CuGenDBv2

Gene ID	Spg013311
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box domain-containing protein
Genome location	scaffold1:20983472..20985031
RNA-Seq Expression	Spg013311
Synteny	Spg013311
Gene Ontology terms	GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR045118 - F-box only protein FBXO9/FBXO48

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449214.1 PREDICTED: probable F-box protein At5g04010 [Cucumis melo]

6.9e-113

77.54

Show/hide

Query:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
        P L  S PPWEV+LLVAERLDPK+LA+ASCVCKSWS+SMASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLF LG+ AAARR P   KPTLSLSD
Subjt:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD

Query:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR
        LVFVIS+SF TDKD          KEEKA   Q   TVVKHG E+ V+RNGLFKFDINL N+N    PVVIGAR+EV VVWN+VLEGWRGVF MIECGGR
Subjt:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR

Query:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        VGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC  G GGG NKVRIE+VSVGMMSVVSWRYVSLDDGL YLQHFLFN NV
Subjt:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

XP_022925168.1 probable F-box protein At5g04010 [Cucurbita moschata]

7.4e-115

77.86

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Query:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL
        Q PPS PPWEVLLLVAERLDP++LA+ASCVCKSWSISMAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLF LGHTAAARR P PSKP LSLSDL
Subjt:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL

Query:  VFVISVSFTTDK--------DARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVG
        VFVISVS  TDK          +KEEK + +P+FTVVKHGGE+AVDRN LFKFDIN+ N +     VVIGA +EV VVWNVVLEGWR VF MIECGGRVG
Subjt:  VFVISVSFTTDK--------DARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVG

Query:  MAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN
        MAPRADGWFSEELPAAGCCP  VSGG+VADLKLG+C+NGEGG  +KVRIE+VSVGMMSV+SWRYVSLDDGL YLQHFLFN
Subjt:  MAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN

XP_023518459.1 probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo]

2.3e-116

78.14

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Query:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL
        Q PPS PPWEVLLLVAERLDP++LA+ASCVCKSWSISMAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLF LGHTAAARR P PSKP L LSDL
Subjt:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL

Query:  VFVISVSFTTDKD-------ARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGM
        VFVISVS T   D       A+KEEK + +P+FTVVKHGGE+AVDRNGLFKFDIN+ N +     VVIGA +EV VVWNVVLEGWR VF MIECGGRVGM
Subjt:  VFVISVSFTTDKD-------ARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGM

Query:  APRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN
        APRADGWFSEELPAAGCCP  VSGG+VADLKLG+C+NGEGG  +KVRIE+VSVGMMSV+SWRYVSLDDGL YLQHFLFN
Subjt:  APRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN

XP_031740421.1 probable F-box protein At5g04010 [Cucumis sativus]

6.2e-114

77.19

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Query:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
        P L  S PPWEV+LLVAERLDPK+LA+ASCVCKSWS+SMASDHLWEPIFTANFPSL NLA  ++ ATSP VSFRRLF LG+ AAARR P  SKP+LSLSD
Subjt:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD

Query:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR
        LVFVIS+SF T+KD          KEEKA   Q   T+VKHG E+ VDRNGLFKFDINL N+N D  PVVIGAR+EV VVWN+VLEGWRGVF MIECGGR
Subjt:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR

Query:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        VGMAPRADGWFSEELPAAGCCPN VSGG+V DL+LGLC  G GGG NKVRIE+VSVGMMSVVSWRYVSLDDGL YLQHFLFN NV
Subjt:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

XP_038883618.1 probable F-box protein At5g04010 [Benincasa hispida]

7.1e-118

78.67

Show/hide

Query:  PQLP--PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSL
        P LP   S PPWEVLLLVAERLDPK+LA+ASCVCK WSISMASDHLWEPIFTANFPSLSNLA+SSSA TSPPVSFRRLF LGHTAAARR P PSKPTLSL
Subjt:  PQLP--PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSL

Query:  SDLVFVISVSFTTDKDAR-------KEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDR-NPVVIGARDEVVVVWNVVLEGWRGVFPMIECGG
        SDL+FVIS+S +TDKD         +++KA  Q I TVVKHGGE+AVDRNGLFKFDINL  DN ++  PVVIG R+EV VVWN+VLEGWRGVF MIECGG
Subjt:  SDLVFVISVSFTTDKDAR-------KEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDR-NPVVIGARDEVVVVWNVVLEGWRGVFPMIECGG

Query:  RVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        RVGMAPRADGWFSEELPAAGCC N VSGG+VADLKLGL   G  GG +KVRIE+VSVGMMS+VSWRYVSLDDGL YLQHFLFN +V
Subjt:  RVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDE5 F-box domain-containing protein

3.0e-114

77.19

Show/hide

Query:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
        P L  S PPWEV+LLVAERLDPK+LA+ASCVCKSWS+SMASDHLWEPIFTANFPSL NLA  ++ ATSP VSFRRLF LG+ AAARR P  SKP+LSLSD
Subjt:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD

Query:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR
        LVFVIS+SF T+KD          KEEKA   Q   T+VKHG E+ VDRNGLFKFDINL N+N D  PVVIGAR+EV VVWN+VLEGWRGVF MIECGGR
Subjt:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR

Query:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        VGMAPRADGWFSEELPAAGCCPN VSGG+V DL+LGLC  G GGG NKVRIE+VSVGMMSVVSWRYVSLDDGL YLQHFLFN NV
Subjt:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

A0A1S3BLJ1 probable F-box protein At5g04010

3.3e-113

77.54

Show/hide

Query:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
        P L  S PPWEV+LLVAERLDPK+LA+ASCVCKSWS+SMASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLF LG+ AAARR P   KPTLSLSD
Subjt:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD

Query:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR
        LVFVIS+SF TDKD          KEEKA   Q   TVVKHG E+ V+RNGLFKFDINL N+N    PVVIGAR+EV VVWN+VLEGWRGVF MIECGGR
Subjt:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR

Query:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        VGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC  G GGG NKVRIE+VSVGMMSVVSWRYVSLDDGL YLQHFLFN NV
Subjt:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

A0A5D3DEJ6 Putative F-box protein

3.3e-113

77.54

Show/hide

Query:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
        P L  S PPWEV+LLVAERLDPK+LA+ASCVCKSWS+SMASDHLWEPIFTANFPSL NLA  S+  +SPPVSFRRLF LG+ AAARR P   KPTLSLSD
Subjt:  PQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD

Query:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR
        LVFVIS+SF TDKD          KEEKA   Q   TVVKHG E+ V+RNGLFKFDINL N+N    PVVIGAR+EV VVWN+VLEGWRGVF MIECGGR
Subjt:  LVFVISVSFTTDKD--------ARKEEKA-LFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGR

Query:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV
        VGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC  G GGG NKVRIE+VSVGMMSVVSWRYVSLDDGL YLQHFLFN NV
Subjt:  VGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

A0A6J1EEG3 probable F-box protein At5g04010

3.6e-115

77.86

Show/hide

Query:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL
        Q PPS PPWEVLLLVAERLDP++LA+ASCVCKSWSISMAS++LWEPIF+A FPSL+NLA +SSA TSPPVSFRRLF LGHTAAARR P PSKP LSLSDL
Subjt:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL

Query:  VFVISVSFTTDK--------DARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVG
        VFVISVS  TDK          +KEEK + +P+FTVVKHGGE+AVDRN LFKFDIN+ N +     VVIGA +EV VVWNVVLEGWR VF MIECGGRVG
Subjt:  VFVISVSFTTDK--------DARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVG

Query:  MAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN
        MAPRADGWFSEELPAAGCCP  VSGG+VADLKLG+C+NGEGG  +KVRIE+VSVGMMSV+SWRYVSLDDGL YLQHFLFN
Subjt:  MAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN

A0A6J1HMX9 probable F-box protein At5g04010

1.7e-112

75.63

Show/hide

Query:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL
        Q PPS PPWEVLLLVAERLDP++LA+ASCVCKSWSISMAS+HLWEPIF+A FPSL+NLA +SSA  SPP+SF RLF LGHTAAARR P PSKP LSLSDL
Subjt:  QLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSDL

Query:  VFVISVSFTTDKD-------ARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGM
        +FVISVS T   D       A KEEK + + +FT+VKHGGE+ VDRNGLFKFDIN+   +     VVIGA  EV VVWNVVLEGWR VF MIECGGRVGM
Subjt:  VFVISVSFTTDKD-------ARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGM

Query:  APRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN
        APRADGWFSEELPAAGCCP  VSGG+VADLKLG+C+NGEGG  ++VRIE+VSVGMMSV+SWRYVSLDDGL YLQHFLFN
Subjt:  APRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFN

SwissProt top hits

e value

%identity

Alignment

Q5EAF6 Probable F-box protein At5g04010

1.5e-22

31.48

Show/hide

Query:  PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAA-ARRHPTPSKPTLSLSDLVF
        PS P WE+L LV   +DP+SLA ASCV  +WS   +S+ LW+ +  A   S+   A++   A    +S++RL S   +AA  RR+  P++P +SLSDLVF
Subjt:  PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAA-ARRHPTPSKPTLSLSDLVF

Query:  VISVSFTTDKDARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGMAPRADGWFS
        ++ VS    K+A             VVK G ++    N  F+ + ++      R+        +V + WNVVL  +  +F M E    +       GWF+
Subjt:  VISVSFTTDKDARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGMAPRADGWFS

Query:  EELPAAGCCPNAVSGG--VVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFL
        +ELP      N    G  +V ++K            N+  ++ V   +    +W+ + +DD LRYLQ FL
Subjt:  EELPAAGCCPNAVSGG--VVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFL

Arabidopsis top hits

e value

%identity

Alignment

AT5G04010.1 F-box family protein

1.1e-23

31.48

Show/hide

Query:  PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAA-ARRHPTPSKPTLSLSDLVF
        PS P WE+L LV   +DP+SLA ASCV  +WS   +S+ LW+ +  A   S+   A++   A    +S++RL S   +AA  RR+  P++P +SLSDLVF
Subjt:  PSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAA-ARRHPTPSKPTLSLSDLVF

Query:  VISVSFTTDKDARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGMAPRADGWFS
        ++ VS    K+A             VVK G ++    N  F+ + ++      R+        +V + WNVVL  +  +F M E    +       GWF+
Subjt:  VISVSFTTDKDARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGMAPRADGWFS

Query:  EELPAAGCCPNAVSGG--VVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFL
        +ELP      N    G  +V ++K            N+  ++ V   +    +W+ + +DD LRYLQ FL
Subjt:  EELPAAGCCPNAVSGG--VVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFL

AT5G48170.1 F-box family protein

9.6e-04

40.35

Show/hide

Query:  EVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIF---TANFPSLSNLAVSSS
        +VL+ +  RLD  SL SA+CVC+ WS    +D +WE +     +  PSLS  +V S+
Subjt:  EVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIF---TANFPSLSNLAVSSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTCTCTTCAATCTCCTTCTTCGCCGCCACAGCTGCCGCCATCTTCGCCGCCGTGGGAGGTGCTTCTTCTCGTCGCCGAACGTCTCGACCCAAAGTCCCTCGCCTC
CGCCTCATGCGTCTGCAAATCCTGGTCCATTTCCATGGCCTCCGACCACCTTTGGGAGCCCATTTTCACCGCCAATTTTCCTTCTCTCTCTAACCTCGCCGTCTCCTCCT
CCGCCGCCACGTCACCACCTGTGTCCTTCCGCCGCCTCTTCAGCCTCGGCCATACCGCCGCCGCCCGTCGCCATCCCACTCCCTCAAAACCCACCCTCTCCCTCTCCGAC
CTTGTCTTCGTCATCAGCGTCTCTTTCACCACCGACAAAGATGCGAGGAAGGAAGAAAAGGCTCTGTTTCAACCCATCTTCACCGTTGTGAAGCACGGTGGTGAGATGGC
TGTGGACCGAAATGGGCTATTCAAATTCGACATAAATCTCATGAACGACAACCCCGATCGTAATCCGGTGGTGATCGGGGCGAGAGACGAGGTGGTGGTGGTGTGGAATG
TGGTGTTGGAAGGGTGGAGAGGAGTCTTTCCAATGATAGAATGTGGAGGAAGAGTTGGAATGGCTCCGAGAGCTGATGGTTGGTTCTCGGAGGAGCTGCCCGCGGCAGGG
TGCTGCCCGAACGCCGTGAGCGGCGGCGTAGTGGCGGATCTGAAACTGGGGCTGTGTAGAAATGGAGAAGGGGGTGGAGAGAATAAGGTTAGGATTGAAAATGTGAGTGT
AGGAATGATGAGTGTTGTGAGTTGGAGATATGTGAGTTTGGATGATGGGTTGAGGTATTTGCAGCATTTTTTGTTCAATGGAAATGTTTAA

mRNA sequence

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Protein sequence

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MASLQSPSSPPQLPPSSPPWEVLLLVAERLDPKSLASASCVCKSWSISMASDHLWEPIFTANFPSLSNLAVSSSAATSPPVSFRRLFSLGHTAAARRHPTPSKPTLSLSD
LVFVISVSFTTDKDARKEEKALFQPIFTVVKHGGEMAVDRNGLFKFDINLMNDNPDRNPVVIGARDEVVVVWNVVLEGWRGVFPMIECGGRVGMAPRADGWFSEELPAAG
CCPNAVSGGVVADLKLGLCRNGEGGGENKVRIENVSVGMMSVVSWRYVSLDDGLRYLQHFLFNGNV

Spg013311 (gene) of Sponge gourd (cylindrica) v1 genome