CuGenDBv2

Gene ID	Spg013268
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transmembrane protein
Genome location	scaffold1:5491037..5491899
RNA-Seq Expression	Spg013268
Synteny	Spg013268
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]

8.1e-83

87.29

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022133044.1 uncharacterized protein LOC111005736 [Momordica charantia]

2.2e-80

83.43

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME T+LHQ LASKPPLLTINPH FS ISQNQ+ FLSLR +Q L+I PINA G DGGDS PPQVP  +TPPETVEVRFRKRSRRRSKQESEDG A GNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S++ KKWEDMS+AEKA +LYMGEKGLLFWLNKFAYASIF+MIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]

5.2e-82

86.74

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN   
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]

8.9e-82

86.19

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+TSLH+FLAS+PPLLTI PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]

8.1e-83

87.29

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KME2 Uncharacterized protein

7.6e-79

83.43

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+ SLHQ LASKPPL TINP +FS  SQ QIFF +LRHQ+PLRIKPINATGTD GD+APPQVPPEITPPETVEVRFRKRSRRRSKQE EDG AMGNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA  E  S + KKWE+MS+AEK M++YMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A5A7SKL6 Putative transmembrane protein

3.8e-78

83.43

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+ SLHQ LASKPPL TINP +FS  SQ QIFF SLR Q+PLRIKPINAT TD GD+APPQVPPEITPPETVEVRFRKRSRRRSK+E EDG AMGNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA VE  S + KKWE+MS+ EKAM+LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1BUU3 uncharacterized protein LOC111005736

1.1e-80

83.43

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME T+LHQ LASKPPLLTINPH FS ISQNQ+ FLSLR +Q L+I PINA G DGGDS PPQVP  +TPPETVEVRFRKRSRRRSKQESEDG A GNGRP
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S++ KKWEDMS+AEKA +LYMGEKGLLFWLNKFAYASIF+MIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1GFF1 uncharacterized protein LOC111453672

2.5e-82

86.74

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        MEATSLH+FLASKPPLLTI+PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN   
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1IVM3 uncharacterized protein LOC111478809

4.3e-82

86.19

Show/hide

Query:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP
        ME+TSLH+FLAS+PPLLTI PH+FS  SQNQ+FFLSLRHQQPLRIKPINAT TD GDSAPPQVPP ITPPETV+VRFRKRSRRRSKQESEDG AMGN R 
Subjt:  MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRP

Query:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVE  S +PKKWE+M +AEKA +LYMGEKGLLFWLNKFAYASIFIMIGGWI+FRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G17972.1 unknown protein

1.5e-31

46.63

Show/hide

Query:  SLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPP-ETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKA
        SLH FLA    ++ +    ++       F L   +++ L I  +N+    GGD        +IT P + VE+RF++ SRR+ +   E+G   G G+  K 
Subjt:  SLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPP-ETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKA

Query:  PVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG
          ETV    K WE+M++ EKA++LY+GEKGLLFWLNK AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P +I KG
Subjt:  PVETVSDRPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCAACCAGTCTCCACCAATTTCTCGCTTCTAAACCACCGCTCTTAACAATTAATCCACATAGATTCTCGGCTATATCTCAGAATCAGATCTTCTTCCTATCTCT
ACGTCATCAACAGCCTCTCAGAATCAAACCGATCAACGCCACCGGCACCGACGGCGGCGACAGCGCGCCACCGCAGGTTCCGCCGGAAATAACGCCTCCGGAGACGGTTG
AAGTTCGGTTTCGGAAGAGGTCGAGGAGACGATCCAAGCAGGAGAGCGAGGATGGGCCGGCGATGGGGAATGGACGGCCGAGGAAGGCGCCGGTGGAGACTGTTTCCGAT
AGGCCGAAGAAATGGGAGGATATGAGCATGGCGGAGAAGGCAATGGATCTGTACATGGGGGAGAAGGGTTTATTGTTTTGGCTCAACAAGTTTGCTTATGCTTCCATTTT
TATCATGATTGGAGGTTGGATTCTGTTCCGATTTGTTGGTCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCCAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEATSLHQFLASKPPLLTINPHRFSAISQNQIFFLSLRHQQPLRIKPINATGTDGGDSAPPQVPPEITPPETVEVRFRKRSRRRSKQESEDGPAMGNGRPRKAPVETVSD
RPKKWEDMSMAEKAMDLYMGEKGLLFWLNKFAYASIFIMIGGWILFRFVGPSLNLYQLDTPPLSPTSIFKGQ

Spg013268 (gene) of Sponge gourd (cylindrica) v1 genome