; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013481 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013481
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal protein L11
Genome locationscaffold1:4740189..4741166
RNA-Seq ExpressionSpg013481
SyntenySpg013481
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034038.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7696.69Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        PGHVVASTL++KH+Y+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIK V
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

XP_004142176.1 54S ribosomal protein L19, mitochondrial [Cucumis sativus]1.6e-7697.99Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

XP_008449842.1 PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo]1.2e-7697.99Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

XP_022132985.1 54S ribosomal protein L19, mitochondrial [Momordica charantia]7.1e-7797.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        PGHVVASTLSLKH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK V
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

XP_038901904.1 54S ribosomal protein L19, mitochondrial [Benincasa hispida]3.2e-7798.01Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK V
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

TrEMBL top hitse value%identityAlignment
A0A0A0KWT6 Uncharacterized protein7.6e-7797.99Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

A0A1S3BMZ5 54S ribosomal protein L19, mitochondrial5.8e-7797.99Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

A0A5A7T9U7 54S ribosomal protein L195.8e-7797.99Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

A0A6J1BU21 54S ribosomal protein L19, mitochondrial3.4e-7797.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        PGHVVASTLSLKH+YEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK V
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like1.0e-7696.69Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        PGHVVASTL+LKH+Y+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIK V
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

SwissProt top hitse value%identityAlignment
O67758 50S ribosomal protein L112.8e-2846.76Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V ATI L +PA  A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT ++D +F F +K+P V++ LKKAAG+E GSS P  V    ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
        +K + EIAK+K  D       L++  +++ GTA SMGI+
Subjt:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

Q07KJ7 50S ribosomal protein L119.7e-2946.76Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALGQ  LN+M FCK+FNA+TQK + +TP+ V IT + D +F F +K+P ++++LK+AA I+SGS  PG  VA  +S
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
           V EIA+ K  D  C    +ES  + + G+A SMG++
Subjt:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

Q2RQU9 50S ribosomal protein L112.8e-2845.39Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQ  +P  P+ V ITA+ D TF +  K+P +T++LKKAAGI  GS+ PG   A T++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        ++ V +IA+ K  D       +E+  + ++G+A SMG++ V
Subjt:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

Q3SSY4 50S ribosomal protein L113.7e-2846.04Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALGQ  LN+M FCK FNA+TQK + +TP+ V IT + D +F F +K+P + ++LK+AA I+SGS  PG   A TL+
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK
           V EIA+ K  D  C    +E+    + G+A SMG++
Subjt:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIK

Q9UTK2 54S ribosomal protein L19, mitochondrial5.9e-3451.85Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYE
        I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   +E GSS P H +   LSLKH+YE
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYE

Query:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        IAK+K +DP  Q + L S+CKS+IGTA SMG+K V
Subjt:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l119.0e-2243.48Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG+E GS  P       ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGI
        +  +  IA  K  D  C    +ES  + I GTA +MGI
Subjt:  LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGI

AT4G35490.1 mitochondrial ribosomal protein L117.3e-7286.67Show/hide
Query:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP
        A  KEIL RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RP
Subjt:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP

Query:  GHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV
        GH+  +TLS++HVYEIAKVKQ+DP+CQYMPLESICKSIIGTANSMGIK V
Subjt:  GHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPV

AT5G51610.1 Ribosomal protein L11 family protein1.1e-0635.06Show/hide
Query:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGI
        D +F F +K+P  ++ L KAAG++ GS  P  +    +++  V +IA+VK  +  C    + S  ++I GTA +MGI
Subjt:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGAAAGAGATCCTAACCAGGCGACCCGTCGCTGCCACCATCAGGCTCACCGTGCCTGCCGGCGGAGCTCGCCCAGCGCCACCGGTGGGGCCGGCGCTCGG
TCAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGACTTCAATGCCCGGACTCAAAAGTACAAACCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CCTTTGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGAGTCTGGCAGCAGCCGCCCAGGCCATGTGGTAGCCTCCACGCTCTCC
CTCAAGCACGTTTACGAGATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCACTAGAGTCTATTTGTAAGTCCATTATCGGCACTGCCAACAGCATGGG
AATTAAGCCGGTTATTAGCTCCTCCCAATTTGATATTTCTGGTGCAAAATTCCTGAATTTGATTAACTTTGTGAAACTGTGCTTCATTGTCATGTTAAAGAGTAGGTCTG
GTTCATCATTCACCTGCCCATTTCCTGTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGAAAGAGATCCTAACCAGGCGACCCGTCGCTGCCACCATCAGGCTCACCGTGCCTGCCGGCGGAGCTCGCCCAGCGCCACCGGTGGGGCCGGCGCTCGG
TCAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGACTTCAATGCCCGGACTCAAAAGTACAAACCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CCTTTGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGAGTCTGGCAGCAGCCGCCCAGGCCATGTGGTAGCCTCCACGCTCTCC
CTCAAGCACGTTTACGAGATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCACTAGAGTCTATTTGTAAGTCCATTATCGGCACTGCCAACAGCATGGG
AATTAAGCCGGTTATTAGCTCCTCCCAATTTGATATTTCTGGTGCAAAATTCCTGAATTTGATTAACTTTGTGAAACTGTGCTTCATTGTCATGTTAAAGAGTAGGTCTG
GTTCATCATTCACCTGCCCATTTCCTGTTGATTAG
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
LKHVYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKPVISSSQFDISGAKFLNLINFVKLCFIVMLKSRSGSSFTCPFPVD