACAGCAGCAGCTTCAACTCATGTTACAGAATTCTGGAAATCTCAGTTTCAGTAGCAAAGACGATGAGGAGATGTCCAAATCCGC
GCTCTCGGCTTTTAGGGAAAAGGAAGAGGAGATCGAGCGGATGAGGTCCGAAGTTCACCAGAAACTTCAAGCTCGACTCGGCCGTGTCGAGGAAGAAACCAGGCGTTTGG
CTTCCATTCGAGAGGAACTTGAAGCAATAGGGGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATGCAGTAAACAAGGACTTAAAGCCTCTTGGACTG
ACATGCCAAAAAAAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAGAAAGTACAGTTAATATCAAAACTAATGGAGATGGTTGGTGAAAG
TGAAAAGCTGAGGATGAAGAGGTTGGAAGAACTGAGTAAGCATGTGGATAACACTTCCTAA

mRNA sequence

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Protein sequence

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MQPDQNPQQQQQLQLMLQNSGNLSFSSKDDEEMSKSALSAFREKEEEIERMRSEVHQKLQARLGRVEEETRRLASIREELEAIGDPMRKEIGQIRKKIDAVNKDLKPLGL
TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRMKRLEELSKHVDNTS

Spg012988 (gene) of Sponge gourd (cylindrica) v1 genome