; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg013616 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg013616
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein transport protein Sec61 subunit alpha-like
Genome locationscaffold3:37753756..37756248
RNA-Seq ExpressionSpg013616
SyntenySpg013616
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005048 - signal sequence binding (molecular function)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR002208 - SecY/SEC61-alpha family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8410248.1 hypothetical protein HHK36_002773 [Tetracentron sinense]5.8e-1557.83Show/hide
Query:  RVNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL
        +VNEAVV+ WLFFRY+VIGG A+ D   VS    + L+     I+F      G AYV LATVAGFIWWF+YSD+GPKL Y+EL
Subjt:  RVNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL

KAG7020613.1 Calcium-transporting ATPase 3, endoplasmic reticulum-type [Cucurbita argyrosperma subsp. argyrosperma]7.1e-2162.38Show/hide
Query:  RVNEAVVTRWLFFRYLVIGGRAMNDL--FLV--------SSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNL
        +VNEAVVT WLFFRYLVIGGRAMNDL  FL           ++C    +  +G KFLN  IIGAAYV LAT+AGFIWWFIYSDSGPKL Y E  L+S + 
Subjt:  RVNEAVVTRWLFFRYLVIGGRAMNDL--FLV--------SSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNL

Query:  C
        C
Subjt:  C

PTQ43246.1 hypothetical protein MARPO_0026s0117 [Marchantia polymorpha]3.2e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

XP_010647191.1 PREDICTED: protein transport protein Sec61 subunit alpha [Vitis vinifera]3.2e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

XP_028118409.1 protein transport protein Sec61 subunit alpha-like [Camellia sinensis]3.2e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

TrEMBL top hitse value%identityAlignment
A0A1S3TL35 protein transport protein Sec61 subunit alpha-like1.5e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

A0A6J1J053 protein transport protein Sec61 subunit alpha-like1.5e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

K4A9C7 Plug_translocon domain-containing protein1.5e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

K4A9D2 Plug_translocon domain-containing protein1.5e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

M5WHU9 Plug_translocon domain-containing protein1.5e-1388.64Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CENIIWKAFSPTTINSGRGAEFEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

SwissProt top hitse value%identityAlignment
Q2KHX4 Protein transport protein Sec61 subunit alpha isoform 26.7e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q8AY33 Protein transport protein Sec61 subunit alpha3.9e-1473.33Show/hide
Query:  LLSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        L++ N+CE I+WKAFSPTT+N+GRG EFEGA+IALFHLL T TDK
Subjt:  LLSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q90ZM2 Protein transport protein Sec61 subunit alpha-like 11.1e-1372.73Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTT+N+GRG EFEGA+IALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q9H9S3 Protein transport protein Sec61 subunit alpha isoform 26.7e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Q9JLR1 Protein transport protein Sec61 subunit alpha isoform 26.7e-1477.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

Arabidopsis top hitse value%identityAlignment
AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 32.6e-1348.19Show/hide
Query:  RVNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL
        +V EAVVT WLFFRYLVIG                                    YV LATVAGFIWWF+YSD GPKLTY+EL
Subjt:  RVNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTEL

AT1G29310.1 SecY protein transport family protein4.8e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT1G78720.1 SecY protein transport family protein2.5e-1684.09Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTINSGRGA+FEGAVIALFHLLIT TDK
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT2G34250.1 SecY protein transport family protein4.8e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK

AT2G34250.2 SecY protein transport family protein4.8e-1577.27Show/hide
Query:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK
        ++ N+CE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT ++K
Subjt:  LSLNLCENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACATTCATTGGGCTTTACATTGCAAACTATGTGGTGGAGCGCTCAACAGGGTGAATGAAGCTGTGGTGACTAGGTGGTTGTTCTTCCGTTATTTGGTAATTGG
AGGTAGGGCAATGAATGACCTATTCTTGGTTTCTTCCATGGAATGTTTGTTGCTAGATATCTATGGCTCCGGTATAAAGTTTTTGAATGATGGTATCATTGGTGCAGCTT
ATGTTAGTCTTGCAACAGTTGCTGGCTTCATATGGTGGTTTATATACTCTGACAGTGGTCCTAAGCTAACTTACACCGAGTTGTTCTTACTCTCATTGAACCTATGTGAG
AACATTATCTGGAAGGCATTTAGTCCAACCACCATTAACAGTGGAAGAGGAGCTGAATTTGAAGGAGCTGTCATTGCATTGTTCCATCTGTTGATTACCATAACAGACAA
G
mRNA sequenceShow/hide mRNA sequence
ATGGACTACATTCATTGGGCTTTACATTGCAAACTATGTGGTGGAGCGCTCAACAGGGTGAATGAAGCTGTGGTGACTAGGTGGTTGTTCTTCCGTTATTTGGTAATTGG
AGGTAGGGCAATGAATGACCTATTCTTGGTTTCTTCCATGGAATGTTTGTTGCTAGATATCTATGGCTCCGGTATAAAGTTTTTGAATGATGGTATCATTGGTGCAGCTT
ATGTTAGTCTTGCAACAGTTGCTGGCTTCATATGGTGGTTTATATACTCTGACAGTGGTCCTAAGCTAACTTACACCGAGTTGTTCTTACTCTCATTGAACCTATGTGAG
AACATTATCTGGAAGGCATTTAGTCCAACCACCATTAACAGTGGAAGAGGAGCTGAATTTGAAGGAGCTGTCATTGCATTGTTCCATCTGTTGATTACCATAACAGACAA
G
Protein sequenceShow/hide protein sequence
MDYIHWALHCKLCGGALNRVNEAVVTRWLFFRYLVIGGRAMNDLFLVSSMECLLLDIYGSGIKFLNDGIIGAAYVSLATVAGFIWWFIYSDSGPKLTYTELFLLSLNLCE
NIIWKAFSPTTINSGRGAEFEGAVIALFHLLITITDK