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Spg013418 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013418
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold1:21863986..21866801
RNA-Seq ExpressionSpg013418
SyntenySpg013418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.3e-1430.77Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP
        ++M W       A+ P     D D+  +Y++WY+NI++ +IT+ GA+    +LN+CN  +  ME +HYMY++PI P P  RRR    VQE D L + D  
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP

Query:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQY
          E++P     P+ +    H +++     PV    P      +   V     F   +   +AG S+        ++D  + PSSS  H  GRGRGEH +Y
Subjt:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQY

Query:  VY---PTELVEEPREEESPDD
        +Y   P  + E+  E +  ++
Subjt:  VY---PTELVEEPREEESPDD

KAA0046268.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.0e-1231Show/hide
Query:  MIMNWLVDHAVLASS-PIDA-DGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP
        ++M W       A+  PI+  D ++  +Y+ WY+NI++ +IT+ GA+    +L +CN  +  ME +HYMY++PI P P  RRR    VQE D L + D  
Subjt:  MIMNWLVDHAVLASS-PIDA-DGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP

Query:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQYVY
         +E  P+       E   V P + +        ++   V +     +E      +   +AG S+        ++D  + PSSS  H  GRGRGEH +Y+Y
Subjt:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQYVY

KAA0047926.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.0e-1230.51Show/hide
Query:  SQQWLLNVATSMIMNWLVDHAVLASSPIDADGDM--APDYMDWYENITRRFITREGASYG--------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPR
        S  W   VA  ++M W        + P     DM    +Y+ WY+NIT+ +IT+ GA+          Q +LN+CN  +  ME +HYMY++PI P    R
Subjt:  SQQWLLNVATSMIMNWLVDHAVLASSPIDADGDM--APDYMDWYENITRRFITREGASYG--------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPR

Query:  RRRGARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAG
        RR    VQE D L + D  V+E  PV   +   +   V P + +          P      +   V     F   +   +AG S+        ++D  + 
Subjt:  RRRGARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAG

Query:  PSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE
        PSSS  H  GRGRGEH +Y+Y   P  ++E+  E++
Subjt:  PSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE

KAA0050408.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-1230.67Show/hide
Query:  MIMNWLVDHAVLASSPI--DADGDMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M WL      A+ P+    D D+  +Y+ WY+NITR +IT+ GA  G                Q ILN+CN  +  ME +HYMY++PI     P +RR
Subjt:  MIMNWLVDHAVLASSPI--DADGDMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPS-------WHDYE
         A VQ+ D L + D  V+E       +P+          T  EH  V    P ++   F     D+        D G+        PS       ++D  
Subjt:  GARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPS-------WHDYE

Query:  AGPSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE
        + PSSS  H  GRG GEH +Y+Y   P  + E+  E++
Subjt:  AGPSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE

KAA0062960.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.0e-1241.07Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYG-----QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLV
        ++M WL     +A+ P     D D+  +Y+ WY+NI R +IT  G+  G     Q +LN+CN  +  ME +HYMY++PI P P  RRR  A VQE D L 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYG-----QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLV

Query:  QEDIPVQEDIPV
        + D  V+E +PV
Subjt:  QEDIPVQEDIPV

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein3.5e-1430.77Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP
        ++M W       A+ P     D D+  +Y++WY+NI++ +IT+ GA+    +LN+CN  +  ME +HYMY++PI P P  RRR    VQE D L + D  
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP

Query:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQY
          E++P     P+ +    H +++     PV    P      +   V     F   +   +AG S+        ++D  + PSSS  H  GRGRGEH +Y
Subjt:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQY

Query:  VY---PTELVEEPREEESPDD
        +Y   P  + E+  E +  ++
Subjt:  VY---PTELVEEPREEESPDD

A0A5A7TTS7 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-1231Show/hide
Query:  MIMNWLVDHAVLASS-PIDA-DGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP
        ++M W       A+  PI+  D ++  +Y+ WY+NI++ +IT+ GA+    +L +CN  +  ME +HYMY++PI P P  RRR    VQE D L + D  
Subjt:  MIMNWLVDHAVLASS-PIDA-DGDMAPDYMDWYENITRRFITREGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIP

Query:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQYVY
         +E  P+       E   V P + +        ++   V +     +E      +   +AG S+        ++D  + PSSS  H  GRGRGEH +Y+Y
Subjt:  VQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQYVY

A0A5A7U115 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-1230.51Show/hide
Query:  SQQWLLNVATSMIMNWLVDHAVLASSPIDADGDM--APDYMDWYENITRRFITREGASYG--------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPR
        S  W   VA  ++M W        + P     DM    +Y+ WY+NIT+ +IT+ GA+          Q +LN+CN  +  ME +HYMY++PI P    R
Subjt:  SQQWLLNVATSMIMNWLVDHAVLASSPIDADGDM--APDYMDWYENITRRFITREGASYG--------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPR

Query:  RRRGARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAG
        RR    VQE D L + D  V+E  PV   +   +   V P + +          P      +   V     F   +   +AG S+        ++D  + 
Subjt:  RRRGARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPF--THMQDDAGSSTPVMTIPPSWHDYEAG

Query:  PSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE
        PSSS  H  GRGRGEH +Y+Y   P  ++E+  E++
Subjt:  PSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-1230.67Show/hide
Query:  MIMNWLVDHAVLASSPI--DADGDMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M WL      A+ P+    D D+  +Y+ WY+NITR +IT+ GA  G                Q ILN+CN  +  ME +HYMY++PI     P +RR
Subjt:  MIMNWLVDHAVLASSPI--DADGDMAPDYMDWYENITRRFITREGASYG----------------QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPS-------WHDYE
         A VQ+ D L + D  V+E       +P+          T  EH  V    P ++   F     D+        D G+        PS       ++D  
Subjt:  GARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPPFTHMQDDAGSSTPVMTIPPS-------WHDYE

Query:  AGPSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE
        + PSSS  H  GRG GEH +Y+Y   P  + E+  E++
Subjt:  AGPSSSSAHERGRGRGEHAQYVY---PTELVEEPREEE

A0A5A7V6U3 Serine/threonine-protein phosphatase 7 long form-like protein1.9e-1241.07Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYG-----QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLV
        ++M WL     +A+ P     D D+  +Y+ WY+NI R +IT  G+  G     Q +LN+CN  +  ME +HYMY++PI P P  RRR  A VQE D L 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYG-----QAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLV

Query:  QEDIPVQEDIPV
        + D  V+E +PV
Subjt:  QEDIPVQEDIPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTGCTCACGCGTCAACATGAATTATGAAGATTACATTGAGGAAACCTATAAGCTTTCGACATGTGAGGAATGGTCCAGATTAAGTTTGCCTTGGTTAGCAGC
TCAATTTCCAAGATTGGATGACAATGCTGATGACATAGCAGTGGAGAGCTTTGGGGTTGGGAACGATTCCCAACAATGGCTCCTCAACGTCGCCACATCAATGATCATGA
ATTGGTTGGTCGACCATGCGGTGCTCGCAAGTTCTCCAATAGATGCTGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACT
CGCGAGGGAGCCTCATATGGTCAAGCGATATTAAATTTGTGCAACAGTGGTGATGCCAATATGGAACAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGG
ACCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGAGGATGTTCTAGTACAAGAGGATATTCCGGTTCAAGAGGATATTCCAGTACAACCTTATATTCCAGTATATGAGG
ATGTTCCAGTACATCCTCATATTACAGTACAAGAGCATATTCCAGTCCAGGAGCATTTCCCACCAGTTGTACGGGAAGAATTTCACCACAATGTTGAAGACATGCCTCCT
TTTACTCATATGCAGGATGATGCTGGTTCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCGTCATCGTCATCTGCTCACGAACGTGG
TCGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGAGTCCAGATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTGCTCACGCGTCAACATGAATTATGAAGATTACATTGAGGAAACCTATAAGCTTTCGACATGTGAGGAATGGTCCAGATTAAGTTTGCCTTGGTTAGCAGC
TCAATTTCCAAGATTGGATGACAATGCTGATGACATAGCAGTGGAGAGCTTTGGGGTTGGGAACGATTCCCAACAATGGCTCCTCAACGTCGCCACATCAATGATCATGA
ATTGGTTGGTCGACCATGCGGTGCTCGCAAGTTCTCCAATAGATGCTGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACT
CGCGAGGGAGCCTCATATGGTCAAGCGATATTAAATTTGTGCAACAGTGGTGATGCCAATATGGAACAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGG
ACCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGAGGATGTTCTAGTACAAGAGGATATTCCGGTTCAAGAGGATATTCCAGTACAACCTTATATTCCAGTATATGAGG
ATGTTCCAGTACATCCTCATATTACAGTACAAGAGCATATTCCAGTCCAGGAGCATTTCCCACCAGTTGTACGGGAAGAATTTCACCACAATGTTGAAGACATGCCTCCT
TTTACTCATATGCAGGATGATGCTGGTTCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCGTCATCGTCATCTGCTCACGAACGTGG
TCGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGAGTCCAGATGATTAG
Protein sequenceShow/hide protein sequence
MAVCSRVNMNYEDYIEETYKLSTCEEWSRLSLPWLAAQFPRLDDNADDIAVESFGVGNDSQQWLLNVATSMIMNWLVDHAVLASSPIDADGDMAPDYMDWYENITRRFIT
REGASYGQAILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGARVQEEDVLVQEDIPVQEDIPVQPYIPVYEDVPVHPHITVQEHIPVQEHFPPVVREEFHHNVEDMPP
FTHMQDDAGSSTPVMTIPPSWHDYEAGPSSSSAHERGRGRGEHAQYVYPTELVEEPREEESPDD