CuGenDBv2

Gene ID	Spg013213
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	40S ribosomal protein S6
Genome location	scaffold1:6866064..6870678
RNA-Seq Expression	Spg013213
Synteny	Spg013213
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005840 - ribosome (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001377 - Ribosomal protein S6e IPR017956 - AT hook, DNA-binding motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_007205780.1 40S ribosomal protein S6 [Prunus persica]

1.2e-83

72.58

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEVNGDALGE                                     TPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKG+NDLPGLTD+EKPRMRGPKRASKIRKLFNL+KDDDVRK  +    +F   +G +     KIQRL+TPLTLQRKR RIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKPS A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA

XP_018847771.1 40S ribosomal protein S6-like [Juglans regia]

3.1e-84

74.3

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Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEV+GDALG+                       V TP            CFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGE+DLPGLTD+EKPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   SG +     KIQRL+TPLTLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLA+RLKEQRERRSESLAKRRS+LSGASKPSIAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

XP_022133330.1 40S ribosomal protein S6-like [Momordica charantia]

1.3e-85

75.1

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Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEV+GDALGE                                     TPCFRG+GRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   SG +     KIQRL+TPLTLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPS AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

XP_038882784.1 40S ribosomal protein S6-like [Benincasa hispida]

3.7e-85

74.3

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Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEVNGDALGE                                     TPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI++PDLSVLNLVIVKKGENDLPGLTDI+KPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   +G +     KIQRL+TP TLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSI A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

XP_042971456.1 40S ribosomal protein S6-like [Carya illinoinensis]

1.2e-83

73.9

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Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEV+GDALG+                       V TP            CFRGYGRRNGERRRKSV 
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGE+DLPGLTD+EKPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   SG +     KIQRL+TPLTLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAK+EAAEYQKLLA+RLKEQRERRSESLAKRRSKLSGASKPSIAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

TrEMBL top hits

e value

%identity

Alignment

A0A2I4GV42 40S ribosomal protein S6

1.5e-84

74.3

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEV+GDALG+                       V TP            CFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------VSTP------------CFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGE+DLPGLTD+EKPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   SG +     KIQRL+TPLTLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLA+RLKEQRERRSESLAKRRS+LSGASKPSIAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

A0A5A7P068 40S ribosomal protein S6

5.8e-84

73.49

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEVNGDALGE                                     TPCFRG+GRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNLSK+DDVRK  +    +F   SG +     KIQRL+TPLTLQRKR RIA+KK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLS ASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

A0A6J1BUY4 40S ribosomal protein S6

6.2e-86

75.1

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEV+GDALGE                                     TPCFRG+GRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRK  +    +F   SG +     KIQRL+TPLTLQRKRGRIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPS AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

A0A6J5XSH6 40S ribosomal protein S6

5.8e-84

72.58

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEVNGDALGE                                     TPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKG+NDLPGLTD+EKPRMRGPKRASKIRKLFNL+KDDDVRK  +    +F   +G +     KIQRL+TPLTLQRKR RIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKPS A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA

M5VZU7 40S ribosomal protein S6

5.8e-84

72.58

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR FWDKRISQEVNGDALGE                                     TPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKG+NDLPGLTD+EKPRMRGPKRASKIRKLFNL+KDDDVRK  +    +F   +G +     KIQRL+TPLTLQRKR RIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKRRS+LSGASKPS A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIA

SwissProt top hits

e value

%identity

Alignment

O48549 40S ribosomal protein S6-1

2.3e-77

66.8

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLR F+DKRISQEV+GDALGE                                     TPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVR   +     F    G +     KIQRL+TPLTLQRKR RIA+KK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KPS+ A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA

P29345 40S ribosomal protein S6 (Fragment)

6.8e-58

76.65

Show/hide

Query:  TPCFRGYGRRNGERRRKSVRGCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQA----KIQR
        TPCFRGYGRRNGERRRKSVRGCI+SPDLSVLNLVIVKKGENDLPGLTD EKPRMRGP+   +   L+   K+DDVRK Y   +    + W+     KIQR
Subjt:  TPCFRGYGRRNGERRRKSVRGCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQA----KIQR

Query:  LITPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        L+TPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQRE+RSESLAK+RS+LS ASKPSIAA
Subjt:  LITPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

P51430 40S ribosomal protein S6-2

4.3e-76

65.86

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLR F+DKR+SQEV+GDALGE                                     TPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKG +DLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRK  +    +F    G +     KIQRL+TPLTLQRKR RIA+KK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

Q5E995 40S ribosomal protein S6

2.6e-49

52.34

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------------------VSTPCFRGYGRRNGERRRKSVR
        MK NI+ P TGCQK +E+DD+ KLR F++KR++ EV  DALGE                                       C+R   RR GER+RKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGE-----------------------------------VSTPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQ-----AKIQRLITPLTLQRKRGRIAEKKK
        GCI+  +LSVLNLVIVKKGE D+PGLTD   PR  GPKRAS+IRKLFNLSK+DDVR+ Y V   L   G +      KIQRL+TP  LQ KR RIA KK+
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQ-----AKIQRLITPLTLQRKRGRIAEKKK

Query:  RIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRR
        R  K K EAAEY KLLA R+KE +E+R E +AKRR
Subjt:  RIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRR

Q9M3V8 40S ribosomal protein S6

5.7e-81

70.78

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFNIANPTTGCQKKLEIDDD KLR F+DKRISQEV+GDALGE                                     TPCFRGYGRRNGERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTD+EKPRMRGPKRASKIRKLFNLSK+DDVRK  +    +F    G       KIQRL+TPLTLQRKR RIAEKK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGAS
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAK+RS+LS A+
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGAS

Arabidopsis top hits

e value

%identity

Alignment

AT4G31700.1 ribosomal protein S6

1.6e-78

66.8

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLR F+DKRISQEV+GDALGE                                     TPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVR   +     F    G +     KIQRL+TPLTLQRKR RIA+KK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KPS+ A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA

AT4G31700.2 ribosomal protein S6

5.7e-60

75.88

Show/hide

Query:  TPCFRGYGRRNGERRRKSVRGCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KI
        TPCFRG+GRR GERRRKSVRGCI+SPDLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVR   +     F    G +     KI
Subjt:  TPCFRGYGRRNGERRRKSVRGCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KI

Query:  QRLITPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA
        QRL+TPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+L S A+KPS+ A
Subjt:  QRLITPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKL-SGASKPSIAA

AT5G10360.1 Ribosomal protein S6e

3.0e-77

65.86

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLR F+DKR+SQEV+GDALGE                                     TPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK
        GCI+SPDLSVLNLVIVKKG +DLPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRK  +    +F    G +     KIQRL+TPLTLQRKR RIA+KK
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSV--NSFLLLSGWQA----KIQRLITPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

AT5G10360.2 Ribosomal protein S6e

6.1e-54

54.32

Show/hide

Query:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR
        MKFN+ANPTTGCQKKLEIDDD KLR F+DKR+SQEV+GDALGE                                     TPCFRG+GRR GERRRKSVR
Subjt:  MKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDALGEV-----------------------------------STPCFRGYGRRNGERRRKSVR

Query:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQAKIQRLITPLTLQRKRGRIAEKKKRIAKA
        GCI+SPDLSVLNLVIVKKG                  K+ SK                              KIQRL+TPLTLQRKR RIA+KKKRIAKA
Subjt:  GCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQAKIQRLITPLTLQRKRGRIAEKKKRIAKA

Query:  KSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA
         S+AA+YQKLLASRLKEQR+RRSESLAK+RS+LS A    +AA
Subjt:  KSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

Sequences

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CDS sequence

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ATGGTCGGACATTTCCTTACTGCTTTGAATGCGTGCCTGAGGGTTGGCTTCGGAACTGTGACGCTCGGCCTCGGCCTTGGCATGAGGTCGAGCATTTCCTCTGCTTTGCT
TGCTAATTTGCTCTTTTGTATCCATCCCGAGGGGGCGTACACTCAATCGGGGAAAAGCTTGGGAAGGCCAAGGAAATACCCCAGCCTCTCGTCAAGCGCTGCATTCATCC
CAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCTGCATGGTCATCTCAAGGGTGCGTACACTCTTCTGGGGA
AAAGGCTTGGGGAGGCCTAGGAAGTTCCCGAGCCTCTCTTCAAGCTGCTGTGTTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTACGAAGT
TCCCGAGCCTCTCTTCAAGCTGCTGTGTTCATCCCAGGGCCCTAATCCGCCGCAAAAAGAGCCGGAGCAGGAGCGCCATTCTTCGGTCGCAGAGAAGATGAAGTTCAACA
TTGCAAATCCCACTACTGGGTGCCAGAAAAAGCTCGAAATCGACGACGATGTCAAACTCCGGCCATTTTGGGATAAGAGAATCTCCCAAGAAGTTAATGGAGATGCACTT
GGTGAAGTGAGCACTCCTTGTTTCCGTGGTTATGGTCGGAGGAATGGTGAGAGAAGAAGGAAGTCTGTCCGGGGTTGCATTCTCAGTCCAGACCTCTCTGTTTTGAATTT
GGTGATTGTGAAGAAGGGTGAGAACGATCTACCTGGGCTAACAGATATTGAGAAGCCGAGAATGCGAGGTCCGAAAAGGGCATCCAAGATCCGGAAGCTCTTCAACCTCT
CCAAGGACGATGATGTTCGAAAGTTATACTCTGTGAATTCATTTTTGTTGTTATCTGGTTGGCAGGCCAAAATCCAGAGACTGATAACTCCCTTGACTCTCCAAAGGAAG
CGAGGAAGGATTGCTGAAAAGAAAAAGAGAATTGCCAAAGCTAAGTCCGAAGCAGCCGAGTATCAGAAGCTTCTAGCATCACGTTTGAAGGAACAACGCGAACGCCGAAG
TGAGAGCTTAGCAAAGAGAAGATCCAAGCTCTCTGGTGCCTCTAAACCTTCTATTGCAGCTTAG

mRNA sequence

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Protein sequence

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MVGHFLTALNACLRVGFGTVTLGLGLGMRSSISSALLANLLFCIHPEGAYTQSGKSLGRPRKYPSLSSSAAFIPGVRTLFWGKGLGRPRKFPGLSSSCMVISRVRTLFWG
KGLGRPRKFPSLSSSCCVHPRGAYTLLGKRLGEAYEVPEPLFKLLCSSQGPNPPQKEPEQERHSSVAEKMKFNIANPTTGCQKKLEIDDDVKLRPFWDKRISQEVNGDAL
GEVSTPCFRGYGRRNGERRRKSVRGCILSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKLYSVNSFLLLSGWQAKIQRLITPLTLQRK
RGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSIAA

Spg013213 (gene) of Sponge gourd (cylindrica) v1 genome