; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013056 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013056
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationscaffold1:11674791..11680935
RNA-Seq ExpressionSpg013056
SyntenySpg013056
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7294.7Show/hide
Query:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT
        + NLMLTNVLDL W VP GVRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLT
Subjt:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT

Query:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

KAG6604338.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]5.4e-7192.76Show/hide
Query:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL
        R  C+L LTNVLDL   V   VRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL
Subjt:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL

Query:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        TGASTVGSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022963366.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]2.4e-7195.92Show/hide
Query:  MLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVLDL W VP GVRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]2.6e-7395.36Show/hide
Query:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT
        + NLMLTNVLDL W VP GVRGTWMDL ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLT
Subjt:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT

Query:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_023518928.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo]3.1e-7194.04Show/hide
Query:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT
        + NLMLTNVLDL   VP GVRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLT
Subjt:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT

Query:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein1.7e-6299.21Show/hide
Query:  MDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1EE43 vacuolar protein sorting-associated protein 55 homolog isoform X11.3e-7092.11Show/hide
Query:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL
        R  C+L LTNVLDL   V   VRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL
Subjt:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL

Query:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        TGASTVGSLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X11.2e-7195.92Show/hide
Query:  MLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVLDL W VP GVRGTWM+L ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X11.2e-7395.36Show/hide
Query:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT
        + NLMLTNVLDL W VP GVRGTWMDL ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLT
Subjt:  FCNLMLTNVLDLCWAVPHGVRGTWMDL-ISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLT

Query:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  GASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1IRY1 vacuolar protein sorting-associated protein 55 homolog isoform X11.1e-6989.47Show/hide
Query:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL
        R  C+L LTNVLDL  AV   +RGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKFL
Subjt:  RCFCNLMLTNVLDLCWAVPHGVRGTWMDLISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFL

Query:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        TGASTVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Subjt:  TGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 553.4e-0426.55Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF
        +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G+   T   +S         A FLTG      +A+P++  H  +I   +  +  
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF

Query:  VSFFIFVCTVLCF
        +   I   +++ F
Subjt:  VSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog6.4e-2755.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 551.2e-0425.21Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST    +  +    +   +F  GA+     A+PI+  +  +I T A  +  V 
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDD
          I    +  + +  ++ +
Subjt:  FFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein4.6e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein4.6e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein4.6e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein2.8e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein2.8e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCCTCCCCTCCGAGTTCTATGTCACAAACACCAGTTAACAAAGAACATTGACAGCAAAGAACAAGGACTGACAGACCAATCCACTGATGGCCAAAGCTACTT
AAAAGTCCCCCTCCGTGAAGCCCAACTGGAGAAGTGGAGCTCAAATCCTGCCTTATTCGTCGCGATCGAGGGCGAGATTCATTACGCTTCACTGCTGCTGGAACTTCTAG
CTTGTTATAATGACGATGACATTGGAAGATGTTTCTGTAATTTAATGTTAACCAATGTTCTTGATCTTTGTTGGGCGGTGCCTCATGGTGTTCGGGGAACATGGATGGAT
CTCATATCTGCAGTATTAGCTGGGCTTGCGTTTATGTTTTCATCTAGCATCTTGCTACAGATTTTGGCTTGTGCATTATACAACAATTGGTGGCCTCTGTTATCAGCTTT
GATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGCGGGTCCACGCAGTTTTTGATTAGTCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACTG
GAGCTTCAACTGTGGGGAGCTTGGCAATTCCTATCATCCTCAGACATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATTTTTGTTTGC
ACTGTGCTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATCCTCCCCTCCGAGTTCTATGTCACAAACACCAGTTAACAAAGAACATTGACAGCAAAGAACAAGGACTGACAGACCAATCCACTGATGGCCAAAGCTACTT
AAAAGTCCCCCTCCGTGAAGCCCAACTGGAGAAGTGGAGCTCAAATCCTGCCTTATTCGTCGCGATCGAGGGCGAGATTCATTACGCTTCACTGCTGCTGGAACTTCTAG
CTTGTTATAATGACGATGACATTGGAAGATGTTTCTGTAATTTAATGTTAACCAATGTTCTTGATCTTTGTTGGGCGGTGCCTCATGGTGTTCGGGGAACATGGATGGAT
CTCATATCTGCAGTATTAGCTGGGCTTGCGTTTATGTTTTCATCTAGCATCTTGCTACAGATTTTGGCTTGTGCATTATACAACAATTGGTGGCCTCTGTTATCAGCTTT
GATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGCGGGTCCACGCAGTTTTTGATTAGTCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACTG
GAGCTTCAACTGTGGGGAGCTTGGCAATTCCTATCATCCTCAGACATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATTTTTGTTTGC
ACTGTGCTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
Protein sequenceShow/hide protein sequence
MSNPPLRVLCHKHQLTKNIDSKEQGLTDQSTDGQSYLKVPLREAQLEKWSSNPALFVAIEGEIHYASLLLELLACYNDDDIGRCFCNLMLTNVLDLCWAVPHGVRGTWMD
LISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVC
TVLCFHRVSLEDDW