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Spg013242 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013242
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein At2g35280-like
Genome locationscaffold1:20150452..20151170
RNA-Seq ExpressionSpg013242
SyntenySpg013242
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601104.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1564.79Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +A LK SA+KG+ EACYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

KAG7031905.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1564.79Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +A LK SA+KG+ EACYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

XP_023549398.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]5.0e-1564.79Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS LA LK SA+KG+ E CYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

XP_023549459.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]5.0e-1564.79Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS LA LK SA+KG+ E CYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

XP_023549584.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]2.9e-1564.79Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +A LK SA+KG+ EACYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

TrEMBL top hitse value%identityAlignment
A0A6J1GYN4 putative F-box protein At1g676232.1e-1460.56Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +A LK SA+KG+ +ACYVYG + Y++ +EDEGV+FLK CE KLG      R RVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

A0A6J1GZQ6 F-box protein At2g35280-like2.7e-1460.56Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +A LK SA+KG+ +ACYVYG + Y+  +EDEGV+FLK CE KLG      R RVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

A0A6J1H1G4 putative F-box protein At1g676234.1e-1563.38Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        M EFFTH +EAS +A LK SA+KG+ EACYVYG + Y+  LEDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

A0A6J1JRV1 putative F-box protein At1g676231.2e-1461.97Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +  LK SA+KG+ EACYVYG + Y+  +EDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

A0A6J1JRX4 putative F-box protein At1g676231.2e-1461.97Show/hide
Query:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL
        MLEFFTH +EAS +  LK SA+KG+ EACYVYG + Y+  +EDEGV+FLK CE KLG      RRRVKEF+
Subjt:  MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGIS----RRRVKEFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATTCTTCACCCATCGTAAAGAAGCTTCTAGATTGGCGAATTTGAAAGCTTCCGCCGAGAAAGGCCATGTAGAAGCTTGTTATGTATATGGCGCCGTTTTTTA
TTCTGTAGGTTTGGAGGATGAGGGAGTAGAATTTTTGAAGAAGTGTGAGGGAAAATTGGGAATTAGTCGTCGAAGAGTTAAGGAATTTCTTGGTTCATCCAGTTTTCTTG
TCGGTTCGAAGGGTTTGGATGTGGTTCGAGGCTGTTTTGAGCTACTTCACGGCATAATAGGATTTTATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATTCTTCACCCATCGTAAAGAAGCTTCTAGATTGGCGAATTTGAAAGCTTCCGCCGAGAAAGGCCATGTAGAAGCTTGTTATGTATATGGCGCCGTTTTTTA
TTCTGTAGGTTTGGAGGATGAGGGAGTAGAATTTTTGAAGAAGTGTGAGGGAAAATTGGGAATTAGTCGTCGAAGAGTTAAGGAATTTCTTGGTTCATCCAGTTTTCTTG
TCGGTTCGAAGGGTTTGGATGTGGTTCGAGGCTGTTTTGAGCTACTTCACGGCATAATAGGATTTTATAGATAA
Protein sequenceShow/hide protein sequence
MLEFFTHRKEASRLANLKASAEKGHVEACYVYGAVFYSVGLEDEGVEFLKKCEGKLGISRRRVKEFLGSSSFLVGSKGLDVVRGCFELLHGIIGFYR