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Spg013178 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013178
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold1:20121730..20122287
RNA-Seq ExpressionSpg013178
SyntenySpg013178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]2.7e-0930.2Show/hide
Query:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------
        N+RG   EI +V + G K  +++  G +  GW     L  D L  K    +K+ P      +DKGK        +   +S+ SETPR             
Subjt:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------

Query:  --DFREQNLCSSGRVTTELKG---------SKEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQLEEP---FVINPFQPDKALLKCPTAKMADLLSMN
              ++ CS  + T  LK           KEE +N IDW + +++++R  HDDW +I+D L+ Q ++    F   PF  DKALL     ++A+LL  N
Subjt:  --DFREQNLCSSGRVTTELKG---------SKEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQLEEP---FVINPFQPDKALLKCPTAKMADLLSMN

Query:  RG
         G
Subjt:  RG

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]7.1e-1029.57Show/hide
Query:  RSTSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKIN-PEIPNKRRDKGKLFADIVRNKPRSN-------SSHSETPRD
        + T N++G   EI +V + G K  +++  G E  GW  F  L    L+GK +   K N   I N +   G   +D   +  R +        S S+   +
Subjt:  RSTSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKIN-PEIPNKRRDKGKLFADIVRNKPRSN-------SSHSETPRD

Query:  FREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
         R +N+  +G+  T          + DW    V+T+R  HDDW RI++ L +QL+      PF  DKAL+     + A LL  N+G
Subjt:  FREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]4.6e-0931.63Show/hide
Query:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------
        N+RG   EI +V + G K  +++  G +  GW     L  D L  K    +K         +DKGK        KP  +S+ SE+PR             
Subjt:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------

Query:  --DF-REQNLCSSGRVTTELKGS--KEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQL---EEPFVINPFQPDKALLKCPTAKMADLLSMNRG
          D+ + +N  S  R    +K    KEE +N IDW + +++++R  HDDW +I+D L++Q    E  F   PF  DKALL      +A LL  N G
Subjt:  --DF-REQNLCSSGRVTTELKGS--KEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQL---EEPFVINPFQPDKALLKCPTAKMADLLSMNRG

TYK18307.1 hypothetical protein E5676_scaffold456G00160 [Cucumis melo var. makuwa]7.9e-0929.32Show/hide
Query:  TSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKI--NPEIPNKRR-----------DKGKLFADIVRNKPRSNSS--HS
        T N++G   EI KV N G +  +++  G +  GW  FA    D LN K E   K+     + +KR+           D  + +A +V     S+    H 
Subjt:  TSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKI--NPEIPNKRR-----------DKGKLFADIVRNKPRSNSS--HS

Query:  ETPRDFREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
         T  + RE+          + KG + +    DWN+ +V+  R  HDD  RI++ L++QL++P    PF   KAL+     + A L+  NRG
Subjt:  ETPRDFREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]6.2e-1454.55Show/hide
Query:  EEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
        EEVR ++W E +V+T+RD HDDW RIL  +++Q E  ++INPFQ DKAL+KCP+  +A LL  N+G
Subjt:  EEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein2.2e-0931.63Show/hide
Query:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------
        N+RG   EI +V + G K  +++  G +  GW     L  D L  K    +K         +DKGK        KP  +S+ SE+PR             
Subjt:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------

Query:  --DF-REQNLCSSGRVTTELKGS--KEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQL---EEPFVINPFQPDKALLKCPTAKMADLLSMNRG
          D+ + +N  S  R    +K    KEE +N IDW + +++++R  HDDW +I+D L++Q    E  F   PF  DKALL      +A LL  N G
Subjt:  --DF-REQNLCSSGRVTTELKGS--KEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQL---EEPFVINPFQPDKALLKCPTAKMADLLSMNRG

A0A5A7TFK7 DUF4283 domain-containing protein3.4e-1029.57Show/hide
Query:  RSTSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKIN-PEIPNKRRDKGKLFADIVRNKPRSN-------SSHSETPRD
        + T N++G   EI +V + G K  +++  G E  GW  F  L    L+GK +   K N   I N +   G   +D   +  R +        S S+   +
Subjt:  RSTSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKIN-PEIPNKRRDKGKLFADIVRNKPRSN-------SSHSETPRD

Query:  FREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
         R +N+  +G+  T          + DW    V+T+R  HDDW RI++ L +QL+      PF  DKAL+     + A LL  N+G
Subjt:  FREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

A0A5D3D436 Uncharacterized protein3.8e-0929.32Show/hide
Query:  TSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKI--NPEIPNKRR-----------DKGKLFADIVRNKPRSNSS--HS
        T N++G   EI KV N G +  +++  G +  GW  FA    D LN K E   K+     + +KR+           D  + +A +V     S+    H 
Subjt:  TSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKI--NPEIPNKRR-----------DKGKLFADIVRNKPRSNSS--HS

Query:  ETPRDFREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
         T  + RE+          + KG + +    DWN+ +V+  R  HDD  RI++ L++QL++P    PF   KAL+     + A L+  NRG
Subjt:  ETPRDFREQNLCSSGRVTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

A0A5D3DLT1 DUF4283 domain-containing protein1.3e-0930.2Show/hide
Query:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------
        N+RG   EI +V + G K  +++  G +  GW     L  D L  K    +K+ P      +DKGK        +   +S+ SETPR             
Subjt:  NKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPR-------------

Query:  --DFREQNLCSSGRVTTELKG---------SKEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQLEEP---FVINPFQPDKALLKCPTAKMADLLSMN
              ++ CS  + T  LK           KEE +N IDW + +++++R  HDDW +I+D L+ Q ++    F   PF  DKALL     ++A+LL  N
Subjt:  --DFREQNLCSSGRVTTELKG---------SKEEVRN-IDWNEVLVVTKRDLHDDWGRILDILQQQLEEP---FVINPFQPDKALLKCPTAKMADLLSMN

Query:  RG
         G
Subjt:  RG

A0A6J1D6X4 uncharacterized protein LOC1110181863.0e-1454.55Show/hide
Query:  EEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG
        EEVR ++W E +V+T+RD HDDW RIL  +++Q E  ++INPFQ DKAL+KCP+  +A LL  N+G
Subjt:  EEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATATGGATTCAAAAGATCGACCTCAAACAAACGAGGAAGCTTCCTCGAAATCACGAAAGTTATTAACTCAGGTGGGAAACACAATTTGGTTATTCAGGCTGG
CTTTGAATTTCAAGGCTGGAAAGATTTTGCAGGACTTTTGAAAGATTTTCTCAACGGAAAAGATGAGAAACCGGAAAAGATAAACCCTGAAATACCAAACAAAAGGAGAG
ATAAAGGAAAATTGTTTGCTGATATAGTTAGAAACAAACCACGCTCCAACTCCTCCCACTCTGAAACACCAAGAGACTTTCGGGAACAGAATTTATGCAGCAGCGGGAGA
GTTACAACAGAGCTTAAAGGAAGCAAAGAAGAAGTAAGGAATATTGACTGGAATGAGGTTCTAGTGGTTACTAAAAGAGATCTTCATGATGACTGGGGCCGCATCCTAGA
TATTCTACAACAACAGCTGGAAGAACCCTTTGTCATTAACCCGTTTCAACCAGATAAGGCCCTCCTTAAATGCCCAACAGCAAAAATGGCAGACTTGCTTTCAATGAACA
GAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCATATGGATTCAAAAGATCGACCTCAAACAAACGAGGAAGCTTCCTCGAAATCACGAAAGTTATTAACTCAGGTGGGAAACACAATTTGGTTATTCAGGCTGG
CTTTGAATTTCAAGGCTGGAAAGATTTTGCAGGACTTTTGAAAGATTTTCTCAACGGAAAAGATGAGAAACCGGAAAAGATAAACCCTGAAATACCAAACAAAAGGAGAG
ATAAAGGAAAATTGTTTGCTGATATAGTTAGAAACAAACCACGCTCCAACTCCTCCCACTCTGAAACACCAAGAGACTTTCGGGAACAGAATTTATGCAGCAGCGGGAGA
GTTACAACAGAGCTTAAAGGAAGCAAAGAAGAAGTAAGGAATATTGACTGGAATGAGGTTCTAGTGGTTACTAAAAGAGATCTTCATGATGACTGGGGCCGCATCCTAGA
TATTCTACAACAACAGCTGGAAGAACCCTTTGTCATTAACCCGTTTCAACCAGATAAGGCCCTCCTTAAATGCCCAACAGCAAAAATGGCAGACTTGCTTTCAATGAACA
GAGGATGA
Protein sequenceShow/hide protein sequence
MGSYGFKRSTSNKRGSFLEITKVINSGGKHNLVIQAGFEFQGWKDFAGLLKDFLNGKDEKPEKINPEIPNKRRDKGKLFADIVRNKPRSNSSHSETPRDFREQNLCSSGR
VTTELKGSKEEVRNIDWNEVLVVTKRDLHDDWGRILDILQQQLEEPFVINPFQPDKALLKCPTAKMADLLSMNRG