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Spg013410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold1:11599339..11600192
RNA-Seq ExpressionSpg013410
SyntenySpg013410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027182.1 hypothetical protein SDJN02_11193, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2073.33Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQART-------------KARADFVRERLRKRHHD
        MG WLNPLPRGQL TSAC+FVAG SFFAVGAYLS+VNIGPQQART             KAR+DFVRERLR+RHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQART-------------KARADFVRERLRKRHHD

XP_022132375.1 uncharacterized protein LOC111005249 [Momordica charantia]1.3e-2288.71Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MGLWL+PLPRGQLATSACFFVAGVSFFAVGAY S++NI PQQARTKAR DFV+ERLRKRHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

XP_022962859.1 uncharacterized protein LOC111463226 [Cucurbita moschata]2.9e-2287.1Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MG WLNPLPRGQL TSAC+FVAG S FAVGAYLS+VNIGPQQARTKAR+DFVRERLR+RHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

XP_023517718.1 uncharacterized protein LOC111781390 [Cucurbita pepo subsp. pepo]4.5e-2387.1Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MGLWLNPLPRGQL TSAC+FVAG SFF VGAYLS+VN+GPQQARTKAR+DFVRERLR+RHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

XP_038880929.1 uncharacterized protein LOC120072605 [Benincasa hispida]1.6e-2391.94Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MGLWLNPLPRGQLATSACFFVAGVSFFA GAYLSF+NI PQQARTKAR DFV+ERLRKRHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

TrEMBL top hitse value%identityAlignment
A0A0A0KEZ9 Uncharacterized protein1.5e-1674.58Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKR
        MGLWLNPLP GQL  SAC F+ G+S FA GA+LS++NIGPQQARTKAR DFV+ERLR+R
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKR

A0A1S4E3S6 uncharacterized protein LOC1035009181.7e-2085Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRH
        MGLWLNPLPRGQL TSACFF+ GVS FA GA+LS++NIGPQQARTKAR DFVRERLRKRH
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRH

A0A5D3C6A0 Uncharacterized protein1.7e-2085Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRH
        MGLWLNPLPRGQL TSACFF+ GVS FA GA+LS++NIGPQQARTKAR DFVRERLRKRH
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRH

A0A6J1BSA7 uncharacterized protein LOC1110052496.4e-2388.71Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MGLWL+PLPRGQLATSACFFVAGVSFFAVGAY S++NI PQQARTKAR DFV+ERLRKRHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

A0A6J1HI96 uncharacterized protein LOC1114632261.4e-2287.1Show/hide
Query:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD
        MG WLNPLPRGQL TSAC+FVAG S FAVGAYLS+VNIGPQQARTKAR+DFVRERLR+RHHD
Subjt:  MGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRKRHHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11591.1 unknown protein2.5e-1163.46Show/hide
Query:  PLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRK
        P  R QL  S  FF AGVS F  GAYLS  NI PQQAR KAR DFV++R+RK
Subjt:  PLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTAGATTTCAGAGAGATGTTCAAGAAGTTCCTCAATATTATATTGATATCCTCTGGCCTCTTGGTCGAGGATACATGTCAATTACCACTGAACTATGCTTGCTTTGGCT
AGACGTTACTGGCGGTGATGAAATTGTTTTGGCGCAATTTCAGTGGCAAATGGGACTGTGGCTGAACCCTCTCCCGCGCGGGCAGCTAGCAACTAGCGCCTGCTTCTTCG
TCGCCGGAGTCTCCTTCTTCGCCGTCGGAGCTTACCTCTCTTTCGTCAACATCGGCCCTCAGCAAGCTCGAACCAAAGCTCGTGCCGATTTTGTCAGGGAGCGGTTGAGA
AAGCGTCACCACGATTAA
mRNA sequenceShow/hide mRNA sequence
CTTAGATTTCAGAGAGATGTTCAAGAAGTTCCTCAATATTATATTGATATCCTCTGGCCTCTTGGTCGAGGATACATGTCAATTACCACTGAACTATGCTTGCTTTGGCT
AGACGTTACTGGCGGTGATGAAATTGTTTTGGCGCAATTTCAGTGGCAAATGGGACTGTGGCTGAACCCTCTCCCGCGCGGGCAGCTAGCAACTAGCGCCTGCTTCTTCG
TCGCCGGAGTCTCCTTCTTCGCCGTCGGAGCTTACCTCTCTTTCGTCAACATCGGCCCTCAGCAAGCTCGAACCAAAGCTCGTGCCGATTTTGTCAGGGAGCGGTTGAGA
AAGCGTCACCACGATTAA
Protein sequenceShow/hide protein sequence
LRFQRDVQEVPQYYIDILWPLGRGYMSITTELCLLWLDVTGGDEIVLAQFQWQMGLWLNPLPRGQLATSACFFVAGVSFFAVGAYLSFVNIGPQQARTKARADFVRERLR
KRHHD