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Spg013154 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013154
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor MYC2-like
Genome locationscaffold1:5231849..5233800
RNA-Seq ExpressionSpg013154
SyntenySpg013154
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR025610 - Transcription factor MYC/MYB N-terminal
IPR045084 - Transcription factor AIB/MYC-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140617.1 transcription factor MYC2 [Cucumis sativus]2.4e-2048.97Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS
        + KEAKSHGIQT +C+PT  GVLELASQ IIPE+W ++QQ+K LF S    FS TT TPLPF                        LR +  T   + + 
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS

Query:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
              KTG   ++ +++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

XP_016902487.1 PREDICTED: transcription factor MYC2-like [Cucumis melo]1.9e-2048.97Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS
        + KEAKSHGIQT +C+PT  GVLELASQ IIPE+W ++QQ+K LF      FSNTT TPLPF                        LR +  T   + + 
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS

Query:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
              KTG   ++ +++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

XP_023006584.1 transcription factor MYC2-like [Cucurbita maxima]1.7e-1847.18Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFL---------RFRQHTARAQTNSEKTGQS----------
        +AKEAKSHGIQTL+C+P P GVLELAS  IIPE+W +VQQVK +  S +S F+N+++PLPFL          F       +      G+S          
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFL---------RFRQHTARAQTNSEKTGQS----------

Query:  ------------SKRQGRKPNPSKDNATNHVEAERQRREKLN
                     KR+GRK    K+NATNHVEAERQRREKLN
Subjt:  ------------SKRQGRKPNPSKDNATNHVEAERQRREKLN

XP_038875083.1 transcription factor MYC1-like [Benincasa hispida]8.9e-2348.73Show/hide
Query:  PSSSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT-PLPFL------------------------RFR
        P    L    + KEAKSHGIQTL+C+PT  GVLELASQ IIPE+W+++QQ+K LF S LS F+NT++ PLPFL                        R +
Subjt:  PSSSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT-PLPFL------------------------RFR

Query:  QHTAR-----------AQTNSEKTGQSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
          T             A+T ++KTGQ   ++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  QHTAR-----------AQTNSEKTGQSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

XP_039061358.1 transcription factor MYC4-like [Hibiscus syriacus]9.6e-1751.28Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFLRFRQHT-----ARAQTNSEKTGQSSKRQGRKPNPSKDN
        +AKEA+ HGI+TLVCIPT SGVLEL S  II ENW +VQQVK LF S     SN    L      +H+      RA+  ++    + K++GRKP   ++N
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFLRFRQHT-----ARAQTNSEKTGQSSKRQGRKPNPSKDN

Query:  ATNHVEAERQRREKLNN
          NHVEAERQRREKLN+
Subjt:  ATNHVEAERQRREKLNN

TrEMBL top hitse value%identityAlignment
A0A0A0KFN7 BHLH domain-containing protein1.2e-2048.97Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS
        + KEAKSHGIQT +C+PT  GVLELASQ IIPE+W ++QQ+K LF S    FS TT TPLPF                        LR +  T   + + 
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS

Query:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
              KTG   ++ +++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

A0A1S4E2N5 transcription factor MYC2-like9.0e-2148.97Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS
        + KEAKSHGIQT +C+PT  GVLELASQ IIPE+W ++QQ+K LF      FSNTT TPLPF                        LR +  T   + + 
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS

Query:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
              KTG   ++ +++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

A0A5A7TCG3 Transcription factor MYC2-like9.0e-2148.97Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS
        + KEAKSHGIQT +C+PT  GVLELASQ IIPE+W ++QQ+K LF      FSNTT TPLPF                        LR +  T   + + 
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTT-TPLPF------------------------LRFRQHTARAQTNS

Query:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN
              KTG   ++ +++GRKPN SK+NA NHVEAERQRREKLNN
Subjt:  E-----KTG---QSSKRQGRKPNPSKDNATNHVEAERQRREKLNN

A0A6A3C4H0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain4.6e-1751.28Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFLRFRQHT-----ARAQTNSEKTGQSSKRQGRKPNPSKDN
        +AKEA+ HGI+TLVCIPT SGVLEL S  II ENW +VQQVK LF S     SN    L      +H+      RA+  ++    + K++GRKP   ++N
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFLRFRQHT-----ARAQTNSEKTGQSSKRQGRKPNPSKDN

Query:  ATNHVEAERQRREKLNN
          NHVEAERQRREKLN+
Subjt:  ATNHVEAERQRREKLNN

A0A6J1L2K7 transcription factor MYC2-like8.4e-1947.18Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFL---------RFRQHTARAQTNSEKTGQS----------
        +AKEAKSHGIQTL+C+P P GVLELAS  IIPE+W +VQQVK +  S +S F+N+++PLPFL          F       +      G+S          
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTTPLPFL---------RFRQHTARAQTNSEKTGQS----------

Query:  ------------SKRQGRKPNPSKDNATNHVEAERQRREKLN
                     KR+GRK    K+NATNHVEAERQRREKLN
Subjt:  ------------SKRQGRKPNPSKDNATNHVEAERQRREKLN

SwissProt top hitse value%identityAlignment
A0A060KY90 Transcription factor MYC17.4e-0433.78Show/hide
Query:  SSARISPCSPSSSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNT
        SS+ I        +  Q  +A++A+  G+QT+VCIP+ +GV+EL S  +I ++  ++ +VK LF  ++ + S T
Subjt:  SSARISPCSPSSSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNT

A0A060KY90 Transcription factor MYC11.0e+0062.07Show/hide
Query:  KRQGRKPNPSKDNATNHVEAERQRREKLN
        +++GRKP   ++   NHVEAERQRREKLN
Subjt:  KRQGRKPNPSKDNATNHVEAERQRREKLN

A0A3Q7ELQ2 Transcription factor MTB11.1e-0442.37Show/hide
Query:  SSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSI
        +S+L    ++  AKS G+QT+  IPT  GV+EL S   IPE+  ++Q +K  F+S LS+
Subjt:  SSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSI

A0A3Q7ELQ2 Transcription factor MTB11.0e+0062.07Show/hide
Query:  KRQGRKPNPSKDNATNHVEAERQRREKLN
        +++GRKP   ++   NHVEAERQRREKLN
Subjt:  KRQGRKPNPSKDNATNHVEAERQRREKLN

A0A3Q7H216 Transcription factor MTB31.5e-0430.77Show/hide
Query:  AKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSIFSNTTTPLPF---------LRFRQHTARAQT---NSEK
        AK    +TLV +P  SGV+EL S   IPE+ +++Q VK                +F   LS+    + P+           L F   +   Q    +S+ 
Subjt:  AKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSIFSNTTTPLPF---------LRFRQHTARAQT---NSEK

Query:  TGQSS----------------------KRQGRKPNPSKDNATNHVEAERQRREKLN
         G SS                      +++GRKP   ++ A NHVEAERQRREKLN
Subjt:  TGQSS----------------------KRQGRKPNPSKDNATNHVEAERQRREKLN

O23090 Transcription factor bHLH141.2e-0634.45Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT---PLPFLRFRQHTARAQTNSEKTGQSSKRQGRKPNPSKDN--
        +AKEA  HG+ TLV IP  +G++EL S   I +N + + +VK +F S  +      T   P P +     +   Q  SE+  +      R    +K+   
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT---PLPFLRFRQHTARAQTNSEKTGQSSKRQGRKPNPSKDN--

Query:  --ATNHVEAERQRREKLNN
            +HVEAE+QRREKLN+
Subjt:  --ATNHVEAERQRREKLNN

O23487 Transcription factor bHLH31.0e-0530.52Show/hide
Query:  RLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSI-----------FSNTTTPLPFLRFRQHTARAQ
        R+++  A+S G QT++ +P  SGV+EL S   IPE+ S+++ VK                +F   LS+           FS  T          +  +A 
Subjt:  RLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSI-----------FSNTTTPLPFLRFRQHTARAQ

Query:  TNSEKT---------------GQSSKRQGRKPNPSKDNATNHVEAERQRREKLN
          S +                 Q  +++GRKP   ++ A NHVEAERQRREKLN
Subjt:  TNSEKT---------------GQSSKRQGRKPNPSKDNATNHVEAERQRREKLN

Arabidopsis top hitse value%identityAlignment
AT2G46510.1 ABA-inducible BHLH-type transcription factor4.0e-0545.45Show/hide
Query:  AKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLS----IFSNT
        AKS GI+T+V +PT +GVLEL S   +PEN  +V+ V+ LF   ++    + SNT
Subjt:  AKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLS----IFSNT

AT2G46510.1 ABA-inducible BHLH-type transcription factor7.1e-0262.07Show/hide
Query:  KRQGRKPNPSKDNATNHVEAERQRREKLN
        +++GRKP   ++   NHVEAERQRREKLN
Subjt:  KRQGRKPNPSKDNATNHVEAERQRREKLN

AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.7e-0834.45Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT---PLPFLRFRQHTARAQTNSEKTGQSSKRQGRKPNPSKDN--
        +AKEA  HG+ TLV IP  +G++EL S   I +N + + +VK +F S  +      T   P P +     +   Q  SE+  +      R    +K+   
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHLSIFSNTTT---PLPFLRFRQHTARAQTNSEKTGQSSKRQGRKPNPSKDN--

Query:  --ATNHVEAERQRREKLNN
            +HVEAE+QRREKLN+
Subjt:  --ATNHVEAERQRREKLNN

AT4G16430.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.3e-0730.52Show/hide
Query:  RLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSI-----------FSNTTTPLPFLRFRQHTARAQ
        R+++  A+S G QT++ +P  SGV+EL S   IPE+ S+++ VK                +F   LS+           FS  T          +  +A 
Subjt:  RLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVK---------------PLFASHLSI-----------FSNTTTPLPFLRFRQHTARAQ

Query:  TNSEKT---------------GQSSKRQGRKPNPSKDNATNHVEAERQRREKLN
          S +                 Q  +++GRKP   ++ A NHVEAERQRREKLN
Subjt:  TNSEKT---------------GQSSKRQGRKPNPSKDNATNHVEAERQRREKLN

AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein7.6e-0437.78Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLF
        +A++ + +G+QT+VC+ T +GV+EL S  II ++  +V +V   F
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLF

AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein7.1e-0262.07Show/hide
Query:  KRQGRKPNPSKDNATNHVEAERQRREKLN
        +++GRKP   ++   NHVEAERQRREKLN
Subjt:  KRQGRKPNPSKDNATNHVEAERQRREKLN

AT5G46830.1 NACL-inducible gene 12.6e-0428.25Show/hide
Query:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFA----------SHLSIF--------SNTTT----PLPFLRFRQHTARAQTNS---
        +AK+    G+QT++CIP+ +GVLELAS   I  N  +  +++ LF           S+  +F        S+T T    P P     ++     T+S   
Subjt:  KAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFA----------SHLSIF--------SNTTT----PLPFLRFRQHTARAQTNS---

Query:  ------------EKTGQS----------------------------SKRQGRKPNPSKDNATNHVEAERQRREKLNN
                    E   QS                             K++GRKP   +D   NHVEAER RREKLN+
Subjt:  ------------EKTGQS----------------------------SKRQGRKPNPSKDNATNHVEAERQRREKLNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCTGTTTCTCCGCCTCATTCTCTTTTGCCTCGGAATTCAGGATTTCCATCTCATCTTGGAGCCAGATTATGTGAATGGGACACACCTACTCTTGTGATTTGGCA
AGAACATCTGCATAACTCAAGTGCAAGAATCTCCCCCTGTTCCCCCTCCTCGTCGTCTCTCCAGCAACGCCTCAAAGCCAAAGAGGCCAAATCCCACGGCATCCAGACCC
TCGTCTGCATTCCCACCCCTTCCGGCGTCCTCGAGCTCGCTTCCCAACACATCATCCCCGAGAACTGGTCCATTGTCCAGCAAGTCAAACCCCTCTTCGCCTCCCATCTC
TCCATTTTCTCCAACACTACCACCCCGCTTCCCTTTCTCCGATTCCGACAGCACACTGCCCGAGCCCAAACCAACAGCGAGAAAACAGGGCAGTCCTCGAAGAGACAAGG
TCGGAAGCCGAATCCGAGCAAAGACAACGCCACCAACCACGTGGAGGCGGAGCGGCAGAGAAGGGAGAAGCTCAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCTGTTTCTCCGCCTCATTCTCTTTTGCCTCGGAATTCAGGATTTCCATCTCATCTTGGAGCCAGATTATGTGAATGGGACACACCTACTCTTGTGATTTGGCA
AGAACATCTGCATAACTCAAGTGCAAGAATCTCCCCCTGTTCCCCCTCCTCGTCGTCTCTCCAGCAACGCCTCAAAGCCAAAGAGGCCAAATCCCACGGCATCCAGACCC
TCGTCTGCATTCCCACCCCTTCCGGCGTCCTCGAGCTCGCTTCCCAACACATCATCCCCGAGAACTGGTCCATTGTCCAGCAAGTCAAACCCCTCTTCGCCTCCCATCTC
TCCATTTTCTCCAACACTACCACCCCGCTTCCCTTTCTCCGATTCCGACAGCACACTGCCCGAGCCCAAACCAACAGCGAGAAAACAGGGCAGTCCTCGAAGAGACAAGG
TCGGAAGCCGAATCCGAGCAAAGACAACGCCACCAACCACGTGGAGGCGGAGCGGCAGAGAAGGGAGAAGCTCAACAACTGA
Protein sequenceShow/hide protein sequence
MQPVSPPHSLLPRNSGFPSHLGARLCEWDTPTLVIWQEHLHNSSARISPCSPSSSSLQQRLKAKEAKSHGIQTLVCIPTPSGVLELASQHIIPENWSIVQQVKPLFASHL
SIFSNTTTPLPFLRFRQHTARAQTNSEKTGQSSKRQGRKPNPSKDNATNHVEAERQRREKLNN