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Spg013588 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013588
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF616)
Genome locationscaffold2:24193778..24194552
RNA-Seq ExpressionSpg013588
SyntenySpg013588
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041274.1 uncharacterized protein E6C27_scaffold128G002610 [Cucumis melo var. makuwa]6.0e-0977.14Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRYSWRGKHTLS
        VHCGFM+NG AEM+P DIKYVKKCRY WRGKH  +
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRYSWRGKHTLS
KAA0055554.1 uncharacterized protein E6C27_scaffold222G00310 [Cucumis melo var. makuwa]2.6e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
XP_022989229.1 uncharacterized protein LOC111486372 isoform X1 [Cucurbita maxima]2.6e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
XP_022989232.1 uncharacterized protein LOC111486372 isoform X2 [Cucurbita maxima]2.6e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
XP_038880604.1 uncharacterized protein LOC120072248 [Benincasa hispida]2.0e-0484.62Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEMIP DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
TrEMBL top hitse value%identityAlignment
A0A1S3BSQ6 uncharacterized protein LOC1034928441.3e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
A0A5D3BNJ7 Uncharacterized protein1.3e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
A0A5D3CXJ6 Uncharacterized protein2.9e-0977.14Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRYSWRGKHTLS
        VHCGFM+NG AEM+P DIKYVKKCRY WRGKH  +
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRYSWRGKHTLS
A0A6J1JF89 uncharacterized protein LOC111486372 isoform X21.3e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
A0A6J1JJH1 uncharacterized protein LOC111486372 isoform X11.3e-0480.77Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM+NG AEM+P DIKYVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38500.1 Protein of unknown function (DUF616)1.2e-0465.38Show/hide
Query:  VHCGFMKNGWAEMIPVDIKYVKKCRY
        VHCGFM  G AEM  +D +YVKKCR+
Subjt:  VHCGFMKNGWAEMIPVDIKYVKKCRY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCATTGTGGTTTTATGAAAAATGGTTGGGCTGAAATGATTCCCGTTGATATCAAGTATGTCAAGAAGTGTAGATACTCGTGGCGTGGGAAGCATACCTTGAGCACCAT
CATAGTATCTAAGAAGAGGCTGATTCCAATAACCATGGAACCATGGAGTCCAGAGAAGAAAATCGTCATTGGTAAGTCATGA
mRNA sequenceShow/hide mRNA sequence
GTGCATTGTGGTTTTATGAAAAATGGTTGGGCTGAAATGATTCCCGTTGATATCAAGTATGTCAAGAAGTGTAGATACTCGTGGCGTGGGAAGCATACCTTGAGCACCAT
CATAGTATCTAAGAAGAGGCTGATTCCAATAACCATGGAACCATGGAGTCCAGAGAAGAAAATCGTCATTGGTAAGTCATGA
Protein sequenceShow/hide protein sequence
VHCGFMKNGWAEMIPVDIKYVKKCRYSWRGKHTLSTIIVSKKRLIPITMEPWSPEKKIVIGKS