; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013559 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013559
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationscaffold1:14208559..14210549
RNA-Seq ExpressionSpg013559
SyntenySpg013559
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0051457 - maintenance of protein location in nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603645.1 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6760Show/hide
Query:  RTSYDSQEGRMKITRRRCTASRPRIG---------------------------------RNHVFLSLSQGENWLPVLCFHGFQPWNTSGFDVKKKRKLLI
        RTS DSQEG + I RRR  ASR  +G                                 +NH     S G        F GFQPW+T  FDVKKKRKLL 
Subjt:  RTSYDSQEGRMKITRRRCTASRPRIG---------------------------------RNHVFLSLSQGENWLPVLCFHGFQPWNTSGFDVKKKRKLLI

Query:  EQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCS
        EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +EE ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YGHEEDLLEFGSHGNSSI E CCS
Subjt:  EQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCS

Query:  PSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
         S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Subjt:  PSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
KAG7033829.1 hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-6574.58Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG
        F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+ KFNK  P +EE ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YG
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG

Query:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        HEEDLLEFGSHGNSSI E CCS S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Subjt:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
XP_022950730.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata]3.4e-6272.88Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG
        F  FQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P  +E ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YG
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG

Query:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        HEEDLLEFGSHGNSSI E  CS S Q+LLL  DS HDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Subjt:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
XP_022978296.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima]2.9e-6172.32Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGH
        F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +EE ES++T+MA     S EEVRIQG++DGIKD+L  +YGH
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGH

Query:  EEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        EEDLLEFGSHGNSSI E CCS S Q+LLL  DS HD FVLSSGRW+IDPEAESK + P IDQEFEQYFS +LPS DP
Subjt:  EEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
XP_023544624.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]5.3e-6374.01Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG
        F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +EE ES++T+MA E  +MS EEVRIQG++DGIKD L  +YG
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG

Query:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        HEEDLLEFG+HGNSSI E CCS S Q+LLL  DSKHDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LP  DP
Subjt:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
TrEMBL top hitse value%identityAlignment
A0A0A0KZL8 Uncharacterized protein4.1e-5364.36Show/hide
Query:  HGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEE-------------EESNVTRMAIE--VEMSKEEVRIQGKRD
        HG Q WNT   DVK KR+LLI+QLSLPT KLP WGP S S PHG DNFKFN + PQEEE             EES +T++AI+   EMS+E+VR+QG   
Subjt:  HGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEE-------------EESNVTRMAIE--VEMSKEEVRIQGKRD

Query:  GIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
          KD+LQ+SYGHEEDLLEFGS     I E CCS SAQ+LLL  DSK +FVLSSGRW++D E ESK IKPTIDQEFEQYFSVLLPS DP
Subjt:  GIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
A0A1S3BJU4 uncharacterized protein LOC1034903812.8e-5769.14Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHE
        FHGFQ WNT   DVKKKR+LLI+QLSLPT KLPCWG  S S PHG DNFKFNK    +E E S +T++ I+  EMS+E+VR+QG+    KD+LQ+SYGHE
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYGHE

Query:  EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        EDLLEFG+ G+S I E CCS SAQSLLL  DSK +FVLSSGRW++D E ESKT+KPTIDQEFEQYFSVLLPS DP
Subjt:  EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
A0A6J1CPJ7 uncharacterized protein LOC1110135563.0e-4363.43Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLI--EQLSLPTPKLPCWGPT-STSFPHGDNFKFNKNHPQE-EEEESNVTRMAIEV-EMSKEEVRIQGKRDGIKDELQRSY
        F GFQPWNT GFDVKKKRKLLI  EQLS PTPKLP WGPT S SFP+G NFKFN+N  ++ EEEE N+T+ A+EV E+SK E  ++         L  SY
Subjt:  FHGFQPWNTSGFDVKKKRKLLI--EQLSLPTPKLPCWGPT-STSFPHGDNFKFNKNHPQE-EEEESNVTRMAIEV-EMSKEEVRIQGKRDGIKDELQRSY

Query:  GHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDP--EAESKTIKPTIDQEFEQYFSVLL
        GH EDLLEFG     S DE C            DSKHDFVLSSGRW +DP  EAESKT+KPTIDQEFEQYFSVLL
Subjt:  GHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDP--EAESKTIKPTIDQEFEQYFSVLL
A0A6J1GGJ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like1.7e-6272.88Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG
        F  FQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P  +E ES++T+MA E  +MS EEVRIQG++DGIKD+L  +YG
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIE-VEMSKEEVRIQGKRDGIKDELQRSYG

Query:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        HEEDLLEFGSHGNSSI E  CS S Q+LLL  DS HDFVLSSGRW+IDPEAESK I PTIDQEFEQYFS +LPS DP
Subjt:  HEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
A0A6J1IMA5 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like1.4e-6172.32Show/hide
Query:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGH
        F GFQPW+T  FDVKKKRKLL EQLSLPTPKLPCWGP+S+  SFP+G D+FKFNK  P +EE ES++T+MA     S EEVRIQG++DGIKD+L  +YGH
Subjt:  FHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTST--SFPHG-DNFKFNKNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGH

Query:  EEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
        EEDLLEFGSHGNSSI E CCS S Q+LLL  DS HD FVLSSGRW+IDPEAESK + P IDQEFEQYFS +LPS DP
Subjt:  EEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHD-FVLSSGRWTIDPEAESKTIKPTIDQEFEQYFSVLLPSFDP
SwissProt top hitse value%identityAlignment
A8MR65 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE3.4e-0455.56Show/hide
Query:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL
        ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Subjt:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL
Q8S4Q6 Protein FAR-RED ELONGATED HYPOCOTYL 18.1e-0629.71Show/hide
Query:  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RMAIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE-------
        +V KKRK   +Q      LP  K  C+   + S     N + +  +       S  +     ++EM +E     G  K    +  L   YG +       
Subjt:  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RMAIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE-------

Query:  ---EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL
           E++L          D   CS +A            FVLSSGRWT+  D     +T KPTIDQEFEQYFS L+
Subjt:  ---EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL
Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 15.8e-0729.71Show/hide
Query:  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RMAIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE-------
        +V KKRK   +Q      LP  K  C+   + S     N + +  +       S  +     ++EM +E     G  K    +  L   YG +       
Subjt:  DVKKKRKLLIEQLS----LPTPKLPCWGPTSTSFPHGDNFKFNKNHPQEEEEESNVT-RMAIEVEMSKEEVRIQG--KRDGIKDELQRSYGHE-------

Query:  ---EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL
           E++L          D   CS +A            FVLSSGRWT+  D     +T KPTIDQEFEQYFS L+
Subjt:  ---EDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTI--DPEAESKTIKPTIDQEFEQYFSVLL
AT5G02200.1 far-red-elongated hypocotyl1-like2.4e-0555.56Show/hide
Query:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL
        ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Subjt:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL
AT5G02200.2 far-red-elongated hypocotyl1-like2.4e-0555.56Show/hide
Query:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL
        ++LSS RW++ + +++  T KPTIDQEFEQYFS L+
Subjt:  FVLSSGRWTI-DPEAESKTIKPTIDQEFEQYFSVLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCGTCAGAAGAAGGCAGTGAAAGGAAAGACGTGCCATCGCACATCCTACGACAGCCAAGAGGGTCGTATGAAGATAACACGACGTCGTTGCACTGCATCGAGGCC
ACGCATTGGAAGGAATCATGTCTTCCTTAGCCTCAGCCAGGGGGAAAATTGGCTTCCTGTGCTATGCTTCCATGGCTTTCAACCATGGAATACAAGCGGCTTTGATGTAA
AGAAGAAGAGAAAGCTGCTAATTGAGCAACTAAGCTTACCCACACCAAAGCTACCATGTTGGGGTCCAACATCAACTAGCTTTCCCCATGGAGATAACTTTAAGTTTAAC
AAAAACCATCCTCAAGAAGAAGAAGAAGAAAGCAATGTTACAAGAATGGCAATAGAAGTTGAGATGTCCAAAGAGGAGGTTCGAATTCAGGGTAAGAGAGATGGCATCAA
AGATGAGTTGCAGCGAAGCTATGGCCATGAGGAAGATCTGTTGGAGTTCGGAAGCCATGGAAATAGCAGCATTGATGAGCCATGTTGCAGTCCCAGTGCTCAAAGCTTGC
TCCTGTCTGGAGACTCCAAGCATGACTTTGTTTTGTCATCAGGGAGATGGACCATAGATCCAGAGGCAGAATCCAAGACTATCAAACCAACCATTGATCAAGAGTTTGAG
CAGTACTTTTCTGTGCTTTTGCCGTCCTTCGATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCGTCAGAAGAAGGCAGTGAAAGGAAAGACGTGCCATCGCACATCCTACGACAGCCAAGAGGGTCGTATGAAGATAACACGACGTCGTTGCACTGCATCGAGGCC
ACGCATTGGAAGGAATCATGTCTTCCTTAGCCTCAGCCAGGGGGAAAATTGGCTTCCTGTGCTATGCTTCCATGGCTTTCAACCATGGAATACAAGCGGCTTTGATGTAA
AGAAGAAGAGAAAGCTGCTAATTGAGCAACTAAGCTTACCCACACCAAAGCTACCATGTTGGGGTCCAACATCAACTAGCTTTCCCCATGGAGATAACTTTAAGTTTAAC
AAAAACCATCCTCAAGAAGAAGAAGAAGAAAGCAATGTTACAAGAATGGCAATAGAAGTTGAGATGTCCAAAGAGGAGGTTCGAATTCAGGGTAAGAGAGATGGCATCAA
AGATGAGTTGCAGCGAAGCTATGGCCATGAGGAAGATCTGTTGGAGTTCGGAAGCCATGGAAATAGCAGCATTGATGAGCCATGTTGCAGTCCCAGTGCTCAAAGCTTGC
TCCTGTCTGGAGACTCCAAGCATGACTTTGTTTTGTCATCAGGGAGATGGACCATAGATCCAGAGGCAGAATCCAAGACTATCAAACCAACCATTGATCAAGAGTTTGAG
CAGTACTTTTCTGTGCTTTTGCCGTCCTTCGATCCCTGA
Protein sequenceShow/hide protein sequence
MRRQKKAVKGKTCHRTSYDSQEGRMKITRRRCTASRPRIGRNHVFLSLSQGENWLPVLCFHGFQPWNTSGFDVKKKRKLLIEQLSLPTPKLPCWGPTSTSFPHGDNFKFN
KNHPQEEEEESNVTRMAIEVEMSKEEVRIQGKRDGIKDELQRSYGHEEDLLEFGSHGNSSIDEPCCSPSAQSLLLSGDSKHDFVLSSGRWTIDPEAESKTIKPTIDQEFE
QYFSVLLPSFDP