CuGenDBv2

Gene ID	Spg013472
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Homeobox domain-containing protein
Genome location	scaffold1:5127653..5128240
RNA-Seq Expression	Spg013472
Synteny	Spg013472
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7031308.1 Homeobox-leucine zipper protein ATHB-6 [Cucurbita argyrosperma subsp. argyrosperma]

4.8e-65

77.3

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNSESNLS+EEE  VPADSEN+LIEQ+KP I DQFSVP A+ESQDFNY S +NNGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYR-QTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI SP VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY+ QTQMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYR-QTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

XP_022941752.1 homeobox-leucine zipper protein ATHB-6-like [Cucurbita moschata]

2.4e-64

76.76

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNSESNLS+EEE  VPADSEN+LIEQ+KP I DQFSVP A+ESQDFNY S +NNGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI SP VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY +Q+QMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

XP_022999792.1 homeobox-leucine zipper protein ATHB-6-like [Cucurbita maxima]

6.2e-65

77.3

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNS+SNLS+EEEM VPADSEN+LIEQ+KP I DQFSVP A+ESQDFNYES +NNGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI S  VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY +QTQMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

XP_023547219.1 homeobox-leucine zipper protein ATHB-6-like [Cucurbita pepo subsp. pepo]

1.6e-65

77.3

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNSESNLS+EEEM VPADSEN+LIEQ+KP I DQFSVP A+E+QDFNYES ++NGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI SP VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY +QTQMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

XP_038905018.1 homeobox-leucine zipper protein ATHB-6-like [Benincasa hispida]

1.6e-68

80.65

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGI-ADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNED
        QIRELK KLQEDNSESNLS+EEEMVV A+SEN+ IEQ KP I  DQFSVPPASESQDFNYESFN+NGGEGEEAP EEA+LF DFKDGSSDSDSSAILNED
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGI-ADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNED

Query:  YSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
        YSPTA I SPGVLQNH  +H MT A  SP PSAAVKLN       YLQ+QKGY +QTQMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  YSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C6W4 homeobox-leucine zipper protein ATHB-6-like

2.6e-64

75.81

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Query:  QIRELKPKLQEDNSESNLSMEEEMVV-PADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNED
        +IRELK KLQEDNSESN+S+EEEMV+  ADSEN+LIE+ +P   D FSVPPA+E +D NYESFNNNGGEGEE PTEEASLF DFKDGSSDSDSSAILNED
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVV-PADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNED

Query:  YSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYRQTQMFPEMEEHNFFSGEE-ACNFFSDEQAPTL
        YS TAAI SPGVLQN  H+HFM AASPSPSPSAAVK N  T  L+Y Q+QK Y+QTQ++P+MEEHNFF+GEE  CNFFS+EQAP+L
Subjt:  YSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYRQTQMFPEMEEHNFFSGEE-ACNFFSDEQAPTL

A0A6J1ENE6 homeobox-leucine zipper protein ATHB-6-like

1.3e-52

67.55

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +IRELK K+QEDNS        EM+VPADSEN+LIEQ KP I D FSVPPA         SFNNNGGEG+E PT         KDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPS---AAVKLNFVTTTLSYLQYQKGYRQTQ-MFPEMEEHNFFSGEEACNFFSDEQAPTL
        SPTA + SPGVLQN  ++HFMT A P  SPS   A VKLN  TT L+YLQ+QKGY+QTQ MFP+MEEHNFF GEEACNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPS---AAVKLNFVTTTLSYLQYQKGYRQTQ-MFPEMEEHNFFSGEEACNFFSDEQAPTL

A0A6J1FNC9 homeobox-leucine zipper protein ATHB-6-like

1.1e-64

76.76

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNSESNLS+EEE  VPADSEN+LIEQ+KP I DQFSVP A+ESQDFNY S +NNGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI SP VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY +Q+QMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

A0A6J1JAW1 homeobox-leucine zipper protein ATHB-6-like

1.1e-51

66.49

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +IRELK K+QEDNS        EM+ PADSEN+LIEQ KP I D FSVPPA         SFNNNGGEG+E PT         KDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPS---AAVKLNFVTTTLSYLQYQKGYRQTQ-MFPEMEEHNFFSGEEACNFFSDEQAPTL
        SPTA + SPGVLQN  ++HFMT   P  SPS   A VKLN  TT L+YLQ+QKGY+QTQ MFP+MEEHNFF GEEACNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPS---AAVKLNFVTTTLSYLQYQKGYRQTQ-MFPEMEEHNFFSGEEACNFFSDEQAPTL

A0A6J1KBS4 homeobox-leucine zipper protein ATHB-6-like

3.0e-65

77.3

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Query:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY
        +I+ELK KLQEDNS+SNLS+EEEM VPADSEN+LIEQ+KP I DQFSVP A+ESQDFNYES +NNGGEG     EE SLF DFKDGSSDSDSSAILNEDY
Subjt:  QIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNEDY

Query:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
         PT AI S  VLQ H+H HFMT A+ SPSPS  VKLN  TT L+YLQYQKGY +QTQMFP+MEEHNFFSGEE CNFFSDEQAPTL
Subjt:  SPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGY-RQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G22430.1 homeobox protein 6

6.5e-04

31.09

Show/hide

Query:  QIRELKPKL-----QEDNSESNLSMEEEMVVPA-DSENSLIEQVKPGIADQFSVPP--ASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSD-SD
        +I +LK KL     +E+  E+N ++  E  +   + E SL E+    I +  S PP     S   NY SF +     +  P + A+       GSSD SD
Subjt:  QIRELKPKL-----QEDNSESNLSMEEEMVVPA-DSENSLIEQVKPGIADQFSVPP--ASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSD-SD

Query:  SSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYRQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL
        SSA+LNE+ S                   +T A+P   P             ++ Q+ K   QT+     +  +F SGEEAC FFSDEQ P+L
Subjt:  SSAILNEDYSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYRQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

Sequences

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CDS sequence

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ATGACATTGATGGAGACTGTAAAATTCTGTTTGCAGATTCGGGAACTGAAACCGAAGCTTCAAGAAGATAACTCAGAGAGCAATCTTTCGATGGAGGAAGAGATGGTGGT
GCCGGCCGATTCTGAGAATTCTCTGATTGAACAAGTAAAGCCGGGAATTGCCGATCAGTTCTCTGTTCCTCCGGCGAGTGAATCCCAAGACTTCAATTACGAGAGCTTCA
ACAACAATGGCGGAGAAGGGGAAGAGGCGCCGACGGAAGAGGCGTCATTGTTCCGCGATTTCAAAGATGGGTCATCCGATAGCGATTCGAGCGCAATTTTGAACGAAGAT
TACAGCCCCACGGCGGCCATTTATTCACCAGGGGTGCTGCAGAACCACCACCATCACCACTTCATGACGGCGGCATCTCCGTCTCCGTCTCCGTCCGCCGCCGTGAAACT
GAACTTCGTAACGACGACGCTGAGTTACTTGCAGTATCAGAAGGGGTATCGACAAACCCAGATGTTTCCGGAAATGGAGGAGCATAATTTCTTCAGCGGAGAGGAGGCTT
GTAACTTCTTCTCCGATGAGCAAGCTCCGACTCTGTAG

mRNA sequence

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Protein sequence

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MTLMETVKFCLQIRELKPKLQEDNSESNLSMEEEMVVPADSENSLIEQVKPGIADQFSVPPASESQDFNYESFNNNGGEGEEAPTEEASLFRDFKDGSSDSDSSAILNED
YSPTAAIYSPGVLQNHHHHHFMTAASPSPSPSAAVKLNFVTTTLSYLQYQKGYRQTQMFPEMEEHNFFSGEEACNFFSDEQAPTL

Spg013472 (gene) of Sponge gourd (cylindrica) v1 genome