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Spg013556 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013556
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalpain-type cysteine protease DEK1
Genome locationscaffold1:18401947..18403968
RNA-Seq ExpressionSpg013556
SyntenySpg013556
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK15.5e-0446.77Show/hide
Query:  FPFVFH----EKPSVSDVFFQSGSYPLFSFGFRRALSDREMTDVMALLSLIEEFEFENGRRD
        FP ++H    +   ++D    +G+   FSFGFRRALSDRE ++V+AL+SL+E   F  GRRD
Subjt:  FPFVFH----EKPSVSDVFFQSGSYPLFSFGFRRALSDREMTDVMALLSLIEEFEFENGRRD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAGCTTAAACCTACTTCGGCTTGAGAAAAAGCAAGCCATTCTAGGCAACAACCTGACACAAAAGGAGGATAAAACTCTATACCAAGTCATTGACAATAACTCTGCTGA
AGTTGCTAGTGACCAGGACACTGGTTTATGGCAGGCGATTTTGCTAGCAACTTCTGGAGCCATACTATATGAATTTTTGGATGGCAAACTCCAAGTCAAAGGGACATCAA
CGGCCTTTTTCAGGAGTTCTTGGTGGGGCACCGTTTCAAGGAGAAGGAAATTCTCTGGACACTACTCATTAGAGTCTTCCTTTGGTGTATTTGGAGAGAAAGGAACAACA
GCATTTTCAACGACAAATTCCAATCTTTCCACAATGCTCACCTGGATAAGTGGGTGGGGATACGTTTCCTCGTCTTTTCCATTTGTCTTCCATGAGAAACCATCGGTGTC
TGATGTTTTCTTCCAGTCGGGGAGCTATCCCTTGTTTTCGTTTGGGTTCCGCCGCGCTTTGTCTGATAGGGAAATGACAGATGTCATGGCACTTCTTTCTTTGATTGAGG
AGTTTGAGTTCGAAAATGGGAGAAGAGATAGTAGGCCCGTTTTGTTGCATTCTTTGTCAAAAGGTGGAGGAAGATCTGGATCATGTGACTATGTGCGTCTTTTGTGGGGC
CTCTTCTTTGATGCATTTGGGAAGCAGGTGTTAAGTTACTCAATTTATAGGGAGTTGATCAAGGAGTTCCTCCTCATGAGGGGAGATTTTTGTGGCAAGTTGGGATGTGT
GCTTTGTTTTGGAGTATTTGGGGGGAAAGAAATAATAAAGTGCTTAGGGGGTTGGAGAGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
TACAGCTTAAACCTACTTCGGCTTGAGAAAAAGCAAGCCATTCTAGGCAACAACCTGACACAAAAGGAGGATAAAACTCTATACCAAGTCATTGACAATAACTCTGCTGA
AGTTGCTAGTGACCAGGACACTGGTTTATGGCAGGCGATTTTGCTAGCAACTTCTGGAGCCATACTATATGAATTTTTGGATGGCAAACTCCAAGTCAAAGGGACATCAA
CGGCCTTTTTCAGGAGTTCTTGGTGGGGCACCGTTTCAAGGAGAAGGAAATTCTCTGGACACTACTCATTAGAGTCTTCCTTTGGTGTATTTGGAGAGAAAGGAACAACA
GCATTTTCAACGACAAATTCCAATCTTTCCACAATGCTCACCTGGATAAGTGGGTGGGGATACGTTTCCTCGTCTTTTCCATTTGTCTTCCATGAGAAACCATCGGTGTC
TGATGTTTTCTTCCAGTCGGGGAGCTATCCCTTGTTTTCGTTTGGGTTCCGCCGCGCTTTGTCTGATAGGGAAATGACAGATGTCATGGCACTTCTTTCTTTGATTGAGG
AGTTTGAGTTCGAAAATGGGAGAAGAGATAGTAGGCCCGTTTTGTTGCATTCTTTGTCAAAAGGTGGAGGAAGATCTGGATCATGTGACTATGTGCGTCTTTTGTGGGGC
CTCTTCTTTGATGCATTTGGGAAGCAGGTGTTAAGTTACTCAATTTATAGGGAGTTGATCAAGGAGTTCCTCCTCATGAGGGGAGATTTTTGTGGCAAGTTGGGATGTGT
GCTTTGTTTTGGAGTATTTGGGGGGAAAGAAATAATAAAGTGCTTAGGGGGTTGGAGAGAGGTTTGA
Protein sequenceShow/hide protein sequence
YSLNLLRLEKKQAILGNNLTQKEDKTLYQVIDNNSAEVASDQDTGLWQAILLATSGAILYEFLDGKLQVKGTSTAFFRSSWWGTVSRRRKFSGHYSLESSFGVFGEKGTT
AFSTTNSNLSTMLTWISGWGYVSSSFPFVFHEKPSVSDVFFQSGSYPLFSFGFRRALSDREMTDVMALLSLIEEFEFENGRRDSRPVLLHSLSKGGGRSGSCDYVRLLWG
LFFDAFGKQVLSYSIYRELIKEFLLMRGDFCGKLGCVLCFGVFGGKEIIKCLGGWREV